RNA–Protein interactions for RNA: ENST00000450940.5

USP40-207, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 3

Gene USP40, Length 670 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-207ENST00000450940 LAMP2P13473 410 aa21.09■□□□□ 0.97
USP40-207ENST00000450940 GBP2P32456 591 aaPredicted RBP21.09■□□□□ 0.97
USP40-207ENST00000450940 STAT6P42226 847 aa21.09■□□□□ 0.97
USP40-207ENST00000450940 ROR1Q01973 937 aa21.09■□□□□ 0.97
USP40-207ENST00000450940 SPAG1Q07617 926 aa21.09■□□□□ 0.97
USP40-207ENST00000450940 SPATA1Q5VX52 437 aa21.09■□□□□ 0.97
USP40-207ENST00000450940 SUGP1Q8IWZ8 645 aaKnown RBP21.09■□□□□ 0.97
USP40-207ENST00000450940 APPL2Q8NEU8 664 aa21.09■□□□□ 0.97
USP40-207ENST00000450940 SLC7A14Q8TBB6 771 aa21.09■□□□□ 0.97
USP40-207ENST00000450940 PCDHB8Q9UN66 801 aa21.09■□□□□ 0.97
USP40-207ENST00000450940 DERAQ9Y315 318 aa21.09■□□□□ 0.97
USP40-207ENST00000450940 GTF3C3Q9Y5Q9 886 aa21.09■□□□□ 0.97
USP40-207ENST00000450940 ZFP37Q9Y6Q3 630 aaPredicted RBP21.09■□□□□ 0.97
USP40-207ENST00000450940 TISP43B9A030 160 aa21.08■□□□□ 0.97
USP40-207ENST00000450940 XYLBO75191 536 aa21.08■□□□□ 0.97
USP40-207ENST00000450940 ZSCAN22P10073 491 aaPredicted RBP21.08■□□□□ 0.97
USP40-207ENST00000450940 MCM4P33991 863 aa21.08■□□□□ 0.97
USP40-207ENST00000450940 E2F4Q16254 413 aa21.08■□□□□ 0.97
USP40-207ENST00000450940 GRASPQ7Z6J2 395 aaPredicted RBP21.08■□□□□ 0.97
USP40-207ENST00000450940 ASB7Q9H672 318 aa21.08■□□□□ 0.97
USP40-207ENST00000450940 MRPL44Q9H9J2 332 aaKnown RBP21.08■□□□□ 0.97
USP40-207ENST00000450940 FBXL5Q9UKA1 691 aa21.08■□□□□ 0.97
USP40-207ENST00000450940 AGO2Q9UKV8 859 aaKnown RBP21.08■□□□□ 0.97
USP40-207ENST00000450940 ARHGEF37A1IGU5 675 aa21.07■□□□□ 0.96
USP40-207ENST00000450940 WDR27A2RRH5 827 aa21.07■□□□□ 0.96
USP40-207ENST00000450940 CUTAO60888 179 aa21.07■□□□□ 0.96
USP40-207ENST00000450940 OAZ2O95190 189 aa21.07■□□□□ 0.96
USP40-207ENST00000450940 ATF2P15336 505 aa21.07■□□□□ 0.96
USP40-207ENST00000450940 PAX3P23760 479 aa21.07■□□□□ 0.96
USP40-207ENST00000450940 FSHRP23945 695 aa21.07■□□□□ 0.96
USP40-207ENST00000450940 ADSSP30520 456 aa21.07■□□□□ 0.96
USP40-207ENST00000450940 POSTNQ15063 836 aa21.07■□□□□ 0.96
USP40-207ENST00000450940 TPGS2Q68CL5 300 aa21.07■□□□□ 0.96
USP40-207ENST00000450940 ADALQ6DHV7 355 aa21.07■□□□□ 0.96
USP40-207ENST00000450940 TCEAL8Q8IYN2 117 aa21.07■□□□□ 0.96
USP40-207ENST00000450940 TMEM130Q8N3G9 435 aa21.07■□□□□ 0.96
USP40-207ENST00000450940 MAFFQ9ULX9 164 aa21.07■□□□□ 0.96
USP40-207ENST00000450940 DUSP12Q9UNI6 340 aa21.07■□□□□ 0.96
USP40-207ENST00000450940 ANHXE9PGG2 379 aa21.06■□□□□ 0.96
USP40-207ENST00000450940 CCL16O15467 120 aa21.06■□□□□ 0.96
USP40-207ENST00000450940 F13A1P00488 732 aa21.06■□□□□ 0.96
USP40-207ENST00000450940 PDGFBP01127 241 aaPredicted RBP21.06■□□□□ 0.96
USP40-207ENST00000450940 ACOT2P49753 483 aa21.06■□□□□ 0.96
USP40-207ENST00000450940 NTHL1P78549 312 aa21.06■□□□□ 0.96
USP40-207ENST00000450940 KCNA1Q09470 495 aa21.06■□□□□ 0.96
USP40-207ENST00000450940 ALCAMQ13740 583 aa21.06■□□□□ 0.96
USP40-207ENST00000450940 CTXN3Q4LDR2 81 aa21.06■□□□□ 0.96
USP40-207ENST00000450940 L1TD1Q5T7N2 865 aaKnown RBP21.06■□□□□ 0.96
USP40-207ENST00000450940 ATL3Q6DD88 541 aa21.06■□□□□ 0.96
USP40-207ENST00000450940 JADE1Q6IE81 842 aa21.06■□□□□ 0.96
USP40-207ENST00000450940 CRELD2Q6UXH1 353 aaPredicted RBP21.06■□□□□ 0.96
USP40-207ENST00000450940 PDILTQ8N807 584 aa21.06■□□□□ 0.96
USP40-207ENST00000450940 OXCT2Q9BYC2 517 aaPredicted RBP21.06■□□□□ 0.96
USP40-207ENST00000450940 IKZF4Q9H2S9 585 aa21.06■□□□□ 0.96
USP40-207ENST00000450940 CUEDC2Q9H467 287 aa21.06■□□□□ 0.96
USP40-207ENST00000450940 KBTBD4Q9NVX7 518 aa21.06■□□□□ 0.96
USP40-207ENST00000450940 PCDHB13Q9Y5F0 798 aa21.06■□□□□ 0.96
USP40-207ENST00000450940 HSP90AA1P07900 732 aaKnown RBP21.05■□□□□ 0.96
USP40-207ENST00000450940 AVPR2P30518 371 aa21.05■□□□□ 0.96
USP40-207ENST00000450940 GUCY2FP51841 1108 aa21.05■□□□□ 0.96
USP40-207ENST00000450940 IER5LQ5T953 404 aa21.05■□□□□ 0.96
USP40-207ENST00000450940 ZNF280DQ6N043 979 aa21.05■□□□□ 0.96
USP40-207ENST00000450940 SHC4Q6S5L8 630 aa21.05■□□□□ 0.96
USP40-207ENST00000450940 GET4Q7L5D6 327 aaPredicted RBP21.05■□□□□ 0.96
USP40-207ENST00000450940 SLC44A3Q8N4M1 653 aa21.05■□□□□ 0.96
USP40-207ENST00000450940 BEST2Q8NFU1 509 aa21.05■□□□□ 0.96
USP40-207ENST00000450940 ACCSQ96QU6 501 aa21.05■□□□□ 0.96
USP40-207ENST00000450940 PRRX2Q99811 253 aa21.05■□□□□ 0.96
USP40-207ENST00000450940 TNMDQ9H2S6 317 aa21.05■□□□□ 0.96
USP40-207ENST00000450940 AVENQ9NQS1 362 aaPredicted RBP21.05■□□□□ 0.96
USP40-207ENST00000450940 PANK4Q9NVE7 773 aa21.05■□□□□ 0.96
USP40-207ENST00000450940 TBC1D7Q9P0N9 293 aa21.05■□□□□ 0.96
USP40-207ENST00000450940 DNMT3BQ9UBC3 853 aaKnown RBP21.05■□□□□ 0.96
USP40-207ENST00000450940 CDH7Q9ULB5 785 aa21.05■□□□□ 0.96
USP40-207ENST00000450940 KCNH3Q9ULD8 1083 aa21.05■□□□□ 0.96
USP40-207ENST00000450940 EXOC7Q9UPT5 735 aa21.05■□□□□ 0.96
USP40-207ENST00000450940 C2CD2Q9Y426 696 aa21.05■□□□□ 0.96
USP40-207ENST00000450940 SCN1AP35498 2009 aa21.05■□□□□ 0.96
USP40-207ENST00000450940 ANO9A1A5B4 782 aa21.04■□□□□ 0.96
USP40-207ENST00000450940 PIRO00625 290 aa21.04■□□□□ 0.96
USP40-207ENST00000450940 NFICP08651 508 aa21.04■□□□□ 0.96
USP40-207ENST00000450940 IDEP14735 1019 aa21.04■□□□□ 0.96
USP40-207ENST00000450940 CASP5P51878 434 aa21.04■□□□□ 0.96
USP40-207ENST00000450940 VCPP55072 806 aaKnown RBP21.04■□□□□ 0.96
USP40-207ENST00000450940 LILRA4P59901 499 aa21.04■□□□□ 0.96
USP40-207ENST00000450940 HTR4Q13639 388 aa21.04■□□□□ 0.96
USP40-207ENST00000450940 TMEM132DQ14C87 1099 aa21.04■□□□□ 0.96
USP40-207ENST00000450940 CNNM4Q6P4Q7 775 aa21.04■□□□□ 0.96
USP40-207ENST00000450940 RSAD2Q8WXG1 361 aa21.04■□□□□ 0.96
USP40-207ENST00000450940 POMGNT1Q8WZA1 660 aa21.04■□□□□ 0.96
USP40-207ENST00000450940 LRRC27Q9C0I9 530 aa21.04■□□□□ 0.96
USP40-207ENST00000450940 PPEF2O14830 753 aa21.03■□□□□ 0.96
USP40-207ENST00000450940 GCNT3O95395 438 aa21.03■□□□□ 0.96
USP40-207ENST00000450940 SEC24AO95486 1093 aa21.03■□□□□ 0.96
USP40-207ENST00000450940 TYMPP19971 482 aa21.03■□□□□ 0.96
USP40-207ENST00000450940 ELF1P32519 619 aa21.03■□□□□ 0.96
USP40-207ENST00000450940 NUBP1P53384 320 aa21.03■□□□□ 0.96
USP40-207ENST00000450940 YWHAHQ04917 246 aaPredicted RBP21.03■□□□□ 0.96
USP40-207ENST00000450940 FOXD4L5Q5VV16 416 aaPredicted RBP21.03■□□□□ 0.96
USP40-207ENST00000450940 C9orf57Q5W0N0 161 aa21.03■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 79 ms