RNA–Protein interactions for RNA: ENST00000490557.1

HMGB1P38-201, Transcript of high mobility group box 1 pseudogene 38, humanhuman

BASIC

Gene HMGB1P38, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P38-201ENST00000490557 ANXA1P04083 346 aa6.17□□□□□ -1.42
HMGB1P38-201ENST00000490557 C1SP09871 688 aa6.17□□□□□ -1.42
HMGB1P38-201ENST00000490557 PRDX5P30044 214 aa6.17□□□□□ -1.42
HMGB1P38-201ENST00000490557 FOXE3Q13461 319 aa6.17□□□□□ -1.42
HMGB1P38-201ENST00000490557 FGL2Q14314 439 aa6.17□□□□□ -1.42
HMGB1P38-201ENST00000490557 PLS1Q14651 629 aa6.17□□□□□ -1.42
HMGB1P38-201ENST00000490557 SPDYE7PQ495Y7 208 aa6.17□□□□□ -1.42
HMGB1P38-201ENST00000490557 PDCD4Q53EL6 469 aaKnown RBP6.17□□□□□ -1.42
HMGB1P38-201ENST00000490557 AGAP9Q5VTM2 703 aa6.17□□□□□ -1.42
HMGB1P38-201ENST00000490557 PNKPQ96T60 521 aa6.17□□□□□ -1.42
HMGB1P38-201ENST00000490557 C1orf43Q9BWL3 253 aa6.17□□□□□ -1.42
HMGB1P38-201ENST00000490557 CEP72Q9P209 647 aa6.17□□□□□ -1.42
HMGB1P38-201ENST00000490557 CPA4Q9UI42 421 aa6.17□□□□□ -1.42
HMGB1P38-201ENST00000490557 MTO1Q9Y2Z2 717 aaKnown RBP6.17□□□□□ -1.42
HMGB1P38-201ENST00000490557 FPGT-TNNI3KV9GXZ4 949 aa6.17□□□□□ -1.42
HMGB1P38-201ENST00000490557 A0A1B0GTW7 788 aa6.16□□□□□ -1.42
HMGB1P38-201ENST00000490557 GAGE12BA1L429 117 aa6.16□□□□□ -1.42
HMGB1P38-201ENST00000490557 GAGE12HA6NDE8 117 aa6.16□□□□□ -1.42
HMGB1P38-201ENST00000490557 FAM227AF5H4B4 570 aa6.16□□□□□ -1.42
HMGB1P38-201ENST00000490557 ZNF185O15231 689 aa6.16□□□□□ -1.42
HMGB1P38-201ENST00000490557 GPANK1O95872 356 aa6.16□□□□□ -1.42
HMGB1P38-201ENST00000490557 GJB1P08034 283 aa6.16□□□□□ -1.42
HMGB1P38-201ENST00000490557 GCSHP23434 173 aa6.16□□□□□ -1.42
HMGB1P38-201ENST00000490557 PHKA1P46020 1223 aa6.16□□□□□ -1.42
HMGB1P38-201ENST00000490557 KCNJ5P48544 419 aa6.16□□□□□ -1.42
HMGB1P38-201ENST00000490557 PSMC1P62191 440 aaKnown RBP6.16□□□□□ -1.42
HMGB1P38-201ENST00000490557 NOMO3P69849 1222 aa6.16□□□□□ -1.42
HMGB1P38-201ENST00000490557 TUBA3CQ13748 450 aa6.16□□□□□ -1.42
HMGB1P38-201ENST00000490557 PUM1Q14671 1186 aaKnown RBP eCLIP6.16□□□□□ -1.42
HMGB1P38-201ENST00000490557 ANO6Q4KMQ2 910 aa6.16□□□□□ -1.42
HMGB1P38-201ENST00000490557 KHDC1LQ5JSQ8 128 aa6.16□□□□□ -1.42
HMGB1P38-201ENST00000490557 TUBA3EQ6PEY2 450 aa6.16□□□□□ -1.42
