RNA–Protein interactions for RNA: YKL195W

MIA40, Transcript of Mitochondrial oxidoreductase, yeast

Gene MIA40, Length 1,212 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MIA40	YKL195W	SRB7	P47822	140 aa		5.69	□□□□□ -1.5
MIA40	YKL195W	PNC1	P53184	216 aa	Known RBP	5.69	□□□□□ -1.5
MIA40	YKL195W	CWC25	P53854	179 aa	Known RBP	5.69	□□□□□ -1.5
MIA40	YKL195W	YDR209C	Q03480	137 aa		5.69	□□□□□ -1.5
MIA40	YKL195W	YLR108C	Q12259	485 aa		5.69	□□□□□ -1.5
MIA40	YKL195W	YLR146W-A	Q2V2P1	62 aa		5.69	□□□□□ -1.5
MIA40	YKL195W	Q0144	Q9ZZW2	109 aa		5.69	□□□□□ -1.5
MIA40	YKL195W	REP2	P03872	296 aa		5.68	□□□□□ -1.5
MIA40	YKL195W	TRR1	P29509	319 aa	Known RBP	5.68	□□□□□ -1.5
MIA40	YKL195W	ECM25	P32525	599 aa		5.68	□□□□□ -1.5
MIA40	YKL195W	VMA8	P32610	256 aa	Known RBP	5.68	□□□□□ -1.5
MIA40	YKL195W	FIG1	P38224	298 aa		5.68	□□□□□ -1.5
MIA40	YKL195W	PET100	P38958	111 aa		5.68	□□□□□ -1.5
MIA40	YKL195W	GLR1	P41921	483 aa	Known RBP	5.68	□□□□□ -1.5
MIA40	YKL195W	UFD1	P53044	361 aa		5.68	□□□□□ -1.5
MIA40	YKL195W	NSA1	P53136	463 aa	Predicted RBP	5.68	□□□□□ -1.5
MIA40	YKL195W	PCP1	P53259	346 aa		5.68	□□□□□ -1.5
MIA40	YKL195W	ACT1	P60010	375 aa	Known RBP	5.68	□□□□□ -1.5
MIA40	YKL195W	SRP1	Q02821	542 aa	Known RBP	5.68	□□□□□ -1.5
MIA40	YKL195W	RRT7	Q07829	113 aa		5.68	□□□□□ -1.5
MIA40	YKL195W	MED4	Q12343	284 aa		5.68	□□□□□ -1.5
MIA40	YKL195W	CDC28	P00546	298 aa	Known RBP	5.67	□□□□□ -1.5
MIA40	YKL195W	CBP6	P07253	162 aa	Predicted RBP	5.67	□□□□□ -1.5
MIA40	YKL195W	CKA1	P15790	372 aa		5.67	□□□□□ -1.5
MIA40	YKL195W	EMP24	P32803	203 aa	Known RBP	5.67	□□□□□ -1.5
MIA40	YKL195W	RPL13B	P40212	199 aa	Known RBP	5.67	□□□□□ -1.5
MIA40	YKL195W	YIL169C	P40442	995 aa		5.67	□□□□□ -1.5
MIA40	YKL195W	IKS1	P47042	667 aa		5.67	□□□□□ -1.5
MIA40	YKL195W	BUL1	P48524	976 aa		5.67	□□□□□ -1.5
MIA40	YKL195W	PKP2	P53170	491 aa		5.67	□□□□□ -1.5
MIA40	YKL195W	HHT1	P61830	136 aa		5.67	□□□□□ -1.5
MIA40	YKL195W	NRG1	Q03125	231 aa		5.67	□□□□□ -1.5
MIA40	YKL195W	YAP6	Q03935	383 aa		5.67	□□□□□ -1.5
MIA40	YKL195W	COQ11	Q05892	277 aa		5.67	□□□□□ -1.5
MIA40	YKL195W	BER1	Q06688	274 aa	Known RBP	5.67	□□□□□ -1.5
MIA40	YKL195W	GRC3	Q07845	632 aa		5.67	□□□□□ -1.5
MIA40	YKL195W	YDL180W	Q12301	547 aa		5.67	□□□□□ -1.5
MIA40	YKL195W	RPL13A	Q12690	199 aa	Predicted RBP	5.67	□□□□□ -1.5
MIA40	YKL195W	FLO9	P39712	1322 aa		5.67	□□□□□ -1.5
MIA40	YKL195W	HFA1	P32874	2273 aa		5.67	□□□□□ -1.5
MIA40	YKL195W	RPL25	P04456	142 aa	Known RBP	5.66	□□□□□ -1.5
MIA40	YKL195W	QCR2	P07257	368 aa		5.66	□□□□□ -1.5
MIA40	YKL195W	YLL053C	P0CD98	152 aa		5.66	□□□□□ -1.5
MIA40	YKL195W	ARO3	P14843	370 aa	Known RBP	5.66	□□□□□ -1.5
MIA40	YKL195W	ZRC1	P20107	442 aa		5.66	□□□□□ -1.5
MIA40	YKL195W	RPD3	P32561	433 aa		5.66	□□□□□ -1.5
MIA40	YKL195W	SRB6	P32570	121 aa		5.66	□□□□□ -1.5
MIA40	YKL195W	SNN1	P48232	102 aa		5.66	□□□□□ -1.5
MIA40	YKL195W	PHO23	P50947	330 aa		5.66	□□□□□ -1.5
MIA40	YKL195W	YGL117W	P53133	265 aa		5.66	□□□□□ -1.5
MIA40	YKL195W	SLX9	P53251	210 aa	Predicted RBP	5.66	□□□□□ -1.5
MIA40	YKL195W	ATG4	P53867	494 aa		5.66	□□□□□ -1.5
MIA40	YKL195W	MRPL19	P53875	158 aa		5.66	□□□□□ -1.5
MIA40	YKL195W	INN1	P53901	409 aa		5.66	□□□□□ -1.5
MIA40	YKL195W	ERV25	P54837	211 aa	Known RBP	5.66	□□□□□ -1.5
MIA40	YKL195W	MEH1	Q02205	184 aa		5.66	□□□□□ -1.5
MIA40	YKL195W	THI74	Q04083	370 aa		5.66	□□□□□ -1.5
MIA40	YKL195W	IZH2	Q12442	317 aa		5.66	□□□□□ -1.5
MIA40	YKL195W	ISN1	Q99312	450 aa		5.66	□□□□□ -1.5
MIA40	YKL195W	GAL1	P04385	528 aa		5.65	□□□□□ -1.5
MIA40	YKL195W	SPS4	P09937	338 aa		5.65	□□□□□ -1.5
MIA40	YKL195W	UBI4	P0CG63	381 aa	Known RBP	5.65	□□□□□ -1.5
MIA40	YKL195W	RPL40A	P0CH08	128 aa	Known RBP	5.65	□□□□□ -1.5
MIA40	YKL195W	RPL40B	P0CH09	128 aa	Known RBP	5.65	□□□□□ -1.5
MIA40	YKL195W	MIR1	P23641	311 aa	Known RBP	5.65	□□□□□ -1.5
MIA40	YKL195W	LDB16	P25587	256 aa		5.65	□□□□□ -1.5
MIA40	YKL195W	YCR101C	P25607	182 aa		5.65	□□□□□ -1.5
MIA40	YKL195W	GLC7	P32598	312 aa	Known RBP	5.65	□□□□□ -1.5
MIA40	YKL195W	AGA2	P32781	87 aa		5.65	□□□□□ -1.5
MIA40	YKL195W	FAT1	P38225	669 aa		5.65	□□□□□ -1.5
MIA40	YKL195W	EMC5	P40540	141 aa		5.65	□□□□□ -1.5
MIA40	YKL195W	AGX1	P43567	385 aa		5.65	□□□□□ -1.5
MIA40	YKL195W	SSN8	P47821	323 aa		5.65	□□□□□ -1.5
MIA40	YKL195W	GPI15	P53961	229 aa		5.65	□□□□□ -1.5
MIA40	YKL195W	VPS28	Q02767	242 aa		5.65	□□□□□ -1.5
MIA40	YKL195W	HRI1	Q05905	244 aa	Known RBP	5.65	□□□□□ -1.5
MIA40	YKL195W	RFU1	Q08003	200 aa		5.65	□□□□□ -1.5
MIA40	YKL195W	YOR186W	Q08560	144 aa		5.65	□□□□□ -1.5
MIA40	YKL195W	YCT1	Q12235	531 aa		5.65	□□□□□ -1.5
MIA40	YKL195W	HUT1	Q12520	339 aa		5.65	□□□□□ -1.5
MIA40	YKL195W	YHR213W-A	Q8TGT4	77 aa		5.65	□□□□□ -1.5
MIA40	YKL195W	BLM10	P43583	2143 aa		5.65	□□□□□ -1.51
MIA40	YKL195W	DEG1	P31115	442 aa	Known RBP	5.64	□□□□□ -1.51
MIA40	YKL195W	MCH2	P36032	473 aa		5.64	□□□□□ -1.51
MIA40	YKL195W	CBT1	P36038	271 aa	Predicted RBP	5.64	□□□□□ -1.51
MIA40	YKL195W	MRPL39	P36533	70 aa		5.64	□□□□□ -1.51
MIA40	YKL195W	GWT1	P47026	490 aa		5.64	□□□□□ -1.51
MIA40	YKL195W	RPL35A	P0CX84	120 aa	Known RBP	5.63	□□□□□ -1.51
MIA40	YKL195W	RPL35B	P0CX85	120 aa	Known RBP	5.63	□□□□□ -1.51
MIA40	YKL195W	MSI1	P13712	422 aa		5.63	□□□□□ -1.51
MIA40	YKL195W	SEC62	P21825	274 aa		5.63	□□□□□ -1.51
MIA40	YKL195W	PEX4	P29340	183 aa		5.63	□□□□□ -1.51
MIA40	YKL195W	LDS1	P31379	325 aa		5.63	□□□□□ -1.51
MIA40	YKL195W	OCH1	P31755	480 aa		5.63	□□□□□ -1.51
MIA40	YKL195W	REC114	P32841	428 aa		5.63	□□□□□ -1.51
MIA40	YKL195W	ARC40	P38328	384 aa	Known RBP	5.63	□□□□□ -1.51
MIA40	YKL195W	LNP1	P38878	278 aa		5.63	□□□□□ -1.51
MIA40	YKL195W	YER079W	P40052	210 aa	Known RBP	5.63	□□□□□ -1.51
MIA40	YKL195W	SEC24	P40482	926 aa	Known RBP	5.63	□□□□□ -1.51
MIA40	YKL195W	GPP1	P41277	250 aa	Known RBP	5.63	□□□□□ -1.51

Retrieved 100 of 5,963 RNA–protein pairs in 174.7 ms