RNA–Protein interactions for RNA: YLR086W

SMC4, Transcript of Subunit of the condensin complex, yeast

Gene SMC4, Length 4,257 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SMC4	YLR086W	QCR7	P00128	127 aa		1.15	□□□□□ -2.23
SMC4	YLR086W	BCY1	P07278	416 aa	Known RBP	1.15	□□□□□ -2.23
SMC4	YLR086W	MET2	P08465	486 aa		1.15	□□□□□ -2.23
SMC4	YLR086W	MRP1	P10662	321 aa	Known RBP	1.15	□□□□□ -2.23
SMC4	YLR086W	SPS100	P13130	326 aa		1.15	□□□□□ -2.23
SMC4	YLR086W	RPL24B	P24000	155 aa	Known RBP	1.15	□□□□□ -2.23
SMC4	YLR086W	MEI4	P29467	408 aa		1.15	□□□□□ -2.23
SMC4	YLR086W	CAT2	P32796	670 aa	Known RBP	1.15	□□□□□ -2.23
SMC4	YLR086W	YHL026C	P38740	315 aa		1.15	□□□□□ -2.23
SMC4	YLR086W	RPL13B	P40212	199 aa	Known RBP	1.15	□□□□□ -2.23
SMC4	YLR086W	TIF34	P40217	347 aa	Known RBP	1.15	□□□□□ -2.23
SMC4	YLR086W	MZM1	Q03429	123 aa	Predicted RBP	1.15	□□□□□ -2.23
SMC4	YLR086W	FCF1	Q05498	189 aa	Predicted RBP	1.15	□□□□□ -2.23
SMC4	YLR086W	YNG1	Q08465	219 aa		1.15	□□□□□ -2.23
SMC4	YLR086W	BTS1	Q12051	335 aa		1.15	□□□□□ -2.23
SMC4	YLR086W	RPL13A	Q12690	199 aa	Predicted RBP	1.15	□□□□□ -2.23
SMC4	YLR086W	ISD11	Q6Q560	94 aa		1.15	□□□□□ -2.23
SMC4	YLR086W	RPS14A	P06367	137 aa	Known RBP	1.14	□□□□□ -2.23
SMC4	YLR086W	CPT1	P17898	393 aa		1.14	□□□□□ -2.23
SMC4	YLR086W	TOM40	P23644	387 aa	Known RBP	1.14	□□□□□ -2.23
SMC4	YLR086W	QRI5	P32344	111 aa		1.14	□□□□□ -2.23
SMC4	YLR086W	URA8	P38627	578 aa	Predicted RBP	1.14	□□□□□ -2.23
SMC4	YLR086W	GOS1	P38736	223 aa		1.14	□□□□□ -2.23
SMC4	YLR086W	RPS14B	P39516	138 aa	Known RBP	1.14	□□□□□ -2.23
SMC4	YLR086W	EDC3	P39998	551 aa	Known RBP	1.14	□□□□□ -2.23
SMC4	YLR086W	YJR012C	P47087	207 aa		1.14	□□□□□ -2.23
SMC4	YLR086W	INP1	Q03694	420 aa		1.14	□□□□□ -2.23
SMC4	YLR086W	YOL024W	Q08172	172 aa		1.14	□□□□□ -2.23
SMC4	YLR086W	ADF1	Q2V2Q1	113 aa		1.14	□□□□□ -2.23
SMC4	YLR086W	POX1	P13711	748 aa		1.14	□□□□□ -2.23
SMC4	YLR086W	COQ1	P18900	473 aa		1.14	□□□□□ -2.23
SMC4	YLR086W	MGT1	P26188	188 aa		1.14	□□□□□ -2.23
SMC4	YLR086W	VMA6	P32366	345 aa	Known RBP	1.14	□□□□□ -2.23
SMC4	YLR086W	CAF4	P36130	643 aa		1.14	□□□□□ -2.23
SMC4	YLR086W	UTH1	P36135	365 aa		1.14	□□□□□ -2.23
SMC4	YLR086W	SPL2	P38839	148 aa		1.14	□□□□□ -2.23
SMC4	YLR086W	BDH1	P39714	382 aa		1.14	□□□□□ -2.23
SMC4	YLR086W	AVT7	P40501	490 aa		1.14	□□□□□ -2.23
SMC4	YLR086W	BNA6	P43619	295 aa		1.14	□□□□□ -2.23
SMC4	YLR086W	OST6	Q03723	332 aa		1.14	□□□□□ -2.23
SMC4	YLR086W	PEX10	Q05568	337 aa		1.14	□□□□□ -2.23
SMC4	YLR086W	CTR3	Q06686	241 aa		1.14	□□□□□ -2.23
SMC4	YLR086W	IES4	Q08561	116 aa		1.14	□□□□□ -2.23
SMC4	YLR086W	POM33	Q12164	279 aa		1.14	□□□□□ -2.23
SMC4	YLR086W	FLO1	P32768	1537 aa		1.14	□□□□□ -2.23
SMC4	YLR086W	CCA1	P21269	546 aa		1.14	□□□□□ -2.23
SMC4	YLR086W	PRE7	P23724	241 aa	Known RBP	1.14	□□□□□ -2.23
SMC4	YLR086W	YCR102C	P25608	368 aa		1.14	□□□□□ -2.23
SMC4	YLR086W	YCR016W	P25617	290 aa	Known RBP	1.14	□□□□□ -2.23
SMC4	YLR086W	SHG1	P38337	142 aa		1.14	□□□□□ -2.23
SMC4	YLR086W	EGD2	P38879	174 aa	Known RBP	1.14	□□□□□ -2.23
SMC4	YLR086W	MTW1	P39731	289 aa		1.14	□□□□□ -2.23
SMC4	YLR086W	YER189W	P40104	122 aa		1.14	□□□□□ -2.23
SMC4	YLR086W	FAR7	P43592	221 aa		1.14	□□□□□ -2.23
SMC4	YLR086W	SNX4	P47057	423 aa		1.14	□□□□□ -2.23
SMC4	YLR086W	APS3	P47064	194 aa		1.14	□□□□□ -2.23
SMC4	YLR086W	HAM1	P47119	197 aa	Known RBP	1.14	□□□□□ -2.23
SMC4	YLR086W	VEL1	P53058	206 aa		1.14	□□□□□ -2.23
SMC4	YLR086W	YGL118C	P53132	145 aa		1.14	□□□□□ -2.23
SMC4	YLR086W	USE1	P53146	245 aa		1.14	□□□□□ -2.23
SMC4	YLR086W	MRPS17	Q03246	237 aa	Predicted RBP	1.14	□□□□□ -2.23
SMC4	YLR086W	NNT1	Q05874	261 aa		1.14	□□□□□ -2.23
SMC4	YLR086W	SEI1	Q06058	285 aa		1.14	□□□□□ -2.23
SMC4	YLR086W	YOR186W	Q08560	144 aa		1.14	□□□□□ -2.23
SMC4	YLR086W	YDL211C	Q12121	372 aa		1.14	□□□□□ -2.23
SMC4	YLR086W	FKS1	P38631	1876 aa	Known RBP	1.14	□□□□□ -2.23
SMC4	YLR086W	CDC36	P06100	191 aa	Predicted RBP	1.13	□□□□□ -2.23
SMC4	YLR086W	HIS3	P06633	220 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	SGA1	P08019	549 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	1.13	□□□□□ -2.23	not detected
SMC4	YLR086W	ECM14	P38836	430 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	SEN34	P39707	275 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	YIR035C	P40579	254 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	BUD13	P46947	266 aa	Predicted RBP	1.13	□□□□□ -2.23
SMC4	YLR086W	JHD2	P47156	728 aa	Predicted RBP	1.13	□□□□□ -2.23
SMC4	YLR086W	RPS12	P48589	143 aa	Known RBP	1.13	□□□□□ -2.23
SMC4	YLR086W	NOP19	P53317	196 aa	Predicted RBP	1.13	□□□□□ -2.23
SMC4	YLR086W	FMP41	P53889	259 aa	Known RBP	1.13	□□□□□ -2.23
SMC4	YLR086W	PET191	Q02772	108 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	CSN9	Q03981	162 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	YMR114C	Q04471	368 aa	Known RBP	1.13	□□□□□ -2.23
SMC4	YLR086W	YDR124W	Q04608	324 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	FAR8	Q05040	523 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	MCH1	Q07376	486 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	YOL029C	Q08187	201 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	SAS5	Q99314	248 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	PMD1	P32634	1753 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	YLR462W	O13556	202 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	YAK1	P14680	807 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	MRPS28	P21771	286 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	YCR025C	P25352	136 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	RSA4	P25382	515 aa	Known RBP	1.13	□□□□□ -2.23
SMC4	YLR086W	GDH2	P33327	1092 aa	Known RBP	1.13	□□□□□ -2.23
SMC4	YLR086W	YOR062C	P36025	268 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	FES1	P38260	290 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	PHO88	P38264	188 aa	Predicted RBP	1.13	□□□□□ -2.23
SMC4	YLR086W	YEL075C	P39972	122 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	COG3	P40094	801 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	YRB2	P40517	327 aa		1.13	□□□□□ -2.23
SMC4	YLR086W	YJL118W	P47022	219 aa		1.13	□□□□□ -2.23

Retrieved 100 of 5,963 RNA–protein pairs in 14.4 ms