RNA–Protein interactions for RNA: ENST00000374426.6

CXCL12-202, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 1 (best) BASIC

Gene CXCL12, Length 470 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-202ENST00000374426 RBM19Q9Y4C8 960 aaKnown RBP15.09■□□□□ 0.01
CXCL12-202ENST00000374426 NUB1Q9Y5A7 615 aa15.09■□□□□ 0.01
CXCL12-202ENST00000374426 STK24Q9Y6E0 443 aa15.09■□□□□ 0.01
CXCL12-202ENST00000374426 SFI1A8K8P3 1242 aa15.08■□□□□ 0
CXCL12-202ENST00000374426 SLC16A4O15374 487 aa15.08■□□□□ 0
CXCL12-202ENST00000374426 NCAM2O15394 837 aa15.08■□□□□ 0
CXCL12-202ENST00000374426 MICAL2O94851 1124 aa15.08■□□□□ 0
CXCL12-202ENST00000374426 HARSP12081 509 aaKnown RBP15.08■□□□□ 0
CXCL12-202ENST00000374426 ADCY1Q08828 1119 aa15.08■□□□□ 0
CXCL12-202ENST00000374426 SLC10A6Q3KNW5 377 aa15.08■□□□□ 0
CXCL12-202ENST00000374426 CTXN3Q4LDR2 81 aa15.08■□□□□ 0
CXCL12-202ENST00000374426 KRT79Q5XKE5 535 aa15.08■□□□□ 0
CXCL12-202ENST00000374426 TPGS2Q68CL5 300 aa15.08■□□□□ 0
CXCL12-202ENST00000374426 TSSK4Q6SA08 328 aa15.08■□□□□ 0
CXCL12-202ENST00000374426 ATRIPQ8WXE1 791 aa15.08■□□□□ 0
CXCL12-202ENST00000374426 ZSWIM3Q96MP5 696 aa15.08■□□□□ 0
CXCL12-202ENST00000374426 ASB16Q96NS5 453 aa15.08■□□□□ 0
CXCL12-202ENST00000374426 NTPCRQ9BSD7 190 aaKnown RBP15.08■□□□□ 0
CXCL12-202ENST00000374426 MMTAG2Q9BU76 263 aaKnown RBP15.08■□□□□ 0
CXCL12-202ENST00000374426 RAB34Q9BZG1 259 aa15.08■□□□□ 0
CXCL12-202ENST00000374426 C17orf75Q9HAS0 396 aa15.08■□□□□ 0
CXCL12-202ENST00000374426 ZFP14Q9HCL3 533 aa15.08■□□□□ 0
CXCL12-202ENST00000374426 PRMT8Q9NR22 394 aaPredicted RBP15.08■□□□□ 0
CXCL12-202ENST00000374426 ZSCAN32Q9NX65 697 aa15.08■□□□□ 0
CXCL12-202ENST00000374426 MRPS17Q9Y2R5 130 aaKnown RBP15.08■□□□□ 0
CXCL12-202ENST00000374426 CITO14578 2027 aa15.08■□□□□ 0
CXCL12-202ENST00000374426 ACACBO00763 2458 aa15.08■□□□□ 0
CXCL12-202ENST00000374426 ZNF197O14709 1029 aa15.07■□□□□ 0
CXCL12-202ENST00000374426 LILRB5O75023 590 aa15.07■□□□□ 0
CXCL12-202ENST00000374426 MOSPD3O75425 235 aa15.07■□□□□ 0
CXCL12-202ENST00000374426 MTAPQ13126 283 aa15.07■□□□□ 0
CXCL12-202ENST00000374426 SEZ6Q53EL9 994 aa15.07■□□□□ 0
CXCL12-202ENST00000374426 ZNF280DQ6N043 979 aa15.07■□□□□ 0
CXCL12-202ENST00000374426 PDZD4Q76G19 769 aaPredicted RBP15.07■□□□□ 0
CXCL12-202ENST00000374426 HS6ST3Q8IZP7 471 aa15.07■□□□□ 0
CXCL12-202ENST00000374426 TMEM130Q8N3G9 435 aa15.07■□□□□ 0
CXCL12-202ENST00000374426 FAM184AQ8NB25 1140 aa15.07■□□□□ 0
CXCL12-202ENST00000374426 TBC1D32Q96NH3 1257 aa15.07■□□□□ 0
CXCL12-202ENST00000374426 TRMT61BQ9BVS5 477 aaKnown RBP15.07■□□□□ 0
CXCL12-202ENST00000374426 EPC1Q9H2F5 836 aa15.07■□□□□ 0
CXCL12-202ENST00000374426 BRD9Q9H8M2 597 aa15.07■□□□□ 0
CXCL12-202ENST00000374426 CEP72Q9P209 647 aa15.07■□□□□ 0
CXCL12-202ENST00000374426 ANKFY1Q9P2R3 1169 aa15.07■□□□□ 0
CXCL12-202ENST00000374426 NCDNQ9UBB6 729 aa15.07■□□□□ 0
CXCL12-202ENST00000374426 TUBGCP4Q9UGJ1 667 aa15.07■□□□□ 0
CXCL12-202ENST00000374426 AFF4Q9UHB7 1163 aaKnown RBP15.07■□□□□ 0
CXCL12-202ENST00000374426 EIF5BO60841 1220 aaKnown RBP15.06■□□□□ 0
CXCL12-202ENST00000374426 TOM1L1O75674 476 aa15.06■□□□□ 0
CXCL12-202ENST00000374426 NEFLP07196 543 aa15.06■□□□□ 0
CXCL12-202ENST00000374426 GUCY2CP25092 1073 aa15.06■□□□□ 0
CXCL12-202ENST00000374426 MCM4P33991 863 aa15.06■□□□□ 0
CXCL12-202ENST00000374426 TWF1Q12792 350 aa15.06■□□□□ 0
CXCL12-202ENST00000374426 NOLC1Q14978 699 aaKnown RBP eCLIP15.06■□□□□ 0
CXCL12-202ENST00000374426 RSPO4Q2I0M5 234 aaPredicted RBP15.06■□□□□ 0
CXCL12-202ENST00000374426 CYP4A22Q5TCH4 519 aa15.06■□□□□ 0
CXCL12-202ENST00000374426 IQCEQ6IPM2 695 aa15.06■□□□□ 0
CXCL12-202ENST00000374426 VITQ6UXI7 678 aa15.06■□□□□ 0
CXCL12-202ENST00000374426 MAP4K3Q8IVH8 894 aa15.06■□□□□ 0
CXCL12-202ENST00000374426 TMEM161BQ8NDZ6 487 aa15.06■□□□□ 0
CXCL12-202ENST00000374426 APPL2Q8NEU8 664 aa15.06■□□□□ 0
CXCL12-202ENST00000374426 SPIRE2Q8WWL2 714 aa15.06■□□□□ 0
CXCL12-202ENST00000374426 DDX12PQ92771 950 aa15.06■□□□□ 0
CXCL12-202ENST00000374426 SMARCD2Q92925 531 aa15.06■□□□□ 0
CXCL12-202ENST00000374426 NDRG2Q9UN36 371 aaKnown RBP15.06■□□□□ 0
CXCL12-202ENST00000374426 SMG5Q9UPR3 1016 aaKnown RBP15.06■□□□□ 0
CXCL12-202ENST00000374426 CACNA1BQ00975 2339 aa15.05■□□□□ 0
CXCL12-202ENST00000374426 LAD1O00515 517 aa15.05■□□□□ -0
CXCL12-202ENST00000374426 MAN2B1O00754 1011 aa15.05■□□□□ -0
CXCL12-202ENST00000374426 MAPTP10636 758 aaKnown RBP15.05■□□□□ -0
CXCL12-202ENST00000374426 TDGF1P13385 188 aa15.05■□□□□ -0
CXCL12-202ENST00000374426 GJA1P17302 382 aa15.05■□□□□ -0
CXCL12-202ENST00000374426 PSMC3P17980 439 aa15.05■□□□□ -0
CXCL12-202ENST00000374426 PRPHP41219 470 aa15.05■□□□□ -0
CXCL12-202ENST00000374426 VIPR2P41587 438 aa15.05■□□□□ -0
CXCL12-202ENST00000374426 EPHA5P54756 1037 aa15.05■□□□□ -0
CXCL12-202ENST00000374426 RAD51AP2Q09MP3 1159 aa15.05■□□□□ -0
CXCL12-202ENST00000374426 STRN3Q13033 797 aa15.05■□□□□ -0
CXCL12-202ENST00000374426 DTHD1Q6ZMT9 781 aa15.05■□□□□ -0
CXCL12-202ENST00000374426 RNF19BQ6ZMZ0 732 aa15.05■□□□□ -0
CXCL12-202ENST00000374426 ELMOD1Q8N336 334 aa15.05■□□□□ -0
CXCL12-202ENST00000374426 BEST2Q8NFU1 509 aa15.05■□□□□ -0
CXCL12-202ENST00000374426 IRF7Q92985 503 aa15.05■□□□□ -0
CXCL12-202ENST00000374426 ZSCAN31Q96LW9 406 aaPredicted RBP15.05■□□□□ -0
CXCL12-202ENST00000374426 ZNF512Q96ME7 567 aaPredicted RBP15.05■□□□□ -0
CXCL12-202ENST00000374426 TIPINQ9BVW5 301 aa15.05■□□□□ -0
CXCL12-202ENST00000374426 HAPLN2Q9GZV7 340 aa15.05■□□□□ -0
CXCL12-202ENST00000374426 CHRDQ9H2X0 955 aa15.05■□□□□ -0
CXCL12-202ENST00000374426 TRPV4Q9HBA0 871 aa15.05■□□□□ -0
CXCL12-202ENST00000374426 ZNF334Q9HCZ1 680 aaPredicted RBP15.05■□□□□ -0
CXCL12-202ENST00000374426 TRPV5Q9NQA5 729 aa15.05■□□□□ -0
CXCL12-202ENST00000374426 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.05■□□□□ -0
CXCL12-202ENST00000374426 SH2B1Q9NRF2 756 aaPredicted RBP15.05■□□□□ -0
CXCL12-202ENST00000374426 PPP4R2Q9NY27 417 aa15.05■□□□□ -0
CXCL12-202ENST00000374426 MAFFQ9ULX9 164 aa15.05■□□□□ -0
CXCL12-202ENST00000374426 PCDHB8Q9UN66 801 aa15.05■□□□□ -0
CXCL12-202ENST00000374426 NCANO14594 1321 aa15.05■□□□□ -0
CXCL12-202ENST00000374426 COL4A2P08572 1712 aa15.05■□□□□ -0
CXCL12-202ENST00000374426 M0QZQ0 153 aa15.04■□□□□ -0
CXCL12-202ENST00000374426 VNN2O95498 520 aa15.04■□□□□ -0
CXCL12-202ENST00000374426 CXCL8P10145 99 aa15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms