RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 C9orf57Q5W0N0 161 aa11.98□□□□□ -0.49
CPSF7-212ENST00000489728 ELMSAN1Q6PJG2 1045 aa11.98□□□□□ -0.49
CPSF7-212ENST00000489728 CD300LGQ6UXG3 332 aa11.98□□□□□ -0.49
CPSF7-212ENST00000489728 ANKS3Q6ZW76 656 aa11.98□□□□□ -0.49
CPSF7-212ENST00000489728 ADGRD2Q7Z7M1 963 aa11.98□□□□□ -0.49
CPSF7-212ENST00000489728 ZSWIM2Q8NEG5 633 aa11.98□□□□□ -0.49
CPSF7-212ENST00000489728 APPL2Q8NEU8 664 aa11.98□□□□□ -0.49
CPSF7-212ENST00000489728 TMC2Q8TDI7 906 aa11.98□□□□□ -0.49
CPSF7-212ENST00000489728 HASPINQ8TF76 798 aa11.98□□□□□ -0.49
CPSF7-212ENST00000489728 ATXN2LQ8WWM7 1075 aaKnown RBP11.98□□□□□ -0.49
CPSF7-212ENST00000489728 ANKRD36BP1Q96IX9 119 aa11.98□□□□□ -0.49
CPSF7-212ENST00000489728 FNBP1Q96RU3 617 aa11.98□□□□□ -0.49
CPSF7-212ENST00000489728 CGRRF1Q99675 332 aa11.98□□□□□ -0.49
CPSF7-212ENST00000489728 TSG101Q99816 390 aa11.98□□□□□ -0.49
CPSF7-212ENST00000489728 MKNK1Q9BUB5 465 aa11.98□□□□□ -0.49
CPSF7-212ENST00000489728 NUP62CLQ9H1M0 184 aa11.98□□□□□ -0.49
CPSF7-212ENST00000489728 UBE2ZQ9H832 354 aaPredicted RBP11.98□□□□□ -0.49
CPSF7-212ENST00000489728 PDE11AQ9HCR9 933 aa11.98□□□□□ -0.49
CPSF7-212ENST00000489728 INTS13Q9NVM9 706 aa11.98□□□□□ -0.49
CPSF7-212ENST00000489728 CACNG4Q9UBN1 327 aa11.98□□□□□ -0.49
CPSF7-212ENST00000489728 PCDHB8Q9UN66 801 aa11.98□□□□□ -0.49
CPSF7-212ENST00000489728 BACE2Q9Y5Z0 518 aa11.98□□□□□ -0.49
CPSF7-212ENST00000489728 PRUNE2Q8WUY3 3088 aa11.97□□□□□ -0.49
CPSF7-212ENST00000489728 BICDL2A1A5D9 508 aa11.97□□□□□ -0.49
CPSF7-212ENST00000489728 PSMC2P35998 433 aaKnown RBP11.97□□□□□ -0.49
CPSF7-212ENST00000489728 TAF6P49848 677 aa11.97□□□□□ -0.49
CPSF7-212ENST00000489728 TFAMQ00059 246 aaKnown RBP11.97□□□□□ -0.49
CPSF7-212ENST00000489728 FKBP3Q00688 224 aaKnown RBP11.97□□□□□ -0.49
CPSF7-212ENST00000489728 SPAG1Q07617 926 aa11.97□□□□□ -0.49
CPSF7-212ENST00000489728 PUS10Q3MIT2 529 aaKnown RBP11.97□□□□□ -0.49
CPSF7-212ENST00000489728 SV2CQ496J9 727 aa11.97□□□□□ -0.49
CPSF7-212ENST00000489728 RTP2Q5QGT7 225 aa11.97□□□□□ -0.49
CPSF7-212ENST00000489728 INTS8Q75QN2 995 aaKnown RBP11.97□□□□□ -0.49
CPSF7-212ENST00000489728 TAS1R1Q7RTX1 841 aa11.97□□□□□ -0.49
CPSF7-212ENST00000489728 ZC3H3Q8IXZ2 948 aaKnown RBP11.97□□□□□ -0.49
CPSF7-212ENST00000489728 SMYD4Q8IYR2 804 aaPredicted RBP11.97□□□□□ -0.49
CPSF7-212ENST00000489728 C1orf127Q8N9H9 656 aa11.97□□□□□ -0.49
CPSF7-212ENST00000489728 SPATA18Q8TC71 538 aa11.97□□□□□ -0.49
CPSF7-212ENST00000489728 NOC3LQ8WTT2 800 aaKnown RBP11.97□□□□□ -0.49
CPSF7-212ENST00000489728 HDAC7Q8WUI4 952 aa11.97□□□□□ -0.49
CPSF7-212ENST00000489728 PPM1EQ8WY54 764 aa11.97□□□□□ -0.49
CPSF7-212ENST00000489728 RIN2Q8WYP3 895 aaPredicted RBP11.97□□□□□ -0.49
CPSF7-212ENST00000489728 RABGGTAQ92696 567 aa11.97□□□□□ -0.49
CPSF7-212ENST00000489728 CASP10Q92851 521 aa11.97□□□□□ -0.49
CPSF7-212ENST00000489728 DZANK1Q9NVP4 752 aa11.97□□□□□ -0.49
CPSF7-212ENST00000489728 MTRRQ9UBK8 725 aa11.97□□□□□ -0.49
CPSF7-212ENST00000489728 DSEQ9UL01 958 aa11.97□□□□□ -0.49
CPSF7-212ENST00000489728 MAPK8IP1Q9UQF2 711 aa11.97□□□□□ -0.49
CPSF7-212ENST00000489728 PCDHGC5Q9Y5F6 944 aa11.97□□□□□ -0.49
CPSF7-212ENST00000489728 VWA8A3KMH1 1905 aa11.96□□□□□ -0.49
CPSF7-212ENST00000489728 H7C4K7 107 aa11.96□□□□□ -0.49
CPSF7-212ENST00000489728 IKBKBO14920 756 aa11.96□□□□□ -0.49
CPSF7-212ENST00000489728 CETN3O15182 167 aa11.96□□□□□ -0.49
CPSF7-212ENST00000489728 SLC16A3O15427 465 aaKnown RBP11.96□□□□□ -0.49
CPSF7-212ENST00000489728 CLASP2O75122 1294 aaKnown RBP11.96□□□□□ -0.49
CPSF7-212ENST00000489728 CYP11A1P05108 521 aa11.96□□□□□ -0.49
CPSF7-212ENST00000489728 CNPP09543 421 aaKnown RBP11.96□□□□□ -0.49
CPSF7-212ENST00000489728 HOXB8P17481 243 aaPredicted RBP11.96□□□□□ -0.49
CPSF7-212ENST00000489728 TYMPP19971 482 aa11.96□□□□□ -0.49
CPSF7-212ENST00000489728 PTMSP20962 102 aa11.96□□□□□ -0.49
CPSF7-212ENST00000489728 CCNE1P24864 410 aa11.96□□□□□ -0.49
CPSF7-212ENST00000489728 CLCN4P51793 760 aa11.96□□□□□ -0.49
CPSF7-212ENST00000489728 WNT7BP56706 349 aa11.96□□□□□ -0.49
CPSF7-212ENST00000489728 LILRA4P59901 499 aa11.96□□□□□ -0.49
CPSF7-212ENST00000489728 RBP5P82980 135 aa11.96□□□□□ -0.49
CPSF7-212ENST00000489728 PSMD5Q16401 504 aa11.96□□□□□ -0.49
CPSF7-212ENST00000489728 LEXMQ3ZCV2 418 aa11.96□□□□□ -0.49
CPSF7-212ENST00000489728 RTL10Q7L3V2 364 aa11.96□□□□□ -0.49
CPSF7-212ENST00000489728 MLKLQ8NB16 471 aa11.96□□□□□ -0.49
CPSF7-212ENST00000489728 CXorf38Q8TB03 319 aa11.96□□□□□ -0.49
CPSF7-212ENST00000489728 LNX1Q8TBB1 728 aaPredicted RBP11.96□□□□□ -0.49
CPSF7-212ENST00000489728 PARD3BQ8TEW8 1205 aa11.96□□□□□ -0.49
CPSF7-212ENST00000489728 SLC22A17Q8WUG5 538 aa11.96□□□□□ -0.49
CPSF7-212ENST00000489728 ERCC4Q92889 916 aaPredicted RBP11.96□□□□□ -0.49
CPSF7-212ENST00000489728 KLHL5Q96PQ7 755 aa11.96□□□□□ -0.49
CPSF7-212ENST00000489728 MTMR12Q9C0I1 747 aa11.96□□□□□ -0.49
CPSF7-212ENST00000489728 CLDND1Q9NY35 253 aa11.96□□□□□ -0.49
CPSF7-212ENST00000489728 R3HCC1Q9Y3T6 440 aaKnown RBP11.96□□□□□ -0.49
CPSF7-212ENST00000489728 MYO7AQ13402 2215 aa11.95□□□□□ -0.5
CPSF7-212ENST00000489728 TEX28O15482 410 aa11.95□□□□□ -0.5
CPSF7-212ENST00000489728 OAZ2O95190 189 aa11.95□□□□□ -0.5
CPSF7-212ENST00000489728 CSPG5O95196 566 aa11.95□□□□□ -0.5
CPSF7-212ENST00000489728 STAU1O95793 577 aaKnown RBP11.95□□□□□ -0.5
CPSF7-212ENST00000489728 GLP2RO95838 553 aa11.95□□□□□ -0.5
CPSF7-212ENST00000489728 ITGB3P05106 788 aa11.95□□□□□ -0.5
CPSF7-212ENST00000489728 DLATP10515 647 aaKnown RBP11.95□□□□□ -0.5
CPSF7-212ENST00000489728 ODC1P11926 461 aa11.95□□□□□ -0.5
CPSF7-212ENST00000489728 KRT13P13646 458 aa11.95□□□□□ -0.5
CPSF7-212ENST00000489728 TNNI1P19237 187 aa11.95□□□□□ -0.5
CPSF7-212ENST00000489728 BMP6P22004 513 aa11.95□□□□□ -0.5
CPSF7-212ENST00000489728 KLRC2P26717 231 aa11.95□□□□□ -0.5
CPSF7-212ENST00000489728 TKTP29401 623 aaKnown RBP11.95□□□□□ -0.5
CPSF7-212ENST00000489728 CA8P35219 290 aa11.95□□□□□ -0.5
CPSF7-212ENST00000489728 BRCC3P46736 316 aa11.95□□□□□ -0.5
CPSF7-212ENST00000489728 GUCY2FP51841 1108 aa11.95□□□□□ -0.5
CPSF7-212ENST00000489728 MRPS5P82675 430 aaKnown RBP11.95□□□□□ -0.5
CPSF7-212ENST00000489728 MYO1EQ12965 1108 aa11.95□□□□□ -0.5
CPSF7-212ENST00000489728 ADAM9Q13443 819 aa11.95□□□□□ -0.5
CPSF7-212ENST00000489728 MRPL58Q14197 206 aaKnown RBP11.95□□□□□ -0.5
CPSF7-212ENST00000489728 CAMK4Q16566 473 aa11.95□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms