RNA–Protein interactions for RNA: YNL248C

RPA49, Transcript of RNA polymerase I subunit A49, yeast

Gene RPA49, Length 1,248 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPA49	YNL248C	RPL13B	P40212	199 aa	Known RBP	4.56	□□□□□ -1.68
RPA49	YNL248C	ATF1	P40353	525 aa		4.56	□□□□□ -1.68
RPA49	YNL248C	MOB2	P43563	287 aa		4.56	□□□□□ -1.68
RPA49	YNL248C	CAF16	P43569	289 aa		4.56	□□□□□ -1.68
RPA49	YNL248C	ADO1	P47143	340 aa	Known RBP	4.56	□□□□□ -1.68
RPA49	YNL248C	OCA1	P50946	238 aa	Predicted RBP	4.56	□□□□□ -1.68
RPA49	YNL248C	ATG21	Q02887	496 aa		4.56	□□□□□ -1.68
RPA49	YNL248C	MRP51	Q02950	344 aa		4.56	□□□□□ -1.68
RPA49	YNL248C	MDM30	Q05930	598 aa		4.56	□□□□□ -1.68
RPA49	YNL248C	MRX9	Q07349	420 aa	Known RBP	4.56	□□□□□ -1.68
RPA49	YNL248C	RPL13A	Q12690	199 aa	Predicted RBP	4.56	□□□□□ -1.68
RPA49	YNL248C	PCC1	Q3E833	88 aa		4.56	□□□□□ -1.68
RPA49	YNL248C	YOR032W-A	Q8TGS1	66 aa		4.56	□□□□□ -1.68
RPA49	YNL248C	QCR2	P07257	368 aa		4.55	□□□□□ -1.68
RPA49	YNL248C	YLL053C	P0CD98	152 aa		4.55	□□□□□ -1.68
RPA49	YNL248C	CKA1	P15790	372 aa		4.55	□□□□□ -1.68
RPA49	YNL248C	DAL82	P21705	255 aa		4.55	□□□□□ -1.68
RPA49	YNL248C	TRR1	P29509	319 aa	Known RBP	4.55	□□□□□ -1.68
RPA49	YNL248C	PIC2	P40035	300 aa		4.55	□□□□□ -1.68
RPA49	YNL248C	AGX1	P43567	385 aa		4.55	□□□□□ -1.68
RPA49	YNL248C	ECO1	P43605	281 aa		4.55	□□□□□ -1.68
RPA49	YNL248C	SSN8	P47821	323 aa		4.55	□□□□□ -1.68
RPA49	YNL248C	CAF40	P53829	373 aa		4.55	□□□□□ -1.68
RPA49	YNL248C	GPI15	P53961	229 aa		4.55	□□□□□ -1.68
RPA49	YNL248C	MEH1	Q02205	184 aa		4.55	□□□□□ -1.68
RPA49	YNL248C	VPS28	Q02767	242 aa		4.55	□□□□□ -1.68
RPA49	YNL248C	ODC1	Q03028	310 aa		4.55	□□□□□ -1.68
RPA49	YNL248C	YDR387C	Q04162	555 aa		4.55	□□□□□ -1.68
RPA49	YNL248C	CAC2	Q04199	468 aa		4.55	□□□□□ -1.68
RPA49	YNL248C	ZEO1	Q08245	113 aa		4.55	□□□□□ -1.68
RPA49	YNL248C	USB1	Q12208	290 aa	Known RBP	4.55	□□□□□ -1.68
RPA49	YNL248C	ISN1	Q99312	450 aa		4.55	□□□□□ -1.68
RPA49	YNL248C	CYR1	P08678	2026 aa	Known RBP	4.55	□□□□□ -1.68
RPA49	YNL248C	POL2	P21951	2222 aa	Known RBP	4.54	□□□□□ -1.68
RPA49	YNL248C	FAS1	P07149	2051 aa	Known RBP	4.54	□□□□□ -1.68
RPA49	YNL248C	RPL25	P04456	142 aa	Known RBP	4.54	□□□□□ -1.68
RPA49	YNL248C	MSK1	P32048	576 aa		4.54	□□□□□ -1.68
RPA49	YNL248C	GLC7	P32598	312 aa	Known RBP	4.54	□□□□□ -1.68
RPA49	YNL248C	YBR096W	P38256	230 aa		4.54	□□□□□ -1.68
RPA49	YNL248C	SHG1	P38337	142 aa		4.54	□□□□□ -1.68
RPA49	YNL248C	LNP1	P38878	278 aa		4.54	□□□□□ -1.68
RPA49	YNL248C	MSY1	P48527	492 aa		4.54	□□□□□ -1.68
RPA49	YNL248C	NSA1	P53136	463 aa	Predicted RBP	4.54	□□□□□ -1.68
RPA49	YNL248C	SLX9	P53251	210 aa	Predicted RBP	4.54	□□□□□ -1.68
RPA49	YNL248C	FMP41	P53889	259 aa	Known RBP	4.54	□□□□□ -1.68
RPA49	YNL248C	NRG1	Q03125	231 aa		4.54	□□□□□ -1.68
RPA49	YNL248C	TRS23	Q03784	219 aa		4.54	□□□□□ -1.68
RPA49	YNL248C	THI74	Q04083	370 aa		4.54	□□□□□ -1.68
RPA49	YNL248C	ERP1	Q05359	219 aa	Known RBP	4.54	□□□□□ -1.68
RPA49	YNL248C	YCT1	Q12235	531 aa		4.54	□□□□□ -1.68
RPA49	YNL248C	VMA9	Q3E7B6	73 aa		4.54	□□□□□ -1.68
RPA49	YNL248C	YPR117W	Q06116	2489 aa		4.53	□□□□□ -1.68
RPA49	YNL248C	CDC28	P00546	298 aa	Known RBP	4.53	□□□□□ -1.68
RPA49	YNL248C	GAL1	P04385	528 aa		4.53	□□□□□ -1.68
RPA49	YNL248C	GDH1	P07262	454 aa	Known RBP	4.53	□□□□□ -1.68
RPA49	YNL248C	MIR1	P23641	311 aa	Known RBP	4.53	□□□□□ -1.68
RPA49	YNL248C	RIB5	P38145	238 aa		4.53	□□□□□ -1.68
RPA49	YNL248C	YEA6	P39953	335 aa		4.53	□□□□□ -1.68
RPA49	YNL248C	GPP1	P41277	250 aa	Known RBP	4.53	□□□□□ -1.68
RPA49	YNL248C	YJR056C	P47115	236 aa		4.53	□□□□□ -1.68
RPA49	YNL248C	MOG1	P47123	218 aa		4.53	□□□□□ -1.68
RPA49	YNL248C	YCL001W-A	P87012	153 aa		4.53	□□□□□ -1.68
RPA49	YNL248C	EST3	Q03096	181 aa		4.53	□□□□□ -1.68
RPA49	YNL248C	YDR415C	Q04033	374 aa	Predicted RBP	4.53	□□□□□ -1.68
RPA49	YNL248C	TSA2	Q04120	196 aa		4.53	□□□□□ -1.68
RPA49	YNL248C	HRI1	Q05905	244 aa	Known RBP	4.53	□□□□□ -1.68
RPA49	YNL248C	YOR186W	Q08560	144 aa		4.53	□□□□□ -1.68
RPA49	YNL248C	HUT1	Q12520	339 aa		4.53	□□□□□ -1.68
RPA49	YNL248C	HBN1	Q96VH4	193 aa		4.53	□□□□□ -1.68
RPA49	YNL248C	SPS4	P09937	338 aa		4.52	□□□□□ -1.69
RPA49	YNL248C	YML003W	P0CF16	290 aa		4.52	□□□□□ -1.69
RPA49	YNL248C	ARO3	P14843	370 aa	Known RBP	4.52	□□□□□ -1.69
RPA49	YNL248C	PRE9	P23638	258 aa	Known RBP	4.52	□□□□□ -1.69
RPA49	YNL248C	YCR101C	P25607	182 aa		4.52	□□□□□ -1.69
RPA49	YNL248C	AGA2	P32781	87 aa		4.52	□□□□□ -1.69
RPA49	YNL248C	REC114	P32841	428 aa		4.52	□□□□□ -1.69
RPA49	YNL248C	ECM31	P38122	312 aa		4.52	□□□□□ -1.69
RPA49	YNL248C	FAT1	P38225	669 aa		4.52	□□□□□ -1.69
RPA49	YNL248C	ERV15	P38312	142 aa		4.52	□□□□□ -1.69
RPA49	YNL248C	GPI16	P38875	610 aa		4.52	□□□□□ -1.69
RPA49	YNL248C	QRI1	P43123	477 aa	Known RBP	4.52	□□□□□ -1.69
RPA49	YNL248C	RPA34	P47006	233 aa	Predicted RBP	4.52	□□□□□ -1.69
RPA49	YNL248C	TNA1	P53322	534 aa		4.52	□□□□□ -1.69
RPA49	YNL248C	APJ1	P53940	528 aa		4.52	□□□□□ -1.69
RPA49	YNL248C	MRPS17	Q03246	237 aa	Predicted RBP	4.52	□□□□□ -1.69
RPA49	YNL248C	RFU1	Q08003	200 aa		4.52	□□□□□ -1.69
RPA49	YNL248C	GRE1	Q08969	168 aa		4.52	□□□□□ -1.69
RPA49	YNL248C	PRS5	Q12265	496 aa	Known RBP	4.52	□□□□□ -1.69
RPA49	YNL248C	YDL180W	Q12301	547 aa		4.52	□□□□□ -1.69
RPA49	YNL248C	TDH1	P00360	332 aa	Known RBP	4.51	□□□□□ -1.69
RPA49	YNL248C	DEG1	P31115	442 aa	Known RBP	4.51	□□□□□ -1.69
RPA49	YNL248C	OCH1	P31755	480 aa		4.51	□□□□□ -1.69
RPA49	YNL248C	MNS1	P32906	549 aa		4.51	□□□□□ -1.69
RPA49	YNL248C	MCH2	P36032	473 aa		4.51	□□□□□ -1.69
RPA49	YNL248C	YKL162C	P36052	402 aa		4.51	□□□□□ -1.69
RPA49	YNL248C	ARC40	P38328	384 aa	Known RBP	4.51	□□□□□ -1.69
RPA49	YNL248C	PRS3	P38689	320 aa	Known RBP	4.51	□□□□□ -1.69
RPA49	YNL248C	PGD1	P40356	397 aa		4.51	□□□□□ -1.69
RPA49	YNL248C	YIL169C	P40442	995 aa		4.51	□□□□□ -1.69
RPA49	YNL248C	POG1	P40473	351 aa		4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 31.4 ms