RNA–Protein interactions for RNA: ENST00000331920.10

PTCH1-201, Transcript of patched 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCH1, Length 8,057 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-201ENST00000331920 NME5P56597 212 aa17.16■□□□□ 0.34
PTCH1-201ENST00000331920 TRIP10Q15642 601 aa17.16■□□□□ 0.34
PTCH1-201ENST00000331920 NACC2Q96BF6 587 aa17.16■□□□□ 0.34
PTCH1-201ENST00000331920 PARVAQ9NVD7 372 aa17.16■□□□□ 0.34
PTCH1-201ENST00000331920 MAGI1Q96QZ7 1491 aaPredicted RBP17.16■□□□□ 0.34
PTCH1-201ENST00000331920 XDHP47989 1333 aa17.16■□□□□ 0.34
PTCH1-201ENST00000331920 GTF2E2P29084 291 aaKnown RBP17.16■□□□□ 0.34
PTCH1-201ENST00000331920 CNTN1Q12860 1018 aa17.16■□□□□ 0.34
PTCH1-201ENST00000331920 ADI1Q9BV57 179 aa17.16■□□□□ 0.34
PTCH1-201ENST00000331920 ZNF302Q9NR11 478 aa17.16■□□□□ 0.34
PTCH1-201ENST00000331920 SLC30A1Q9Y6M5 507 aa17.16■□□□□ 0.34
PTCH1-201ENST00000331920 PRXQ9BXM0 1461 aa17.16■□□□□ 0.34
PTCH1-201ENST00000331920 RRM2P31350 389 aa17.16■□□□□ 0.34
PTCH1-201ENST00000331920 KRT76Q01546 638 aa17.16■□□□□ 0.34
PTCH1-201ENST00000331920 CYP51A1Q16850 503 aa17.16■□□□□ 0.34
PTCH1-201ENST00000331920 SLFNL1Q499Z3 407 aa17.16■□□□□ 0.34
PTCH1-201ENST00000331920 SLC30A9Q6PML9 568 aa17.16■□□□□ 0.34
PTCH1-201ENST00000331920 RAVER2Q9HCJ3 691 aaKnown RBP17.16■□□□□ 0.34
PTCH1-201ENST00000331920 PTPN7P35236 360 aa17.16■□□□□ 0.34
PTCH1-201ENST00000331920 AP3B2Q13367 1082 aa17.16■□□□□ 0.34
PTCH1-201ENST00000331920 RNFT2Q96EX2 444 aa17.16■□□□□ 0.34
PTCH1-201ENST00000331920 L3MBTL3Q96JM7 780 aaPredicted RBP17.16■□□□□ 0.34
PTCH1-201ENST00000331920 RNF26Q9BY78 433 aaPredicted RBP17.16■□□□□ 0.34
PTCH1-201ENST00000331920 COQ6Q9Y2Z9 468 aa17.16■□□□□ 0.34
PTCH1-201ENST00000331920 AASDHQ4L235 1098 aaPredicted RBP17.16■□□□□ 0.34
PTCH1-201ENST00000331920 TRIM39Q9HCM9 518 aa17.16■□□□□ 0.34
PTCH1-201ENST00000331920 RPN2P04844 631 aa17.16■□□□□ 0.34
PTCH1-201ENST00000331920 STX3Q13277 289 aa17.16■□□□□ 0.34
PTCH1-201ENST00000331920 FBXW10Q5XX13 1052 aa17.16■□□□□ 0.34
PTCH1-201ENST00000331920 VSTM4Q8IW00 320 aa17.16■□□□□ 0.34
PTCH1-201ENST00000331920 FAM45AQ8TCE6 357 aa17.16■□□□□ 0.34
PTCH1-201ENST00000331920 ROGDIQ9GZN7 287 aa17.16■□□□□ 0.34
PTCH1-201ENST00000331920 TRABDQ9H4I3 376 aa17.16■□□□□ 0.34
PTCH1-201ENST00000331920 CHMP2BQ9UQN3 213 aa17.16■□□□□ 0.34
PTCH1-201ENST00000331920 SH3BP1Q9Y3L3 701 aa17.16■□□□□ 0.34
PTCH1-201ENST00000331920 SNX8Q9Y5X2 465 aa17.16■□□□□ 0.34
PTCH1-201ENST00000331920 SMIM31A0A1B0GVY4 71 aa17.15■□□□□ 0.34
PTCH1-201ENST00000331920 TALDO1P37837 337 aa17.15■□□□□ 0.34
PTCH1-201ENST00000331920 TAF5Q15542 800 aa17.15■□□□□ 0.34
PTCH1-201ENST00000331920 TSPAN17Q96FV3 270 aa17.15■□□□□ 0.34
PTCH1-201ENST00000331920 NR3C1P04150 777 aa17.15■□□□□ 0.34
PTCH1-201ENST00000331920 PSMC3P17980 439 aa17.15■□□□□ 0.34
PTCH1-201ENST00000331920 CHRM3P20309 590 aa17.15■□□□□ 0.34
PTCH1-201ENST00000331920 NANOGNBQ7Z5D8 188 aa17.15■□□□□ 0.34
PTCH1-201ENST00000331920 SPATA33Q96N06 139 aa17.15■□□□□ 0.34
PTCH1-201ENST00000331920 ABHD10Q9NUJ1 306 aa17.15■□□□□ 0.34
PTCH1-201ENST00000331920 RNF123Q5XPI4 1314 aa17.15■□□□□ 0.34
PTCH1-201ENST00000331920 C3orf70A6NLC5 250 aaPredicted RBP17.15■□□□□ 0.34
PTCH1-201ENST00000331920 TBXAS1P24557 533 aaPredicted RBP17.15■□□□□ 0.34
PTCH1-201ENST00000331920 KCNQ4P56696 695 aa17.15■□□□□ 0.34
PTCH1-201ENST00000331920 STX4Q12846 297 aa17.15■□□□□ 0.34
PTCH1-201ENST00000331920 DTNBP1Q96EV8 351 aa17.15■□□□□ 0.34
PTCH1-201ENST00000331920 LONRF1Q17RB8 773 aa17.15■□□□□ 0.34
PTCH1-201ENST00000331920 LRRC8DQ7L1W4 858 aa17.15■□□□□ 0.34
PTCH1-201ENST00000331920 MOSPD2Q8NHP6 518 aa17.15■□□□□ 0.34
PTCH1-201ENST00000331920 TM6SF1Q9BZW5 370 aa17.15■□□□□ 0.34
PTCH1-201ENST00000331920 APPL1Q9UKG1 709 aa17.15■□□□□ 0.34
PTCH1-201ENST00000331920 MAP3K19Q56UN5 1328 aa17.15■□□□□ 0.34
PTCH1-201ENST00000331920 PNMA6FA0A0J9YX94 578 aa17.15■□□□□ 0.34
PTCH1-201ENST00000331920 NOS3P29474 1203 aa17.15■□□□□ 0.34
PTCH1-201ENST00000331920 RSBN1Q5VWQ0 802 aaPredicted RBP17.15■□□□□ 0.34
PTCH1-201ENST00000331920 ZNF438Q7Z4V0 828 aa17.15■□□□□ 0.34
PTCH1-201ENST00000331920 TAF1DQ9H5J8 278 aaPredicted RBP17.15■□□□□ 0.34
PTCH1-201ENST00000331920 SCUBE2Q9NQ36 999 aa17.15■□□□□ 0.34
PTCH1-201ENST00000331920 LSM7Q9UK45 103 aaKnown RBP17.15■□□□□ 0.34
PTCH1-201ENST00000331920 JAK3P52333 1124 aa17.15■□□□□ 0.34
PTCH1-201ENST00000331920 TRIM65Q6PJ69 517 aa17.15■□□□□ 0.34
PTCH1-201ENST00000331920 EPHX4Q8IUS5 362 aa17.15■□□□□ 0.34
PTCH1-201ENST00000331920 GIMAP8Q8ND71 665 aaPredicted RBP17.15■□□□□ 0.34
PTCH1-201ENST00000331920 FANCEQ9HB96 536 aa17.15■□□□□ 0.34
PTCH1-201ENST00000331920 P3H1Q32P28 736 aa17.14■□□□□ 0.34
PTCH1-201ENST00000331920 DAB2IPQ5VWQ8 1189 aa17.14■□□□□ 0.34
PTCH1-201ENST00000331920 CAMKK1Q8N5S9 505 aa17.14■□□□□ 0.34
PTCH1-201ENST00000331920 DDHD1Q8NEL9 900 aa17.14■□□□□ 0.34
PTCH1-201ENST00000331920 MS4A14Q96JA4 679 aa17.14■□□□□ 0.34
PTCH1-201ENST00000331920 PI4KBQ9UBF8 816 aa17.14■□□□□ 0.34
PTCH1-201ENST00000331920 PADI4Q9UM07 663 aa17.14■□□□□ 0.34
PTCH1-201ENST00000331920 SCGNO76038 276 aa17.14■□□□□ 0.33
PTCH1-201ENST00000331920 DPYDQ12882 1025 aa17.14■□□□□ 0.33
PTCH1-201ENST00000331920 SPATA21Q7Z572 469 aa17.14■□□□□ 0.33
PTCH1-201ENST00000331920 TRIM24O15164 1050 aa17.14■□□□□ 0.33
PTCH1-201ENST00000331920 PCNAP12004 261 aa17.14■□□□□ 0.33
PTCH1-201ENST00000331920 RGS7P49802 495 aa17.14■□□□□ 0.33
PTCH1-201ENST00000331920 FAM83BQ5T0W9 1011 aa17.14■□□□□ 0.33
PTCH1-201ENST00000331920 ATAD3BQ5T9A4 648 aa17.14■□□□□ 0.33
PTCH1-201ENST00000331920 WLSQ5T9L3 541 aa17.14■□□□□ 0.33
PTCH1-201ENST00000331920 CFAP99D6REC4 459 aa17.14■□□□□ 0.33
PTCH1-201ENST00000331920 CASP1P29466 404 aa17.14■□□□□ 0.33
PTCH1-201ENST00000331920 POU4F1Q01851 419 aa17.14■□□□□ 0.33
PTCH1-201ENST00000331920 PDZK1Q5T2W1 519 aa17.14■□□□□ 0.33
PTCH1-201ENST00000331920 SWSAP1Q6NVH7 229 aa17.14■□□□□ 0.33
PTCH1-201ENST00000331920 CENPLQ8N0S6 344 aaPredicted RBP17.14■□□□□ 0.33
PTCH1-201ENST00000331920 MMP19Q99542 508 aa17.14■□□□□ 0.33
PTCH1-201ENST00000331920 POLR3FQ9H1D9 316 aaPredicted RBP17.14■□□□□ 0.33
PTCH1-201ENST00000331920 WNT8AQ9H1J5 351 aa17.14■□□□□ 0.33
PTCH1-201ENST00000331920 NEUROD4Q9HD90 331 aa17.14■□□□□ 0.33
PTCH1-201ENST00000331920 CEP72Q9P209 647 aa17.14■□□□□ 0.33
PTCH1-201ENST00000331920 PRKAB2O43741 272 aa17.14■□□□□ 0.33
PTCH1-201ENST00000331920 PCP11498 1178 aaKnown RBP17.14■□□□□ 0.33
PTCH1-201ENST00000331920 KCNJ6P48051 423 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms