RNA–Protein interactions for RNA: YMR046C

YMR046C, Transcript of Retrotransposon TYA Gag gene co-transcribed with TYB Pol, yeastyeast

Gene YMR046C, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YMR046CYMR046C ASI3P53983 676 aa2.3□□□□□ -2.04
YMR046CYMR046C YPL039WQ03080 316 aa2.3□□□□□ -2.04
YMR046CYMR046C RNH1Q04740 348 aa2.3□□□□□ -2.04
YMR046CYMR046C YPS3Q12303 508 aa2.3□□□□□ -2.04
YMR046CYMR046C PEX34P25584 144 aa2.29□□□□□ -2.04
YMR046CYMR046C MOT1P32333 1867 aa2.29□□□□□ -2.04
YMR046CYMR046C ECM13P38195 257 aa2.29□□□□□ -2.04
YMR046CYMR046C AIM18P38884 321 aa2.29□□□□□ -2.04
YMR046CYMR046C YER085CP40058 173 aa2.29□□□□□ -2.04
YMR046CYMR046C ECO1P43605 281 aa2.29□□□□□ -2.04
YMR046CYMR046C BUD13P46947 266 aaPredicted RBP2.29□□□□□ -2.04
YMR046CYMR046C HOC1P47124 396 aa2.29□□□□□ -2.04
YMR046CYMR046C LDB18Q07887 179 aa2.29□□□□□ -2.04
YMR046CYMR046C CLP1Q08685 445 aaPredicted RBP2.29□□□□□ -2.04
YMR046CYMR046C ISD11Q6Q560 94 aa2.29□□□□□ -2.04
YMR046CYMR046C YEL009C-AA0A023PZF2 135 aa2.28□□□□□ -2.04
YMR046CYMR046C TDH2P00358 332 aaKnown RBP2.28□□□□□ -2.04
YMR046CYMR046C CMD1P06787 147 aaKnown RBP2.28□□□□□ -2.04
YMR046CYMR046C RPS23AP0CX29 145 aaKnown RBP2.28□□□□□ -2.04
YMR046CYMR046C RPS23BP0CX30 145 aa2.28□□□□□ -2.04
YMR046CYMR046C GPA2P10823 449 aa2.28□□□□□ -2.04
YMR046CYMR046C MGT1P26188 188 aa2.28□□□□□ -2.04
YMR046CYMR046C RPS5P26783 225 aaKnown RBP2.28□□□□□ -2.04
YMR046CYMR046C EHD3P28817 500 aa2.28□□□□□ -2.04
YMR046CYMR046C MSN4P33749 630 aa2.28□□□□□ -2.04
YMR046CYMR046C YBR096WP38256 230 aa2.28□□□□□ -2.04
YMR046CYMR046C FZO1P38297 855 aa2.28□□□□□ -2.04
YMR046CYMR046C URA8P38627 578 aaPredicted RBP2.28□□□□□ -2.04
YMR046CYMR046C YEL028WP39989 153 aa2.28□□□□□ -2.04
YMR046CYMR046C ALG9P53868 555 aaKnown RBP2.28□□□□□ -2.04
YMR046CYMR046C YPR098CQ06089 161 aa2.28□□□□□ -2.04
YMR046CYMR046C COQ10Q08058 207 aa2.28□□□□□ -2.04
YMR046CYMR046C PLB3Q08108 686 aa2.28□□□□□ -2.04
YMR046CYMR046C YCT1Q12235 531 aa2.28□□□□□ -2.04
YMR046CYMR046C SMT3Q12306 101 aaKnown RBP2.28□□□□□ -2.04
YMR046CYMR046C YBL112CQ3E7Y4 105 aa2.28□□□□□ -2.04
YMR046CYMR046C RPB4P20433 221 aaPredicted RBP2.27□□□□□ -2.05
YMR046CYMR046C LDB7P38210 180 aa2.27□□□□□ -2.05
YMR046CYMR046C EDC3P39998 551 aaKnown RBP2.27□□□□□ -2.05
YMR046CYMR046C THO1P40040 218 aaKnown RBP2.27□□□□□ -2.05
YMR046CYMR046C GCN20P43535 752 aaKnown RBP2.27□□□□□ -2.05
YMR046CYMR046C JHD2P47156 728 aaPredicted RBP2.27□□□□□ -2.05
YMR046CYMR046C MIG2P53035 382 aa2.27□□□□□ -2.05
YMR046CYMR046C NHP10Q03435 203 aa2.27□□□□□ -2.05
YMR046CYMR046C YMR166CQ03829 368 aa2.27□□□□□ -2.05
YMR046CYMR046C YPR147CQ06522 304 aaKnown RBP2.27□□□□□ -2.05
YMR046CYMR046C SNU23Q12368 194 aaPredicted RBP2.27□□□□□ -2.05
YMR046CYMR046C MRX4Q12467 430 aa2.27□□□□□ -2.05
YMR046CYMR046C YKR104WP0CE69 306 aa2.26□□□□□ -2.05
YMR046CYMR046C GOS1P38736 223 aa2.26□□□□□ -2.05
YMR046CYMR046C MED6P38782 295 aa2.26□□□□□ -2.05
YMR046CYMR046C BFR1P38934 470 aaKnown RBP RIP-Chip data2.26□□□□□ -2.05not detected
YMR046CYMR046C TEM1P38987 245 aa2.26□□□□□ -2.05
YMR046CYMR046C YJL028WP47062 111 aa2.26□□□□□ -2.05
YMR046CYMR046C NIF3P53081 288 aa2.26□□□□□ -2.05
YMR046CYMR046C MRH4P53166 561 aa2.26□□□□□ -2.05
YMR046CYMR046C CTF19Q02732 369 aa2.26□□□□□ -2.05
YMR046CYMR046C HPT1Q04178 221 aaKnown RBP2.26□□□□□ -2.05
YMR046CYMR046C SPG4Q04438 115 aa2.26□□□□□ -2.05
YMR046CYMR046C YDR114CQ04597 100 aa2.26□□□□□ -2.05
YMR046CYMR046C YPR114WQ06107 315 aa2.26□□□□□ -2.05
YMR046CYMR046C SWC7Q06707 132 aa2.26□□□□□ -2.05
YMR046CYMR046C RRS1Q08746 203 aaKnown RBP2.26□□□□□ -2.05
YMR046CYMR046C TIM22Q12328 207 aa2.26□□□□□ -2.05
YMR046CYMR046C MATALPHA1P0CY06 175 aa2.25□□□□□ -2.05
YMR046CYMR046C HMLALPHA1P0CY07 175 aa2.25□□□□□ -2.05
YMR046CYMR046C DPB2P24482 689 aaPredicted RBP2.25□□□□□ -2.05
YMR046CYMR046C SFC1P33303 322 aa2.25□□□□□ -2.05
YMR046CYMR046C YKL075CP36083 450 aa2.25□□□□□ -2.05
YMR046CYMR046C SMX2P40204 77 aaKnown RBP2.25□□□□□ -2.05
YMR046CYMR046C FCF1Q05498 189 aaPredicted RBP2.25□□□□□ -2.05
YMR046CYMR046C SPO77Q06134 477 aa2.25□□□□□ -2.05
YMR046CYMR046C YOL019WQ08157 551 aa2.25□□□□□ -2.05
YMR046CYMR046C SYC1Q08553 188 aaPredicted RBP2.25□□□□□ -2.05
YMR046CYMR046C GTT2Q12390 233 aa2.25□□□□□ -2.05
YMR046CYMR046C PEX11Q12462 236 aa2.25□□□□□ -2.05
YMR046CYMR046C YPL247CQ12523 523 aa2.25□□□□□ -2.05
YMR046CYMR046C HIS3P06633 220 aa2.24□□□□□ -2.05
YMR046CYMR046C CPA1P07258 411 aaKnown RBP2.24□□□□□ -2.05
YMR046CYMR046C NMT1P14743 455 aa2.24□□□□□ -2.05
YMR046CYMR046C PPH21P23594 369 aa2.24□□□□□ -2.05
YMR046CYMR046C TOM40P23644 387 aaKnown RBP2.24□□□□□ -2.05
YMR046CYMR046C RPC19P28000 142 aaKnown RBP2.24□□□□□ -2.05
YMR046CYMR046C CAB3P36076 571 aa2.24□□□□□ -2.05
YMR046CYMR046C SPO73P40031 143 aa2.24□□□□□ -2.05
YMR046CYMR046C OTU1P43558 301 aa2.24□□□□□ -2.05
YMR046CYMR046C RCF2P53721 224 aa2.24□□□□□ -2.05
YMR046CYMR046C RHO3Q00245 231 aaKnown RBP2.24□□□□□ -2.05
YMR046CYMR046C EMI1Q04406 187 aa2.24□□□□□ -2.05
YMR046CYMR046C YDR124WQ04608 324 aa2.24□□□□□ -2.05
YMR046CYMR046C CDC123Q05791 360 aa2.24□□□□□ -2.05
YMR046CYMR046C RRP40Q08285 240 aaKnown RBP2.24□□□□□ -2.05
YMR046CYMR046C NOT5Q12514 560 aaPredicted RBP2.24□□□□□ -2.05
YMR046CYMR046C YBL008W-AQ3E821 79 aa2.24□□□□□ -2.05
YMR046CYMR046C YKL068W-AQ3E826 78 aa2.24□□□□□ -2.05
YMR046CYMR046C UBR2Q07963 1872 aa2.24□□□□□ -2.05
YMR046CYMR046C LAA1P39526 2014 aa2.24□□□□□ -2.05
YMR046CYMR046C COX5AP00424 153 aa2.23□□□□□ -2.05
YMR046CYMR046C RAD10P06838 210 aa2.23□□□□□ -2.05
YMR046CYMR046C GCY1P14065 312 aaKnown RBP RIP-Chip data2.23□□□□□ -2.05not detected
Retrieved 100 of 5,963 RNA–protein pairs in 73.1 ms