RNA–Protein interactions for RNA: YIL156W

UBP7, Transcript of Ubiquitin-specific protease that cleaves ubiquitin-protein fusions, yeast

Gene UBP7, Length 3,216 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
UBP7	YIL156W	SDS23	P53172	527 aa		4.16	□□□□□ -1.74
UBP7	YIL156W	FMP41	P53889	259 aa	Known RBP	4.16	□□□□□ -1.74
UBP7	YIL156W	MGT1	P26188	188 aa		4.16	□□□□□ -1.74
UBP7	YIL156W	CLG1	P35190	452 aa		4.16	□□□□□ -1.74
UBP7	YIL156W	CLD1	P53264	445 aa		4.16	□□□□□ -1.74
UBP7	YIL156W	YLR053C	Q12026	108 aa		4.16	□□□□□ -1.74
UBP7	YIL156W	IGO2	Q9P305	131 aa		4.16	□□□□□ -1.74
UBP7	YIL156W	PET54	P10834	293 aa		4.15	□□□□□ -1.74
UBP7	YIL156W	TRX3	P25372	127 aa		4.15	□□□□□ -1.74
UBP7	YIL156W	PSA1	P41940	361 aa	Known RBP	4.15	□□□□□ -1.74
UBP7	YIL156W	EGT2	P42835	1041 aa		4.15	□□□□□ -1.74
UBP7	YIL156W	YFL067W	P43537	175 aa		4.15	□□□□□ -1.74
UBP7	YIL156W	YNL046W	P53956	172 aa		4.15	□□□□□ -1.74
UBP7	YIL156W	YOL024W	Q08172	172 aa		4.15	□□□□□ -1.74
UBP7	YIL156W	SEN2	P16658	377 aa		4.15	□□□□□ -1.75
UBP7	YIL156W	YGL204C	P53089	101 aa		4.15	□□□□□ -1.75
UBP7	YIL156W	YDR248C	Q03786	193 aa		4.15	□□□□□ -1.75
UBP7	YIL156W	LIP2	Q06005	328 aa		4.15	□□□□□ -1.75
UBP7	YIL156W	YPL278C	Q08990	100 aa		4.15	□□□□□ -1.75
UBP7	YIL156W	RAX2	Q12465	1220 aa		4.15	□□□□□ -1.75
UBP7	YIL156W	SEC1	P30619	724 aa	Known RBP	4.14	□□□□□ -1.75
UBP7	YIL156W	YNL208W	P40159	199 aa	Known RBP	4.14	□□□□□ -1.75
UBP7	YIL156W	PDS1	P40316	373 aa	Predicted RBP	4.14	□□□□□ -1.75
UBP7	YIL156W	ERD2	P18414	219 aa		4.14	□□□□□ -1.75
UBP7	YIL156W	CAT2	P32796	670 aa	Known RBP	4.14	□□□□□ -1.75
UBP7	YIL156W	YJR054W	P47114	497 aa		4.14	□□□□□ -1.75
UBP7	YIL156W	MRH4	P53166	561 aa		4.14	□□□□□ -1.75
UBP7	YIL156W	YPL113C	Q02961	396 aa		4.14	□□□□□ -1.75
UBP7	YIL156W	YLR177W	Q06251	628 aa		4.14	□□□□□ -1.75
UBP7	YIL156W	YPR127W	Q06494	345 aa		4.14	□□□□□ -1.75
UBP7	YIL156W	YOR186W	Q08560	144 aa		4.14	□□□□□ -1.75
UBP7	YIL156W	RDI1	Q12434	202 aa		4.14	□□□□□ -1.75
UBP7	YIL156W	ILV6	P25605	309 aa	Known RBP	4.14	□□□□□ -1.75
UBP7	YIL156W	UBC8	P28263	218 aa		4.14	□□□□□ -1.75
UBP7	YIL156W	ECM14	P38836	430 aa		4.14	□□□□□ -1.75
UBP7	YIL156W	PET191	Q02772	108 aa		4.14	□□□□□ -1.75
UBP7	YIL156W	BNS1	P50084	137 aa		4.13	□□□□□ -1.75
UBP7	YIL156W	YGR018C	P53211	109 aa		4.13	□□□□□ -1.75
UBP7	YIL156W	MSA1	Q08471	629 aa		4.13	□□□□□ -1.75
UBP7	YIL156W	MCK1	P21965	375 aa	Known RBP	4.13	□□□□□ -1.75
UBP7	YIL156W	PEX2	P32800	271 aa		4.13	□□□□□ -1.75
UBP7	YIL156W	SOL2	P37262	315 aa		4.13	□□□□□ -1.75
UBP7	YIL156W	CYC2	P38909	366 aa		4.13	□□□□□ -1.75
UBP7	YIL156W	PEX17	P40155	199 aa		4.13	□□□□□ -1.75
UBP7	YIL156W	PSK1	P31374	1356 aa		4.12	□□□□□ -1.75
UBP7	YIL156W	RPB5	P20434	215 aa		4.12	□□□□□ -1.75
UBP7	YIL156W	YIL152W	P40455	235 aa		4.12	□□□□□ -1.75
UBP7	YIL156W	MOG1	P47123	218 aa		4.12	□□□□□ -1.75
UBP7	YIL156W	CWC25	P53854	179 aa	Known RBP	4.12	□□□□□ -1.75
UBP7	YIL156W	CPR4	P25334	318 aa		4.12	□□□□□ -1.75
UBP7	YIL156W	ARO7	P32178	256 aa		4.12	□□□□□ -1.75
UBP7	YIL156W	APS1	P35181	156 aa		4.12	□□□□□ -1.75
UBP7	YIL156W	AIM25	P47140	327 aa		4.12	□□□□□ -1.75
UBP7	YIL156W	FMP42	Q04991	504 aa		4.12	□□□□□ -1.75
UBP7	YIL156W	PCI8	P40512	444 aa		4.12	□□□□□ -1.75
UBP7	YIL156W	COS10	P52924	374 aa		4.12	□□□□□ -1.75
UBP7	YIL156W	CRH1	P53301	507 aa		4.12	□□□□□ -1.75
UBP7	YIL156W	COS6	P53344	381 aa		4.12	□□□□□ -1.75
UBP7	YIL156W	SYC1	Q08553	188 aa	Predicted RBP	4.12	□□□□□ -1.75
UBP7	YIL156W	NAG1	Q8TGN9	163 aa		4.12	□□□□□ -1.75
UBP7	YIL156W	IMP1	P28627	190 aa		4.11	□□□□□ -1.75
UBP7	YIL156W	TIP20	P33891	701 aa		4.11	□□□□□ -1.75
UBP7	YIL156W	PRY2	P36110	329 aa		4.11	□□□□□ -1.75
UBP7	YIL156W	POP8	P38208	133 aa		4.11	□□□□□ -1.75
UBP7	YIL156W	YGR015C	P53208	328 aa		4.11	□□□□□ -1.75
UBP7	YIL156W	AAH1	P53909	347 aa		4.11	□□□□□ -1.75
UBP7	YIL156W	COG5	P53951	403 aa		4.11	□□□□□ -1.75
UBP7	YIL156W	COS2	P0CX12	379 aa		4.11	□□□□□ -1.75
UBP7	YIL156W	COS3	P0CX13	379 aa		4.11	□□□□□ -1.75
UBP7	YIL156W	RPS8A	P0CX39	200 aa	Known RBP	4.11	□□□□□ -1.75
UBP7	YIL156W	RPS8B	P0CX40	200 aa	Known RBP	4.11	□□□□□ -1.75
UBP7	YIL156W	SEC22	P22214	214 aa		4.11	□□□□□ -1.75
UBP7	YIL156W	UPS2	P35200	230 aa		4.11	□□□□□ -1.75
UBP7	YIL156W	COS4	P43542	379 aa		4.11	□□□□□ -1.75
UBP7	YIL156W	ATG18	P43601	500 aa		4.11	□□□□□ -1.75
UBP7	YIL156W	YGL034C	P53186	121 aa		4.11	□□□□□ -1.75
UBP7	YIL156W	DYN3	Q04949	312 aa		4.11	□□□□□ -1.75
UBP7	YIL156W	CSE2	P33308	149 aa		4.1	□□□□□ -1.75
UBP7	YIL156W	YIL067C	P40514	678 aa		4.1	□□□□□ -1.75
UBP7	YIL156W	FAR7	P43592	221 aa		4.1	□□□□□ -1.75
UBP7	YIL156W	GOT1	Q03554	138 aa		4.1	□□□□□ -1.75
UBP7	YIL156W	YLR030W	Q07967	263 aa		4.1	□□□□□ -1.75
UBP7	YIL156W	YOR376W	Q08900	122 aa		4.1	□□□□□ -1.75
UBP7	YIL156W	SEC4	P07560	215 aa	Known RBP	4.1	□□□□□ -1.75
UBP7	YIL156W	ARN2	P38724	620 aa		4.1	□□□□□ -1.75
UBP7	YIL156W	SPL2	P38839	148 aa		4.1	□□□□□ -1.75
UBP7	YIL156W	YNL184C	P53876	108 aa		4.1	□□□□□ -1.75
UBP7	YIL156W	PEX11	Q12462	236 aa		4.1	□□□□□ -1.75
UBP7	YIL156W	YFL064C	P43540	174 aa		4.1	□□□□□ -1.75
UBP7	YIL156W	UBC12	P52491	188 aa		4.1	□□□□□ -1.75
UBP7	YIL156W	MDM32	Q12171	622 aa		4.1	□□□□□ -1.75
UBP7	YIL156W	TIR4	Q12218	487 aa	Predicted RBP	4.1	□□□□□ -1.75
UBP7	YIL156W	CDC50	P25656	391 aa		4.09	□□□□□ -1.75
UBP7	YIL156W	SHE1	P38200	338 aa		4.09	□□□□□ -1.75
UBP7	YIL156W	NVJ1	P38881	321 aa		4.09	□□□□□ -1.75
UBP7	YIL156W	OXA1	P39952	402 aa		4.09	□□□□□ -1.75
UBP7	YIL156W	YND1	P40009	630 aa		4.09	□□□□□ -1.75
UBP7	YIL156W	YIL012W	P40551	113 aa		4.09	□□□□□ -1.75
UBP7	YIL156W	YHR139C-A	O13536	103 aa		4.09	□□□□□ -1.76
UBP7	YIL156W	BGL2	P15703	313 aa	Known RBP	4.09	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms