RNA–Protein interactions for RNA: YMR039C

SUB1, Transcript of Transcriptional coactivator, yeastyeast

Gene SUB1, Length 879 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SUB1YMR039C YPR011CQ12251 326 aa2.32□□□□□ -2.04
SUB1YMR039C PST1Q12355 444 aa2.32□□□□□ -2.04
SUB1YMR039C YLR462WO13556 202 aa2.31□□□□□ -2.04
SUB1YMR039C CDC28P00546 298 aaKnown RBP2.31□□□□□ -2.04
SUB1YMR039C IPP1P00817 287 aaKnown RBP2.31□□□□□ -2.04
SUB1YMR039C RPL35AP0CX84 120 aaKnown RBP2.31□□□□□ -2.04
SUB1YMR039C RPL35BP0CX85 120 aaKnown RBP2.31□□□□□ -2.04
SUB1YMR039C FBA1P14540 359 aaKnown RBP2.31□□□□□ -2.04
SUB1YMR039C DBF2P22204 572 aa2.31□□□□□ -2.04
SUB1YMR039C SPS18P32572 300 aa2.31□□□□□ -2.04
SUB1YMR039C MRPL28P36527 147 aa2.31□□□□□ -2.04
SUB1YMR039C GRE3P38715 327 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04not detected
SUB1YMR039C ECM14P38836 430 aa2.31□□□□□ -2.04
SUB1YMR039C MTW1P39731 289 aa2.31□□□□□ -2.04
SUB1YMR039C YEL075CP39972 122 aa2.31□□□□□ -2.04
SUB1YMR039C CAT5P41735 233 aa2.31□□□□□ -2.04
SUB1YMR039C SYF2P53277 215 aaPredicted RBP2.31□□□□□ -2.04
SUB1YMR039C ABF2Q02486 183 aa2.31□□□□□ -2.04
SUB1YMR039C INM2Q05533 292 aa2.31□□□□□ -2.04
SUB1YMR039C CDD1Q06549 142 aa2.31□□□□□ -2.04
SUB1YMR039C PRR2Q12310 699 aa2.31□□□□□ -2.04
SUB1YMR039C IES3Q12345 250 aa2.31□□□□□ -2.04
SUB1YMR039C YPL247CQ12523 523 aa2.31□□□□□ -2.04
SUB1YMR039C YBL112CQ3E7Y4 105 aa2.31□□□□□ -2.04
SUB1YMR039C YPL229WQ99395 206 aa2.31□□□□□ -2.04
SUB1YMR039C HTL1Q9URQ5 78 aa2.31□□□□□ -2.04
SUB1YMR039C SWI1P09547 1314 aa2.31□□□□□ -2.04
SUB1YMR039C PAN1P32521 1480 aa2.31□□□□□ -2.04
SUB1YMR039C UTR5P32630 166 aa2.3□□□□□ -2.04
SUB1YMR039C POG1P40473 351 aa2.3□□□□□ -2.04
SUB1YMR039C RSM25P40496 264 aa2.3□□□□□ -2.04
SUB1YMR039C ERG10P41338 398 aaKnown RBP2.3□□□□□ -2.04
SUB1YMR039C YJR056CP47115 236 aa2.3□□□□□ -2.04
SUB1YMR039C ERV29P53337 310 aa2.3□□□□□ -2.04
SUB1YMR039C RRP17Q04031 235 aaPredicted RBP2.3□□□□□ -2.04
SUB1YMR039C YML096WQ04489 525 aa2.3□□□□□ -2.04
SUB1YMR039C YOL019WQ08157 551 aa2.3□□□□□ -2.04
SUB1YMR039C MSA1Q08471 629 aa2.3□□□□□ -2.04
SUB1YMR039C YOR020W-AQ3E824 90 aa2.3□□□□□ -2.04
SUB1YMR039C SEC4P07560 215 aaKnown RBP2.29□□□□□ -2.04
SUB1YMR039C OAC1P32332 324 aa2.29□□□□□ -2.04
SUB1YMR039C TKL2P33315 681 aa2.29□□□□□ -2.04
SUB1YMR039C YFR045WP43617 309 aa2.29□□□□□ -2.04
SUB1YMR039C ALG9P53868 555 aaKnown RBP2.29□□□□□ -2.04
SUB1YMR039C YMD8Q03697 442 aa2.29□□□□□ -2.04
SUB1YMR039C GRH1Q04410 372 aaKnown RBP2.29□□□□□ -2.04
SUB1YMR039C YPL257WQ08974 193 aa2.29□□□□□ -2.04
SUB1YMR039C MDM32Q12171 622 aa2.29□□□□□ -2.04
SUB1YMR039C TRR1P29509 319 aaKnown RBP2.28□□□□□ -2.04
SUB1YMR039C ERG24P32462 438 aaKnown RBP2.28□□□□□ -2.04
SUB1YMR039C TCA17P32613 152 aa2.28□□□□□ -2.04
SUB1YMR039C UBC6P33296 250 aaPredicted RBP2.28□□□□□ -2.04
SUB1YMR039C ECM33P38248 429 aaKnown RBP2.28□□□□□ -2.04
SUB1YMR039C COS8P38723 381 aa2.28□□□□□ -2.04
SUB1YMR039C DOG2P38773 246 aa2.28□□□□□ -2.04
SUB1YMR039C DOG1P38774 246 aa2.28□□□□□ -2.04
SUB1YMR039C MIG2P53035 382 aa2.28□□□□□ -2.04
SUB1YMR039C MDM34P53083 459 aa2.28□□□□□ -2.04
SUB1YMR039C YGL159WP53110 370 aa2.28□□□□□ -2.04
SUB1YMR039C GTR2P53290 341 aa2.28□□□□□ -2.04
SUB1YMR039C YLR179CQ06252 201 aaKnown RBP2.28□□□□□ -2.04
SUB1YMR039C YPR063CQ12160 140 aa2.28□□□□□ -2.04
SUB1YMR039C AGC1Q12482 902 aa2.28□□□□□ -2.04
SUB1YMR039C RPL25P04456 142 aaKnown RBP2.27□□□□□ -2.05
SUB1YMR039C ADH3P07246 375 aaKnown RBP2.27□□□□□ -2.05
SUB1YMR039C MAG1P22134 296 aaKnown RBP2.27□□□□□ -2.05
SUB1YMR039C TOM40P23644 387 aaKnown RBP2.27□□□□□ -2.05
SUB1YMR039C FES1P38260 290 aa2.27□□□□□ -2.05
SUB1YMR039C RPF1P38805 295 aaKnown RBP2.27□□□□□ -2.05
SUB1YMR039C COG3P40094 801 aa2.27□□□□□ -2.05
SUB1YMR039C ECO1P43605 281 aa2.27□□□□□ -2.05
SUB1YMR039C RPA43P46669 326 aa2.27□□□□□ -2.05
SUB1YMR039C BUD13P46947 266 aaPredicted RBP2.27□□□□□ -2.05
SUB1YMR039C LSM7P53905 115 aaKnown RBP2.27□□□□□ -2.05
SUB1YMR039C PRM15Q03262 622 aa2.27□□□□□ -2.05
SUB1YMR039C YLR030WQ07967 263 aa2.27□□□□□ -2.05
SUB1YMR039C GEP5Q12393 293 aa2.27□□□□□ -2.05
SUB1YMR039C NOT5Q12514 560 aaPredicted RBP2.27□□□□□ -2.05
SUB1YMR039C MRS1P07266 363 aa2.26□□□□□ -2.05
SUB1YMR039C SGA1P08019 549 aa2.26□□□□□ -2.05
SUB1YMR039C DSF1P0CX08 502 aa2.26□□□□□ -2.05
SUB1YMR039C YNR073CP0CX09 502 aa2.26□□□□□ -2.05
SUB1YMR039C RCN1P36054 211 aa2.26□□□□□ -2.05
SUB1YMR039C YAR068WP39564 161 aa2.26□□□□□ -2.05
SUB1YMR039C RMD6P39975 231 aa2.26□□□□□ -2.05
SUB1YMR039C PDS1P40316 373 aaPredicted RBP2.26□□□□□ -2.05
SUB1YMR039C FIS1P40515 155 aa2.26□□□□□ -2.05
SUB1YMR039C YGL088WP53151 121 aa2.26□□□□□ -2.05
SUB1YMR039C NRK1P53915 240 aa2.26□□□□□ -2.05
SUB1YMR039C FCF1Q05498 189 aaPredicted RBP2.26□□□□□ -2.05
SUB1YMR039C YLR036CQ07986 203 aa2.26□□□□□ -2.05
SUB1YMR039C NIP7Q08962 181 aaKnown RBP2.26□□□□□ -2.05
SUB1YMR039C USB1Q12208 290 aaKnown RBP2.26□□□□□ -2.05
SUB1YMR039C YDL085C-AQ3E7B7 68 aaKnown RBP2.26□□□□□ -2.05
SUB1YMR039C YHR139C-AO13536 103 aa2.25□□□□□ -2.05
SUB1YMR039C GCY1P14065 312 aaKnown RBP RIP-Chip data2.25□□□□□ -2.05not detected
SUB1YMR039C FCY2P17064 533 aa2.25□□□□□ -2.05
SUB1YMR039C MSA2P36157 363 aa2.25□□□□□ -2.05
SUB1YMR039C YGP1P38616 354 aaKnown RBP2.25□□□□□ -2.05
SUB1YMR039C HMF1P40037 129 aaKnown RBP2.25□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 52.5 ms