HMGB1P38-201ENST00000490557 SLC17A8Q8NDX2 589 aa6.16□□□□□ -1.42
HMGB1P38-201ENST00000490557 IMPG2Q9BZV3 1241 aa6.16□□□□□ -1.42
HMGB1P38-201ENST00000490557 VPS11Q9H270 941 aa6.16□□□□□ -1.42
HMGB1P38-201ENST00000490557 AKIP1Q9NQ31 210 aa6.16□□□□□ -1.42
HMGB1P38-201ENST00000490557 RLIMQ9NVW2 624 aa6.16□□□□□ -1.42
HMGB1P38-201ENST00000490557 OBP2AQ9NY56 170 aa6.16□□□□□ -1.42
HMGB1P38-201ENST00000490557 GABBR1Q9UBS5 961 aa6.16□□□□□ -1.42
HMGB1P38-201ENST00000490557 CDYLQ9Y232 598 aa6.16□□□□□ -1.42
HMGB1P38-201ENST00000490557 MYRFQ9Y2G1 1151 aa6.16□□□□□ -1.42
HMGB1P38-201ENST00000490557 NOX1Q9Y5S8 564 aa6.16□□□□□ -1.42
HMGB1P38-201ENST00000490557 FRMPD2Q68DX3 1309 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P38-201ENST00000490557 KRTAP9-7A8MTY7 169 aa6.15□□□□□ -1.42
HMGB1P38-201ENST00000490557 GRXCR1A8MXD5 290 aa6.15□□□□□ -1.42
HMGB1P38-201ENST00000490557 PLSCR1O15162 318 aa6.15□□□□□ -1.42
HMGB1P38-201ENST00000490557 TUSC2O75896 110 aa6.15□□□□□ -1.42
HMGB1P38-201ENST00000490557 NCR1O76036 304 aa6.15□□□□□ -1.42
HMGB1P38-201ENST00000490557 PEX11BO96011 259 aa6.15□□□□□ -1.42
HMGB1P38-201ENST00000490557 LAG3P18627 525 aa6.15□□□□□ -1.42
HMGB1P38-201ENST00000490557 SLC6A4P31645 630 aa6.15□□□□□ -1.42
HMGB1P38-201ENST00000490557 PTGS2P35354 604 aa6.15□□□□□ -1.42
HMGB1P38-201ENST00000490557 RAB1AP62820 205 aa6.15□□□□□ -1.42
HMGB1P38-201ENST00000490557 NKX6-1P78426 367 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P38-201ENST00000490557 ZNF844Q08AG5 666 aa6.15□□□□□ -1.42
HMGB1P38-201ENST00000490557 ZXDCQ2QGD7 858 aaPredicted RBP6.15□□□□□ -1.42
HMGB1P38-201ENST00000490557 LSM12Q3MHD2 195 aaKnown RBP6.15□□□□□ -1.42
HMGB1P38-201ENST00000490557 TIGD2Q4W5G0 525 aa6.15□□□□□ -1.42
HMGB1P38-201ENST00000490557 NOMO2Q5JPE7 1267 aa6.15□□□□□ -1.42
HMGB1P38-201ENST00000490557 CCDC149Q6ZUS6 474 aa6.15□□□□□ -1.42
HMGB1P38-201ENST00000490557 OVCH2Q7RTZ1 564 aa6.15□□□□□ -1.42
HMGB1P38-201ENST00000490557 PDSS2Q86YH6 399 aa6.15□□□□□ -1.42
HMGB1P38-201ENST00000490557 MAPKAPK5Q8IW41 473 aa6.15□□□□□ -1.42
HMGB1P38-201ENST00000490557 PCSK9Q8NBP7 692 aaKnown RBP6.15□□□□□ -1.42
HMGB1P38-201ENST00000490557 CACTINQ8WUQ7 758 aaKnown RBP6.15□□□□□ -1.42
HMGB1P38-201ENST00000490557 MARS2Q96GW9 593 aaKnown RBP6.15□□□□□ -1.42
HMGB1P38-201ENST00000490557 C8orf48Q96LL4 319 aa6.15□□□□□ -1.42
HMGB1P38-201ENST00000490557 ZSWIM1Q9BR11 485 aa6.15□□□□□ -1.42
HMGB1P38-201ENST00000490557 B3GNT5Q9BYG0 378 aa6.15□□□□□ -1.42
HMGB1P38-201ENST00000490557 SIK2Q9H0K1 926 aa6.15□□□□□ -1.42
HMGB1P38-201ENST00000490557 MRPL46Q9H2W6 279 aaKnown RBP6.15□□□□□ -1.42
HMGB1P38-201ENST00000490557 NRDE2Q9H7Z3 1164 aa6.15□□□□□ -1.42
HMGB1P38-201ENST00000490557 KLHL11Q9NVR0 708 aa6.15□□□□□ -1.42
HMGB1P38-201ENST00000490557 STAP2Q9UGK3 403 aa6.15□□□□□ -1.42
HMGB1P38-201ENST00000490557 ZDHHC8Q9ULC8 765 aa6.15□□□□□ -1.42
HMGB1P38-201ENST00000490557 PCDHA6Q9UN73 950 aa6.15□□□□□ -1.42
HMGB1P38-201ENST00000490557 CHST2Q9Y4C5 530 aa6.15□□□□□ -1.42
HMGB1P38-201ENST00000490557 A0A088AWK7 358 aa6.14□□□□□ -1.43
HMGB1P38-201ENST00000490557 A0A1W2PPL8 197 aa6.14□□□□□ -1.43
HMGB1P38-201ENST00000490557 CAPN8A6NHC0 703 aa6.14□□□□□ -1.43
HMGB1P38-201ENST00000490557 ZNF785A8K8V0 405 aa6.14□□□□□ -1.43
HMGB1P38-201ENST00000490557 AHRRA9YTQ3 701 aa6.14□□□□□ -1.43
HMGB1P38-201ENST00000490557 KIF3BO15066 747 aa6.14□□□□□ -1.43
HMGB1P38-201ENST00000490557 PRSS23O95084 383 aa6.14□□□□□ -1.43
HMGB1P38-201ENST00000490557 NDUFA10O95299 355 aa6.14□□□□□ -1.43
HMGB1P38-201ENST00000490557 AHSGP02765 367 aa6.14□□□□□ -1.43
HMGB1P38-201ENST00000490557 RARBP10826 455 aa6.14□□□□□ -1.43
HMGB1P38-201ENST00000490557 HSD11B2P80365 405 aa6.14□□□□□ -1.43
HMGB1P38-201ENST00000490557 GPSM2P81274 684 aa6.14□□□□□ -1.43
HMGB1P38-201ENST00000490557 DGCR2P98153 550 aa6.14□□□□□ -1.43
HMGB1P38-201ENST00000490557 PIGFQ07326 219 aa6.14□□□□□ -1.43
HMGB1P38-201ENST00000490557 LLGL1Q15334 1064 aa6.14□□□□□ -1.43
HMGB1P38-201ENST00000490557 NPNTQ6UXI9 565 aa6.14□□□□□ -1.43
HMGB1P38-201ENST00000490557 PPP1R3BQ86XI6 285 aa6.14□□□□□ -1.43
HMGB1P38-201ENST00000490557 FAM90A1Q86YD7 464 aa6.14□□□□□ -1.43
HMGB1P38-201ENST00000490557 ZFPM1Q8IX07 1006 aa6.14□□□□□ -1.43
HMGB1P38-201ENST00000490557 HAS1Q92839 578 aa6.14□□□□□ -1.43
HMGB1P38-201ENST00000490557 SCAMP4Q969E2 229 aa6.14□□□□□ -1.43
HMGB1P38-201ENST00000490557 ZNF503Q96F45 646 aa6.14□□□□□ -1.43
HMGB1P38-201ENST00000490557 NEU1Q99519 415 aa6.14□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 965.5 ms