RNA–Protein interactions for RNA: YPR002W

PDH1, Transcript of Putative 2-methylcitrate dehydratase, yeast

Gene PDH1, Length 1,551 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PDH1	YPR002W	MEK1	P24719	497 aa	Predicted RBP	4.81	□□□□□ -1.64
PDH1	YPR002W	MXR2	P25566	168 aa		4.81	□□□□□ -1.64
PDH1	YPR002W	ERG3	P32353	365 aa		4.81	□□□□□ -1.64
PDH1	YPR002W	HXT14	P42833	540 aa		4.81	□□□□□ -1.64
PDH1	YPR002W	NIT2	P47016	307 aa		4.81	□□□□□ -1.64
PDH1	YPR002W	PKP2	P53170	491 aa		4.81	□□□□□ -1.64
PDH1	YPR002W	MRPS17	Q03246	237 aa	Predicted RBP	4.81	□□□□□ -1.64
PDH1	YPR002W	TMA23	Q03525	211 aa		4.81	□□□□□ -1.64
PDH1	YPR002W	THI74	Q04083	370 aa		4.81	□□□□□ -1.64
PDH1	YPR002W	BNA5	Q05979	453 aa		4.81	□□□□□ -1.64
PDH1	YPR002W	MCH4	Q08268	501 aa		4.81	□□□□□ -1.64
PDH1	YPR002W	SRL2	Q12020	392 aa		4.81	□□□□□ -1.64
PDH1	YPR002W	YCT1	Q12235	531 aa		4.81	□□□□□ -1.64
PDH1	YPR002W	VAM3	Q12241	283 aa		4.81	□□□□□ -1.64
PDH1	YPR002W	TOR1	P35169	2470 aa		4.8	□□□□□ -1.64
PDH1	YPR002W	RPS27A	P35997	82 aa	Known RBP	4.8	□□□□□ -1.64
PDH1	YPR002W	MRPL4	P36517	319 aa		4.8	□□□□□ -1.64
PDH1	YPR002W	FRM2	P37261	193 aa		4.8	□□□□□ -1.64
PDH1	YPR002W	FAT1	P38225	669 aa		4.8	□□□□□ -1.64
PDH1	YPR002W	OM14	P38325	134 aa		4.8	□□□□□ -1.64
PDH1	YPR002W	PRS2	P38620	318 aa	Known RBP	4.8	□□□□□ -1.64
PDH1	YPR002W	RPS27B	P38711	82 aa		4.8	□□□□□ -1.64
PDH1	YPR002W	WSC4	P38739	605 aa		4.8	□□□□□ -1.64
PDH1	YPR002W	YEA4	P40004	342 aa		4.8	□□□□□ -1.64
PDH1	YPR002W	RPL13B	P40212	199 aa	Known RBP	4.8	□□□□□ -1.64
PDH1	YPR002W	SLM1	P40485	686 aa		4.8	□□□□□ -1.64
PDH1	YPR002W	GPP1	P41277	250 aa	Known RBP	4.8	□□□□□ -1.64
PDH1	YPR002W	BNS1	P50084	137 aa		4.8	□□□□□ -1.64
PDH1	YPR002W	ERV14	P53173	138 aa		4.8	□□□□□ -1.64
PDH1	YPR002W	PEF1	P53238	335 aa		4.8	□□□□□ -1.64
PDH1	YPR002W	YIF1	P53845	314 aa	Known RBP	4.8	□□□□□ -1.64
PDH1	YPR002W	SAM50	P53969	484 aa		4.8	□□□□□ -1.64
PDH1	YPR002W	ADD37	Q03233	198 aa		4.8	□□□□□ -1.64
PDH1	YPR002W	PAL1	Q05518	499 aa	Known RBP	4.8	□□□□□ -1.64
PDH1	YPR002W	CTR3	Q06686	241 aa		4.8	□□□□□ -1.64
PDH1	YPR002W	RPL13A	Q12690	199 aa	Predicted RBP	4.8	□□□□□ -1.64
PDH1	YPR002W	SEC59	P20048	519 aa		4.79	□□□□□ -1.64
PDH1	YPR002W	YKL097C	P34245	136 aa		4.79	□□□□□ -1.64
PDH1	YPR002W	SSS1	P35179	80 aa		4.79	□□□□□ -1.64
PDH1	YPR002W	YPT31	P38555	223 aa	Known RBP	4.79	□□□□□ -1.64
PDH1	YPR002W	YHR180W	P38868	163 aa		4.79	□□□□□ -1.64
PDH1	YPR002W	PFS1	P38872	237 aa		4.79	□□□□□ -1.64
PDH1	YPR002W	GET2	P40056	285 aa		4.79	□□□□□ -1.64
PDH1	YPR002W	XBP1	P40489	647 aa		4.79	□□□□□ -1.64
PDH1	YPR002W	YJR141W	P47172	347 aa	Predicted RBP	4.79	□□□□□ -1.64
PDH1	YPR002W	PMT3	P47190	753 aa		4.79	□□□□□ -1.64
PDH1	YPR002W	BRR6	P53062	197 aa		4.79	□□□□□ -1.64
PDH1	YPR002W	YGL185C	P53100	379 aa		4.79	□□□□□ -1.64
PDH1	YPR002W	BSC5	P53755	489 aa		4.79	□□□□□ -1.64
PDH1	YPR002W	RHO5	P53879	331 aa	Known RBP	4.79	□□□□□ -1.64
PDH1	YPR002W	ACS1	Q01574	713 aa		4.79	□□□□□ -1.64
PDH1	YPR002W	SKO1	Q02100	647 aa		4.79	□□□□□ -1.64
PDH1	YPR002W	MEH1	Q02205	184 aa		4.79	□□□□□ -1.64
PDH1	YPR002W	PML1	Q07930	204 aa	Predicted RBP	4.79	□□□□□ -1.64
PDH1	YPR002W	MIM1	Q08176	113 aa		4.79	□□□□□ -1.64
PDH1	YPR002W	FAS1	P07149	2051 aa	Known RBP	4.79	□□□□□ -1.64
PDH1	YPR002W	BRR2	P32639	2163 aa	Known RBP	4.79	□□□□□ -1.64
PDH1	YPR002W	SCO1	P23833	295 aa		4.78	□□□□□ -1.64
PDH1	YPR002W	SCM4	P32564	187 aa		4.78	□□□□□ -1.64
PDH1	YPR002W	YNK1	P36010	153 aa	Known RBP	4.78	□□□□□ -1.64
PDH1	YPR002W	PHS1	P40857	217 aa		4.78	□□□□□ -1.64
PDH1	YPR002W	AVT4	P50944	713 aa		4.78	□□□□□ -1.64
PDH1	YPR002W	SEH1	P53011	349 aa	Known RBP	4.78	□□□□□ -1.64
PDH1	YPR002W	TEX1	P53851	422 aa	Known RBP	4.78	□□□□□ -1.64
PDH1	YPR002W	RNH201	P53942	307 aa		4.78	□□□□□ -1.64
PDH1	YPR002W	VPS28	Q02767	242 aa		4.78	□□□□□ -1.64
PDH1	YPR002W	RSM10	Q03201	203 aa		4.78	□□□□□ -1.64
PDH1	YPR002W	YMR082C	Q04276	118 aa		4.78	□□□□□ -1.64
PDH1	YPR002W	THI73	Q07904	523 aa		4.78	□□□□□ -1.64
PDH1	YPR002W	MED4	Q12343	284 aa		4.78	□□□□□ -1.64
PDH1	YPR002W	TAO3	P40468	2376 aa		4.78	□□□□□ -1.64
PDH1	YPR002W	CET1	O13297	549 aa	Predicted RBP	4.78	□□□□□ -1.64
PDH1	YPR002W	AIM17	P23180	465 aa	Known RBP	4.78	□□□□□ -1.64
PDH1	YPR002W	RFA3	P26755	122 aa	Known RBP	4.78	□□□□□ -1.64
PDH1	YPR002W	POP5	P28005	173 aa		4.78	□□□□□ -1.64
PDH1	YPR002W	LAC1	P28496	418 aa		4.78	□□□□□ -1.64
PDH1	YPR002W	RIB5	P38145	238 aa		4.78	□□□□□ -1.64
PDH1	YPR002W	ARC40	P38328	384 aa	Known RBP	4.78	□□□□□ -1.64
PDH1	YPR002W	YIL077C	P40508	320 aa		4.78	□□□□□ -1.64
PDH1	YPR002W	GWT1	P47026	490 aa		4.78	□□□□□ -1.64
PDH1	YPR002W	IKS1	P47042	667 aa		4.78	□□□□□ -1.64
PDH1	YPR002W	NNT1	Q05874	261 aa		4.78	□□□□□ -1.64
PDH1	YPR002W	ERP4	Q12450	207 aa		4.78	□□□□□ -1.64
PDH1	YPR002W	UBA3	Q99344	299 aa		4.78	□□□□□ -1.64
PDH1	YPR002W	SCEI	P03882	235 aa		4.77	□□□□□ -1.65
PDH1	YPR002W	FAA1	P30624	700 aa	Known RBP	4.77	□□□□□ -1.65
PDH1	YPR002W	EMP70	P32802	667 aa		4.77	□□□□□ -1.65
PDH1	YPR002W	SLM6	P38343	150 aa		4.77	□□□□□ -1.65
PDH1	YPR002W	LSM4	P40070	187 aa	Known RBP	4.77	□□□□□ -1.65
PDH1	YPR002W	FLX1	P40464	311 aa		4.77	□□□□□ -1.65
PDH1	YPR002W	AIM24	P47127	394 aa		4.77	□□□□□ -1.65
PDH1	YPR002W	PUS4	P48567	403 aa	Known RBP	4.77	□□□□□ -1.65
PDH1	YPR002W	MGA1	P53050	456 aa		4.77	□□□□□ -1.65
PDH1	YPR002W	SMM1	P53720	384 aa	Known RBP	4.77	□□□□□ -1.65
PDH1	YPR002W	YNR061C	P53747	219 aa		4.77	□□□□□ -1.65
PDH1	YPR002W	GMC1	Q04399	608 aa		4.77	□□□□□ -1.65
PDH1	YPR002W	SEN15	Q04675	128 aa		4.77	□□□□□ -1.65
PDH1	YPR002W	TMA10	Q06177	86 aa		4.77	□□□□□ -1.65
PDH1	YPR002W	YLR456W	Q06199	204 aa		4.77	□□□□□ -1.65
PDH1	YPR002W	ATG33	Q06485	197 aa		4.77	□□□□□ -1.65

Retrieved 100 of 5,963 RNA–protein pairs in 15.2 ms