RNA–Protein interactions for RNA: YMR022W

UBC7, Transcript of Ubiquitin conjugating enzyme, yeast

Gene UBC7, Length 498 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBC7	YMR022W	COS2	P0CX12	379 aa		0.76	□□□□□ -2.29
UBC7	YMR022W	COS3	P0CX13	379 aa		0.76	□□□□□ -2.29
UBC7	YMR022W	POX1	P13711	748 aa		0.76	□□□□□ -2.29
UBC7	YMR022W	YSR3	P23501	404 aa		0.76	□□□□□ -2.29
UBC7	YMR022W	ERV15	P38312	142 aa		0.76	□□□□□ -2.29
UBC7	YMR022W	SER33	P40510	469 aa		0.76	□□□□□ -2.29
UBC7	YMR022W	NUP57	P48837	541 aa		0.76	□□□□□ -2.29
UBC7	YMR022W	RPL9B	P51401	191 aa	Known RBP	0.76	□□□□□ -2.29
UBC7	YMR022W	YNL260C	P53846	198 aa		0.76	□□□□□ -2.29
UBC7	YMR022W	CTR3	Q06686	241 aa		0.76	□□□□□ -2.29
UBC7	YMR022W	RAS2	P01120	322 aa	Known RBP	0.75	□□□□□ -2.29
UBC7	YMR022W	RPP0	P05317	312 aa	Known RBP	0.75	□□□□□ -2.29
UBC7	YMR022W	SEC22	P22214	214 aa		0.75	□□□□□ -2.29
UBC7	YMR022W	CDC39	P25655	2108 aa	Known RBP	0.75	□□□□□ -2.29
UBC7	YMR022W	AVT2	P39981	480 aa		0.75	□□□□□ -2.29
UBC7	YMR022W	YKE4	P40544	346 aa		0.75	□□□□□ -2.29
UBC7	YMR022W	MAL13	P53338	473 aa		0.75	□□□□□ -2.29
UBC7	YMR022W	USB1	Q12208	290 aa	Known RBP	0.75	□□□□□ -2.29
UBC7	YMR022W	YPR011C	Q12251	326 aa		0.75	□□□□□ -2.29
UBC7	YMR022W	BPH1	P25356	2167 aa		0.74	□□□□□ -2.29
UBC7	YMR022W	STF1	P01098	86 aa		0.74	□□□□□ -2.29
UBC7	YMR022W	RPC40	P07703	335 aa	Known RBP	0.74	□□□□□ -2.29
UBC7	YMR022W	SNA3	P14359	133 aa		0.74	□□□□□ -2.29
UBC7	YMR022W	PRS4	P38063	326 aa	Predicted RBP	0.74	□□□□□ -2.29
UBC7	YMR022W	YHL049C	P38722	271 aa		0.74	□□□□□ -2.29
UBC7	YMR022W	VPS45	P38932	577 aa		0.74	□□□□□ -2.29
UBC7	YMR022W	YJR079W	P47126	109 aa		0.74	□□□□□ -2.29
UBC7	YMR022W	RSM10	Q03201	203 aa		0.74	□□□□□ -2.29
UBC7	YMR022W	VBA1	Q04301	562 aa		0.74	□□□□□ -2.29
UBC7	YMR022W	YDR124W	Q04608	324 aa		0.74	□□□□□ -2.29
UBC7	YMR022W	LOA1	Q06508	300 aa		0.74	□□□□□ -2.29
UBC7	YMR022W	RIO1	Q12196	484 aa	Known RBP	0.74	□□□□□ -2.29
UBC7	YMR022W	DUR1,2	P32528	1835 aa	Known RBP	0.73	□□□□□ -2.29
UBC7	YMR022W	BLM10	P43583	2143 aa		0.73	□□□□□ -2.29
UBC7	YMR022W	SWI1	P09547	1314 aa		0.73	□□□□□ -2.29
UBC7	YMR022W	SSK22	P25390	1331 aa	Predicted RBP	0.73	□□□□□ -2.29
UBC7	YMR022W	OAC1	P32332	324 aa		0.73	□□□□□ -2.29
UBC7	YMR022W	FZO1	P38297	855 aa		0.73	□□□□□ -2.29
UBC7	YMR022W	YHR125W	P38831	101 aa		0.73	□□□□□ -2.29
UBC7	YMR022W	RPL13B	P40212	199 aa	Known RBP	0.73	□□□□□ -2.29
UBC7	YMR022W	JHD2	P47156	728 aa	Predicted RBP	0.73	□□□□□ -2.29
UBC7	YMR022W	NBP35	P52920	328 aa		0.73	□□□□□ -2.29
UBC7	YMR022W	CSI2	Q08054	341 aa		0.73	□□□□□ -2.29
UBC7	YMR022W	RPL13A	Q12690	199 aa	Predicted RBP	0.73	□□□□□ -2.29
UBC7	YMR022W	RIF1	P29539	1916 aa		0.73	□□□□□ -2.29
UBC7	YMR022W	DDI2	P0CH63	225 aa		0.72	□□□□□ -2.29
UBC7	YMR022W	DDI3	P0CH64	225 aa		0.72	□□□□□ -2.29
UBC7	YMR022W	UGA1	P17649	471 aa		0.72	□□□□□ -2.29
UBC7	YMR022W	DAL82	P21705	255 aa		0.72	□□□□□ -2.29
UBC7	YMR022W	SRX1	P36077	127 aa		0.72	□□□□□ -2.29
UBC7	YMR022W	HSM3	P38348	480 aa		0.72	□□□□□ -2.29
UBC7	YMR022W	YIL001W	P40560	513 aa		0.72	□□□□□ -2.29
UBC7	YMR022W	SPP2	Q02521	185 aa		0.72	□□□□□ -2.29
UBC7	YMR022W	ABZ2	Q03266	374 aa		0.72	□□□□□ -2.29
UBC7	YMR022W	GOT1	Q03554	138 aa		0.72	□□□□□ -2.29
UBC7	YMR022W	CUR1	Q06469	252 aa		0.72	□□□□□ -2.29
UBC7	YMR022W	YOL024W	Q08172	172 aa		0.72	□□□□□ -2.29
UBC7	YMR022W	EMP46	Q12396	444 aa		0.72	□□□□□ -2.29
UBC7	YMR022W	CYR1	P08678	2026 aa	Known RBP	0.72	□□□□□ -2.29
UBC7	YMR022W	YLR462W	O13556	202 aa		0.71	□□□□□ -2.3
UBC7	YMR022W	MSW1	P04803	379 aa		0.71	□□□□□ -2.3
UBC7	YMR022W	POF1	P25576	258 aa		0.71	□□□□□ -2.3
UBC7	YMR022W	PEX34	P25584	144 aa		0.71	□□□□□ -2.3
UBC7	YMR022W	YEL075C	P39972	122 aa		0.71	□□□□□ -2.3
UBC7	YMR022W	YER189W	P40104	122 aa		0.71	□□□□□ -2.3
UBC7	YMR022W	MNT4	P53745	580 aa		0.71	□□□□□ -2.3
UBC7	YMR022W	SPO19	Q03029	223 aa		0.71	□□□□□ -2.3
UBC7	YMR022W	SME1	Q12330	94 aa	Predicted RBP	0.71	□□□□□ -2.3
UBC7	YMR022W	FLO9	P39712	1322 aa		0.7	□□□□□ -2.3
UBC7	YMR022W	RPL2A	P0CX45	254 aa	Known RBP	0.7	□□□□□ -2.3
UBC7	YMR022W	RPL2B	P0CX46	254 aa	Known RBP	0.7	□□□□□ -2.3
UBC7	YMR022W	GLE2	P40066	365 aa		0.7	□□□□□ -2.3
UBC7	YMR022W	SWS2	P53937	143 aa		0.7	□□□□□ -2.3
UBC7	YMR022W	FAR8	Q05040	523 aa		0.7	□□□□□ -2.3
UBC7	YMR022W	YPR147C	Q06522	304 aa	Known RBP	0.7	□□□□□ -2.3
UBC7	YMR022W	PGC1	Q08959	321 aa		0.7	□□□□□ -2.3
UBC7	YMR022W	YIL002W-A	Q3E7Z5	69 aa		0.7	□□□□□ -2.3
UBC7	YMR022W	GPA2	P10823	449 aa		0.69	□□□□□ -2.3
UBC7	YMR022W	VPS3	P23643	1011 aa		0.69	□□□□□ -2.3
UBC7	YMR022W	RCY1	P39531	840 aa		0.69	□□□□□ -2.3
UBC7	YMR022W	OSW5	P40219	148 aa		0.69	□□□□□ -2.3
UBC7	YMR022W	FIS1	P40515	155 aa		0.69	□□□□□ -2.3
UBC7	YMR022W	AGE2	P40529	298 aa		0.69	□□□□□ -2.3
UBC7	YMR022W	YJR012C	P47087	207 aa		0.69	□□□□□ -2.3
UBC7	YMR022W	RMR1	P53060	241 aa		0.69	□□□□□ -2.3
UBC7	YMR022W	YMR321C	Q04898	105 aa		0.69	□□□□□ -2.3
UBC7	YMR022W	SML1	Q04964	104 aa		0.69	□□□□□ -2.3
UBC7	YMR022W	YDR286C	Q05530	114 aa		0.69	□□□□□ -2.3
UBC7	YMR022W	ATG17	Q06410	417 aa		0.69	□□□□□ -2.3
UBC7	YMR022W	SSA3	P09435	649 aa	Known RBP	0.68	□□□□□ -2.3
UBC7	YMR022W	MET16	P18408	261 aa	Predicted RBP	0.68	□□□□□ -2.3
UBC7	YMR022W	SVP26	P38869	228 aa		0.68	□□□□□ -2.3
UBC7	YMR022W	LOC1	P43586	204 aa	Predicted RBP	0.68	□□□□□ -2.3
UBC7	YMR022W	YFH7	P43591	353 aa		0.68	□□□□□ -2.3
UBC7	YMR022W	YGL185C	P53100	379 aa		0.68	□□□□□ -2.3
UBC7	YMR022W	ERV41	Q04651	352 aa		0.68	□□□□□ -2.3
UBC7	YMR022W	NEJ1	Q06148	342 aa		0.68	□□□□□ -2.3
UBC7	YMR022W	YLR179C	Q06252	201 aa	Known RBP	0.68	□□□□□ -2.3
UBC7	YMR022W	YPL162C	Q12042	273 aa		0.68	□□□□□ -2.3
UBC7	YMR022W	MDY2	Q12285	212 aa		0.68	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 49.7 ms