RNA–Protein interactions for RNA: ENST00000441350.2

VPS13B-204, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 1 (best) BASIC

Gene VPS13B, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-204ENST00000441350 INPP5FQ9Y2H2 1132 aa22.69■■□□□ 1.22
VPS13B-204ENST00000441350 LUC7L2Q9Y383 392 aaKnown RBP22.69■■□□□ 1.22
VPS13B-204ENST00000441350 AKR1B15C9JRZ8 316 aaPredicted RBP22.68■■□□□ 1.22
VPS13B-204ENST00000441350 PIRO00625 290 aa22.68■■□□□ 1.22
VPS13B-204ENST00000441350 HOXA2O43364 376 aa22.68■■□□□ 1.22
VPS13B-204ENST00000441350 MFAP3LO75121 409 aa22.68■■□□□ 1.22
VPS13B-204ENST00000441350 POMCP01189 267 aa22.68■■□□□ 1.22
VPS13B-204ENST00000441350 SYN1P17600 705 aa22.68■■□□□ 1.22
VPS13B-204ENST00000441350 GSDMDP57764 484 aa22.68■■□□□ 1.22
VPS13B-204ENST00000441350 NOP14P78316 857 aaKnown RBP22.68■■□□□ 1.22
VPS13B-204ENST00000441350 ZBED6P86452 979 aa22.68■■□□□ 1.22
VPS13B-204ENST00000441350 NOMO2Q5JPE7 1267 aa22.68■■□□□ 1.22
VPS13B-204ENST00000441350 SPOPLQ6IQ16 392 aa22.68■■□□□ 1.22
VPS13B-204ENST00000441350 CCDC150Q8NCX0 1101 aa22.68■■□□□ 1.22
VPS13B-204ENST00000441350 IMPG2Q9BZV3 1241 aa22.68■■□□□ 1.22
VPS13B-204ENST00000441350 GOLGA2P5Q9HBQ8 144 aa22.68■■□□□ 1.22
VPS13B-204ENST00000441350 UBE2TQ9NPD8 197 aaPredicted RBP22.68■■□□□ 1.22
VPS13B-204ENST00000441350 NLRC4Q9NPP4 1024 aa22.68■■□□□ 1.22
VPS13B-204ENST00000441350 DNAJC12Q9UKB3 198 aa22.68■■□□□ 1.22
VPS13B-204ENST00000441350 NUB1Q9Y5A7 615 aa22.68■■□□□ 1.22
VPS13B-204ENST00000441350 STAU1O95793 577 aaKnown RBP22.68■■□□□ 1.22
VPS13B-204ENST00000441350 DEKP35659 375 aaKnown RBP22.68■■□□□ 1.22
VPS13B-204ENST00000441350 ADKP55263 362 aaKnown RBP22.68■■□□□ 1.22
VPS13B-204ENST00000441350 GOLGA8FQ08AF8 430 aa22.68■■□□□ 1.22
VPS13B-204ENST00000441350 GOLGA8DPQ0D2H9 430 aa22.68■■□□□ 1.22
VPS13B-204ENST00000441350 ZNF699Q32M78 642 aa22.68■■□□□ 1.22
VPS13B-204ENST00000441350 CACNA2D4Q7Z3S7 1137 aa22.68■■□□□ 1.22
VPS13B-204ENST00000441350 LRRC52Q8N7C0 313 aa22.68■■□□□ 1.22
VPS13B-204ENST00000441350 URGCPQ8TCY9 931 aa22.68■■□□□ 1.22
VPS13B-204ENST00000441350 DPF3Q92784 378 aa22.68■■□□□ 1.22
VPS13B-204ENST00000441350 KANSL3Q9P2N6 904 aa22.68■■□□□ 1.22
VPS13B-204ENST00000441350 ZMYND8Q9ULU4 1186 aaPredicted RBP22.68■■□□□ 1.22
VPS13B-204ENST00000441350 SCN1AP35498 2009 aa22.67■■□□□ 1.22
VPS13B-204ENST00000441350 PPEF2O14830 753 aa22.67■■□□□ 1.22
VPS13B-204ENST00000441350 KRT9P35527 623 aa22.67■■□□□ 1.22
VPS13B-204ENST00000441350 EPHB4P54760 987 aa22.67■■□□□ 1.22
VPS13B-204ENST00000441350 JAM2P57087 298 aa22.67■■□□□ 1.22
VPS13B-204ENST00000441350 WDR5P61964 334 aaKnown RBP22.67■■□□□ 1.22
VPS13B-204ENST00000441350 GCNT1Q02742 428 aa22.67■■□□□ 1.22
VPS13B-204ENST00000441350 ARID5BQ14865 1188 aa22.67■■□□□ 1.22
VPS13B-204ENST00000441350 RRAGAQ7L523 313 aa22.67■■□□□ 1.22
VPS13B-204ENST00000441350 CNGA4Q8IV77 575 aa22.67■■□□□ 1.22
VPS13B-204ENST00000441350 PPM1KQ8N3J5 372 aa22.67■■□□□ 1.22
VPS13B-204ENST00000441350 RSPH1Q8WYR4 309 aa22.67■■□□□ 1.22
VPS13B-204ENST00000441350 TOP1MTQ969P6 601 aa22.67■■□□□ 1.22
VPS13B-204ENST00000441350 HPDLQ96IR7 371 aa22.67■■□□□ 1.22
VPS13B-204ENST00000441350 KREMEN1Q96MU8 473 aa22.67■■□□□ 1.22
VPS13B-204ENST00000441350 CASD1Q96PB1 797 aa22.67■■□□□ 1.22
VPS13B-204ENST00000441350 STK33Q9BYT3 514 aa22.67■■□□□ 1.22
