RNA–Protein interactions for RNA: ENST00000409828.7

PAX3-208, Transcript of paired box 3, humanhuman

TSL 1 (best) BASIC

Gene PAX3, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX3-208ENST00000409828 CHST7Q9NS84 486 aa19.6■□□□□ 0.73
PAX3-208ENST00000409828 VWA8A3KMH1 1905 aa19.59■□□□□ 0.73
PAX3-208ENST00000409828 PTPRJQ12913 1337 aa19.59■□□□□ 0.73
PAX3-208ENST00000409828 LRRIQ3A6PVS8 624 aaPredicted RBP19.59■□□□□ 0.73
PAX3-208ENST00000409828 FSCN2O14926 492 aa19.59■□□□□ 0.73
PAX3-208ENST00000409828 STX10O60499 249 aa19.59■□□□□ 0.73
PAX3-208ENST00000409828 CTSAP10619 480 aa19.59■□□□□ 0.73
PAX3-208ENST00000409828 STX17P56962 302 aa19.59■□□□□ 0.73
PAX3-208ENST00000409828 RBP5P82980 135 aa19.59■□□□□ 0.73
PAX3-208ENST00000409828 USP41Q3LFD5 358 aa19.59■□□□□ 0.73
PAX3-208ENST00000409828 C3orf58Q8NDZ4 430 aa19.59■□□□□ 0.73
PAX3-208ENST00000409828 OR5B17Q8NGF7 314 aa19.59■□□□□ 0.73
PAX3-208ENST00000409828 ENOX1Q8TC92 643 aaKnown RBP19.59■□□□□ 0.73
PAX3-208ENST00000409828 ZNF560Q96MR9 790 aa19.59■□□□□ 0.73
PAX3-208ENST00000409828 VN1R3Q9BXE9 311 aa19.59■□□□□ 0.73
PAX3-208ENST00000409828 MTMR12Q9C0I1 747 aa19.59■□□□□ 0.73
PAX3-208ENST00000409828 ZBP1Q9H171 429 aa19.59■□□□□ 0.73
PAX3-208ENST00000409828 ARMCX3Q9UH62 379 aaPredicted RBP19.59■□□□□ 0.73
PAX3-208ENST00000409828 NUB1Q9Y5A7 615 aa19.59■□□□□ 0.73
PAX3-208ENST00000409828 ARHGEF37A1IGU5 675 aa19.58■□□□□ 0.72
PAX3-208ENST00000409828 RFXAPO00287 272 aa19.58■□□□□ 0.72
PAX3-208ENST00000409828 SYN3O14994 580 aa19.58■□□□□ 0.72
PAX3-208ENST00000409828 STAU1O95793 577 aaKnown RBP19.58■□□□□ 0.72
PAX3-208ENST00000409828 CCDC192P0DO97 292 aa19.58■□□□□ 0.72
PAX3-208ENST00000409828 DNAJB1P25685 340 aa19.58■□□□□ 0.72
PAX3-208ENST00000409828 LILRA4P59901 499 aa19.58■□□□□ 0.72
PAX3-208ENST00000409828 TYRO3Q06418 890 aa19.58■□□□□ 0.72
PAX3-208ENST00000409828 ADGRE1Q14246 886 aa19.58■□□□□ 0.72
PAX3-208ENST00000409828 TIGD5Q53EQ6 642 aa19.58■□□□□ 0.72
PAX3-208ENST00000409828 PDXDC1Q6P996 788 aa19.58■□□□□ 0.72
PAX3-208ENST00000409828 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.58■□□□□ 0.72
PAX3-208ENST00000409828 TRAPPC11Q7Z392 1133 aa19.58■□□□□ 0.72
PAX3-208ENST00000409828 VPS52Q8N1B4 723 aa19.58■□□□□ 0.72
PAX3-208ENST00000409828 SUSD3Q96L08 255 aa19.58■□□□□ 0.72
PAX3-208ENST00000409828 FAM161BQ96MY7 647 aa19.58■□□□□ 0.72
PAX3-208ENST00000409828 SRRTQ9BXP5 876 aaKnown RBP19.58■□□□□ 0.72
PAX3-208ENST00000409828 GPR62Q9BZJ7 368 aa19.58■□□□□ 0.72
PAX3-208ENST00000409828 CACNG4Q9UBN1 327 aa19.58■□□□□ 0.72
PAX3-208ENST00000409828 MTCH2Q9Y6C9 303 aa19.58■□□□□ 0.72
PAX3-208ENST00000409828 F8W810 466 aa19.57■□□□□ 0.72
PAX3-208ENST00000409828 M0QZQ0 153 aa19.57■□□□□ 0.72
PAX3-208ENST00000409828 C4BPAP04003 597 aaKnown RBP19.57■□□□□ 0.72
PAX3-208ENST00000409828 ITGB3P05106 788 aa19.57■□□□□ 0.72
PAX3-208ENST00000409828 PRKCSHP14314 528 aaPredicted RBP19.57■□□□□ 0.72
PAX3-208ENST00000409828 FGFR3P22607 806 aa19.57■□□□□ 0.72
PAX3-208ENST00000409828 TAF6P49848 677 aa19.57■□□□□ 0.72
PAX3-208ENST00000409828 GUCY2FP51841 1108 aa19.57■□□□□ 0.72
PAX3-208ENST00000409828 DSG1Q02413 1049 aa19.57■□□□□ 0.72
PAX3-208ENST00000409828 ZACNQ401N2 412 aa19.57■□□□□ 0.72
PAX3-208ENST00000409828 C1orf220Q5T0J3 134 aa19.57■□□□□ 0.72
PAX3-208ENST00000409828 C15orf39Q6ZRI6 1047 aa19.57■□□□□ 0.72
PAX3-208ENST00000409828 ZNF516Q92618 1163 aa19.57■□□□□ 0.72
PAX3-208ENST00000409828 POP1Q99575 1024 aaKnown RBP19.57■□□□□ 0.72
PAX3-208ENST00000409828 FUCA2Q9BTY2 467 aa19.57■□□□□ 0.72
PAX3-208ENST00000409828 NAT10Q9H0A0 1025 aaKnown RBP19.57■□□□□ 0.72
PAX3-208ENST00000409828 THAP9Q9H5L6 903 aa19.57■□□□□ 0.72
PAX3-208ENST00000409828 SIX4Q9UIU6 781 aa19.57■□□□□ 0.72
PAX3-208ENST00000409828 R3HCC1Q9Y3T6 440 aaKnown RBP19.57■□□□□ 0.72
PAX3-208ENST00000409828 FSD2A1L4K1 749 aa19.56■□□□□ 0.72
PAX3-208ENST00000409828 LILRB3O75022 631 aa19.56■□□□□ 0.72
PAX3-208ENST00000409828 CAVIN2O95810 425 aa19.56■□□□□ 0.72
PAX3-208ENST00000409828 C1RP00736 705 aa19.56■□□□□ 0.72
PAX3-208ENST00000409828 POLR2BP30876 1174 aaKnown RBP19.56■□□□□ 0.72
PAX3-208ENST00000409828 ATICP31939 592 aa19.56■□□□□ 0.72
PAX3-208ENST00000409828 ERVFC1P60507 584 aa19.56■□□□□ 0.72
PAX3-208ENST00000409828 DLG4P78352 724 aa19.56■□□□□ 0.72
PAX3-208ENST00000409828 SMC1AQ14683 1233 aaKnown RBP19.56■□□□□ 0.72
PAX3-208ENST00000409828 SV2CQ496J9 727 aa19.56■□□□□ 0.72
PAX3-208ENST00000409828 KIAA0319Q5VV43 1072 aa19.56■□□□□ 0.72
PAX3-208ENST00000409828 TMC7Q7Z402 723 aa19.56■□□□□ 0.72
PAX3-208ENST00000409828 FAM114A1Q8IWE2 563 aa19.56■□□□□ 0.72
PAX3-208ENST00000409828 MRPL43Q8N983 215 aaKnown RBP19.56■□□□□ 0.72
PAX3-208ENST00000409828 RABGGTAQ92696 567 aa19.56■□□□□ 0.72
PAX3-208ENST00000409828 PPP2R3CQ969Q6 453 aa19.56■□□□□ 0.72
PAX3-208ENST00000409828 EEF2KMTQ96G04 330 aa19.56■□□□□ 0.72
PAX3-208ENST00000409828 TCF25Q9BQ70 676 aa19.56■□□□□ 0.72
PAX3-208ENST00000409828 BPIFA3Q9BQP9 254 aa19.56■□□□□ 0.72
PAX3-208ENST00000409828 TTPALQ9BTX7 342 aa19.56■□□□□ 0.72
PAX3-208ENST00000409828 VRTNQ9H8Y1 702 aa19.56■□□□□ 0.72
PAX3-208ENST00000409828 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.56■□□□□ 0.72
PAX3-208ENST00000409828 AGAP1Q9UPQ3 857 aa19.56■□□□□ 0.72
PAX3-208ENST00000409828 PMM2O15305 246 aa19.55■□□□□ 0.72
PAX3-208ENST00000409828 URODP06132 367 aa19.55■□□□□ 0.72
PAX3-208ENST00000409828 GLUD2P49448 558 aa19.55■□□□□ 0.72
PAX3-208ENST00000409828 CREMQ03060 361 aa19.55■□□□□ 0.72
PAX3-208ENST00000409828 MYO1EQ12965 1108 aa19.55■□□□□ 0.72
PAX3-208ENST00000409828 TPD52L1Q16890 204 aaPredicted RBP19.55■□□□□ 0.72
PAX3-208ENST00000409828 FAM171A1Q5VUB5 890 aa19.55■□□□□ 0.72
PAX3-208ENST00000409828 LMBRD2Q68DH5 695 aaPredicted RBP19.55■□□□□ 0.72
PAX3-208ENST00000409828 SV2AQ7L0J3 742 aa19.55■□□□□ 0.72
PAX3-208ENST00000409828 TRIM59Q8IWR1 403 aa19.55■□□□□ 0.72
PAX3-208ENST00000409828 APPL2Q8NEU8 664 aa19.55■□□□□ 0.72
PAX3-208ENST00000409828 SPATA18Q8TC71 538 aa19.55■□□□□ 0.72
PAX3-208ENST00000409828 PIK3R5Q8WYR1 880 aa19.55■□□□□ 0.72
PAX3-208ENST00000409828 SLC35C1Q96A29 364 aa19.55■□□□□ 0.72
PAX3-208ENST00000409828 NSUN3Q9H649 340 aaKnown RBP19.55■□□□□ 0.72
PAX3-208ENST00000409828 RXFP1Q9HBX9 757 aa19.55■□□□□ 0.72
PAX3-208ENST00000409828 TMEM8AQ9HCN3 771 aa19.55■□□□□ 0.72
PAX3-208ENST00000409828 ENTPD7Q9NQZ7 604 aa19.55■□□□□ 0.72
PAX3-208ENST00000409828 MRPL17Q9NRX2 175 aaKnown RBP19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms