RNA–Protein interactions for RNA: YJL154C

VPS35, Transcript of Endosomal subunit of membrane-associated retromer complex, yeastyeast

Gene VPS35, Length 2,835 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS35YJL154C YHI9P38765 294 aa1.6□□□□□ -2.15
VPS35YJL154C YNL194CP40169 301 aa1.6□□□□□ -2.15
VPS35YJL154C NSA1P53136 463 aaPredicted RBP1.6□□□□□ -2.15
VPS35YJL154C NQM1P53228 333 aaPredicted RBP1.6□□□□□ -2.15
VPS35YJL154C YOR289WQ12012 251 aaPredicted RBP1.6□□□□□ -2.15
VPS35YJL154C EMP46Q12396 444 aa1.6□□□□□ -2.15
VPS35YJL154C DFM1Q12743 341 aaKnown RBP1.6□□□□□ -2.15
VPS35YJL154C YMR31P19955 123 aa1.59□□□□□ -2.15
VPS35YJL154C RFA3P26755 122 aaKnown RBP1.59□□□□□ -2.15
VPS35YJL154C UBC8P28263 218 aa1.59□□□□□ -2.15
VPS35YJL154C DER1P38307 211 aa1.59□□□□□ -2.15
VPS35YJL154C CYC2P38909 366 aa1.59□□□□□ -2.15
VPS35YJL154C SRP14P38985 146 aa1.59□□□□□ -2.15
VPS35YJL154C ASP1P38986 381 aaPredicted RBP1.59□□□□□ -2.15
VPS35YJL154C YJR111CP47148 283 aaKnown RBP1.59□□□□□ -2.15
VPS35YJL154C TAF9Q05027 157 aa1.59□□□□□ -2.15
VPS35YJL154C YOL019WQ08157 551 aa1.59□□□□□ -2.15
VPS35YJL154C IES4Q08561 116 aa1.59□□□□□ -2.15
VPS35YJL154C YPL150WQ12152 901 aa1.59□□□□□ -2.15
VPS35YJL154C PET20Q99373 253 aa1.59□□□□□ -2.15
VPS35YJL154C DBF2P22204 572 aa1.59□□□□□ -2.16
VPS35YJL154C VPS21P36017 210 aaKnown RBP1.59□□□□□ -2.16
VPS35YJL154C TRR2P38816 342 aa1.59□□□□□ -2.16
VPS35YJL154C SEN34P39707 275 aa1.59□□□□□ -2.16
VPS35YJL154C COS4P43542 379 aa1.59□□□□□ -2.16
VPS35YJL154C HOC1P47124 396 aa1.59□□□□□ -2.16
VPS35YJL154C ALG11P53954 548 aaKnown RBP1.59□□□□□ -2.16
VPS35YJL154C TAZ1Q06510 381 aa1.59□□□□□ -2.16
VPS35YJL154C CTR3Q06686 241 aa1.59□□□□□ -2.16
VPS35YJL154C RFU1Q08003 200 aa1.59□□□□□ -2.16
VPS35YJL154C NSL1Q12143 216 aa1.59□□□□□ -2.16
VPS35YJL154C POX1P13711 748 aa1.58□□□□□ -2.16
VPS35YJL154C TCA17P32613 152 aa1.58□□□□□ -2.16
VPS35YJL154C MRPL3P36516 390 aa1.58□□□□□ -2.16
VPS35YJL154C FZO1P38297 855 aa1.58□□□□□ -2.16
VPS35YJL154C YFL064CP43540 174 aa1.58□□□□□ -2.16
VPS35YJL154C TAD2P47058 250 aa1.58□□□□□ -2.16
VPS35YJL154C MOG1P47123 218 aa1.58□□□□□ -2.16
VPS35YJL154C YJR141WP47172 347 aaPredicted RBP1.58□□□□□ -2.16
VPS35YJL154C YPT32P51996 222 aaKnown RBP1.58□□□□□ -2.16
VPS35YJL154C NBP35P52920 328 aa1.58□□□□□ -2.16
VPS35YJL154C NIF3P53081 288 aa1.58□□□□□ -2.16
VPS35YJL154C YML018CQ03730 393 aa1.58□□□□□ -2.16
VPS35YJL154C YMR114CQ04471 368 aaKnown RBP1.58□□□□□ -2.16
VPS35YJL154C DYN3Q04949 312 aa1.58□□□□□ -2.16
VPS35YJL154C PEX10Q05568 337 aa1.58□□□□□ -2.16
VPS35YJL154C SNF8Q12483 233 aa1.58□□□□□ -2.16
VPS35YJL154C WIP1Q2V2P8 89 aa1.58□□□□□ -2.16
VPS35YJL154C KRE5P22023 1365 aa1.58□□□□□ -2.16
VPS35YJL154C COS2P0CX12 379 aa1.58□□□□□ -2.16
VPS35YJL154C COS3P0CX13 379 aa1.58□□□□□ -2.16
VPS35YJL154C NMT1P14743 455 aa1.58□□□□□ -2.16
VPS35YJL154C CUP2P15315 225 aa1.58□□□□□ -2.16
VPS35YJL154C URA6P15700 204 aa1.58□□□□□ -2.16
VPS35YJL154C CPT1P17898 393 aa1.58□□□□□ -2.16
VPS35YJL154C COX10P21592 462 aa1.58□□□□□ -2.16
VPS35YJL154C UPS2P35200 230 aa1.58□□□□□ -2.16
VPS35YJL154C GPX1P36014 167 aa1.58□□□□□ -2.16
VPS35YJL154C DRE2P36152 348 aa1.58□□□□□ -2.16
VPS35YJL154C PHO89P38361 574 aa1.58□□□□□ -2.16
VPS35YJL154C IKI1P38874 309 aa1.58□□□□□ -2.16
VPS35YJL154C RRG9P40156 214 aa1.58□□□□□ -2.16
VPS35YJL154C COA1P40452 197 aa1.58□□□□□ -2.16
VPS35YJL154C PEX31P53203 462 aa1.58□□□□□ -2.16
VPS35YJL154C ZRG17P53735 605 aa1.58□□□□□ -2.16
VPS35YJL154C YLR460CP54007 376 aa1.58□□□□□ -2.16
VPS35YJL154C TMA20P89886 181 aaPredicted RBP1.58□□□□□ -2.16
VPS35YJL154C ADH6Q04894 360 aaKnown RBP1.58□□□□□ -2.16
VPS35YJL154C YPL225WQ08971 146 aaKnown RBP1.58□□□□□ -2.16
VPS35YJL154C DAS2Q12084 232 aa1.58□□□□□ -2.16
VPS35YJL154C HIS1P00498 297 aaKnown RBP1.58□□□□□ -2.16
VPS35YJL154C PUT1P09368 476 aa1.58□□□□□ -2.16
VPS35YJL154C CAM1P29547 415 aaKnown RBP1.58□□□□□ -2.16
VPS35YJL154C PRX1P34227 261 aaKnown RBP1.58□□□□□ -2.16
VPS35YJL154C FRM2P37261 193 aa1.58□□□□□ -2.16
VPS35YJL154C PRS2P38620 318 aaKnown RBP1.58□□□□□ -2.16
VPS35YJL154C TRM5P38793 499 aa1.58□□□□□ -2.16
VPS35YJL154C YIL059CP40520 121 aa1.58□□□□□ -2.16
VPS35YJL154C PRM10P42946 383 aa1.58□□□□□ -2.16
VPS35YJL154C RPE1P46969 238 aa1.58□□□□□ -2.16
VPS35YJL154C SBH2P52871 88 aa1.58□□□□□ -2.16
VPS35YJL154C YGL235WP53071 178 aa1.58□□□□□ -2.16
VPS35YJL154C RNY1Q02933 434 aaKnown RBP1.58□□□□□ -2.16
VPS35YJL154C SNO1Q03144 224 aa1.58□□□□□ -2.16
VPS35YJL154C YET3Q07451 203 aa1.58□□□□□ -2.16
VPS35YJL154C HIS3P06633 220 aa1.57□□□□□ -2.16
VPS35YJL154C DPM1P14020 267 aaKnown RBP1.57□□□□□ -2.16
VPS35YJL154C EHD3P28817 500 aa1.57□□□□□ -2.16
VPS35YJL154C IDH1P28834 360 aaKnown RBP RIP-Chip data1.57□□□□□ -2.16not detected
VPS35YJL154C MDH3P32419 343 aaKnown RBP RIP-Chip data1.57□□□□□ -2.16not detected
VPS35YJL154C MRX3P38172 270 aa1.57□□□□□ -2.16
VPS35YJL154C YGR201CP42936 225 aa1.57□□□□□ -2.16
VPS35YJL154C CCC1P47818 322 aa1.57□□□□□ -2.16
VPS35YJL154C MGA1P53050 456 aa1.57□□□□□ -2.16
VPS35YJL154C JAC1P53193 184 aa1.57□□□□□ -2.16
VPS35YJL154C RSM27P53305 110 aa1.57□□□□□ -2.16
VPS35YJL154C YMD8Q03697 442 aa1.57□□□□□ -2.16
VPS35YJL154C YML108WQ03759 105 aa1.57□□□□□ -2.16
VPS35YJL154C SFH1Q06168 426 aa1.57□□□□□ -2.16
VPS35YJL154C IES3Q12345 250 aa1.57□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 57.7 ms