VPS13B-204ENST00000441350 FGBP02675 491 aa22.66■■□□□ 1.22
VPS13B-204ENST00000441350 AMHP03971 560 aa22.66■■□□□ 1.22
VPS13B-204ENST00000441350 ZNF365Q70YC5 407 aa22.66■■□□□ 1.22
VPS13B-204ENST00000441350 ZNF397Q8NF99 534 aaPredicted RBP22.66■■□□□ 1.22
VPS13B-204ENST00000441350 FAM81BQ96LP2 452 aa22.66■■□□□ 1.22
VPS13B-204ENST00000441350 DNAJC7Q99615 494 aa22.66■■□□□ 1.22
VPS13B-204ENST00000441350 TBC1D13Q9NVG8 400 aa22.66■■□□□ 1.22
VPS13B-204ENST00000441350 MYO6Q9UM54 1294 aa22.66■■□□□ 1.22
VPS13B-204ENST00000441350 R3HCC1Q9Y3T6 440 aaKnown RBP22.66■■□□□ 1.22
VPS13B-204ENST00000441350 FNDC1Q4ZHG4 1894 aaPredicted RBP22.65■■□□□ 1.22
VPS13B-204ENST00000441350 PTMAP06454 111 aaKnown RBP22.65■■□□□ 1.22
VPS13B-204ENST00000441350 RPL9P32969 192 aaKnown RBP22.65■■□□□ 1.22
VPS13B-204ENST00000441350 GATMP50440 423 aa22.65■■□□□ 1.22
VPS13B-204ENST00000441350 DEFB103AP81534 67 aa22.65■■□□□ 1.22
VPS13B-204ENST00000441350 DSC1Q08554 894 aa22.65■■□□□ 1.22
VPS13B-204ENST00000441350 TUSC3Q13454 348 aa22.65■■□□□ 1.22
VPS13B-204ENST00000441350 PDXDC1Q6P996 788 aa22.65■■□□□ 1.22
VPS13B-204ENST00000441350 ENOSF1Q7L5Y1 443 aa22.65■■□□□ 1.22
VPS13B-204ENST00000441350 OTOP2Q7RTS6 562 aa22.65■■□□□ 1.22
VPS13B-204ENST00000441350 ABI1Q8IZP0 508 aa22.65■■□□□ 1.22
VPS13B-204ENST00000441350 KAT5Q92993 513 aa22.65■■□□□ 1.22
VPS13B-204ENST00000441350 FAXDC2Q96IV6 333 aa22.65■■□□□ 1.22
VPS13B-204ENST00000441350 NIF3L1Q9GZT8 377 aa22.65■■□□□ 1.22
VPS13B-204ENST00000441350 MFAP3P55082 362 aa22.64■■□□□ 1.22
VPS13B-204ENST00000441350 MYO1EQ12965 1108 aa22.64■■□□□ 1.22
VPS13B-204ENST00000441350 CUL2Q13617 745 aa22.64■■□□□ 1.22
VPS13B-204ENST00000441350 DRAP1Q14919 205 aaPredicted RBP22.64■■□□□ 1.22
VPS13B-204ENST00000441350 ZNF667Q5HYK9 610 aa22.64■■□□□ 1.22
VPS13B-204ENST00000441350 TMEM240Q5SV17 173 aa22.64■■□□□ 1.22
VPS13B-204ENST00000441350 OR8K1Q8NGG5 319 aa22.64■■□□□ 1.22
VPS13B-204ENST00000441350 GPR88Q9GZN0 384 aa22.64■■□□□ 1.22
VPS13B-204ENST00000441350 ABHD10Q9NUJ1 306 aa22.64■■□□□ 1.22
VPS13B-204ENST00000441350 LRRC53A6NM62 1247 aa22.64■■□□□ 1.21
VPS13B-204ENST00000441350 DGKIO75912 1065 aa22.64■■□□□ 1.21
VPS13B-204ENST00000441350 UPP2O95045 317 aa22.64■■□□□ 1.21
VPS13B-204ENST00000441350 PNPLA4P41247 253 aa22.64■■□□□ 1.21
VPS13B-204ENST00000441350 RAPGEF1Q13905 1077 aa22.64■■□□□ 1.21
VPS13B-204ENST00000441350 UPP1Q16831 310 aa22.64■■□□□ 1.21
VPS13B-204ENST00000441350 WDR72Q3MJ13 1102 aa22.64■■□□□ 1.21
VPS13B-204ENST00000441350 PSRC1Q6PGN9 363 aaPredicted RBP22.64■■□□□ 1.21
VPS13B-204ENST00000441350 ZNF280BQ86YH2 543 aa22.64■■□□□ 1.21
VPS13B-204ENST00000441350 JAKMIP2Q96AA8 810 aa22.64■■□□□ 1.21
VPS13B-204ENST00000441350 PANX2Q96RD6 677 aa22.64■■□□□ 1.21
VPS13B-204ENST00000441350 ARID3AQ99856 593 aa22.64■■□□□ 1.21
VPS13B-204ENST00000441350 NUCKS1Q9H1E3 243 aaKnown RBP22.64■■□□□ 1.21
VPS13B-204ENST00000441350 CACNG4Q9UBN1 327 aa22.64■■□□□ 1.21
VPS13B-204ENST00000441350 COL4A6Q14031 1691 aa22.63■■□□□ 1.21
VPS13B-204ENST00000441350 CASTOR2A6NHX0 329 aa22.63■■□□□ 1.21
VPS13B-204ENST00000441350 F8VZ95 297 aa22.63■■□□□ 1.21
VPS13B-204ENST00000441350 B4GALT3O60512 393 aa22.63■■□□□ 1.21
VPS13B-204ENST00000441350 DDHD2O94830 711 aa22.63■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms