RNA–Protein interactions for RNA: YHR027C

RPN1, Transcript of Non-ATPase base subunit of the 19S RP of the 26S proteasome, yeastyeast

Gene RPN1, Length 2,982 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPN1YHR027C DPP1Q05521 289 aa2.81□□□□□ -1.96
RPN1YHR027C PIN2Q12057 282 aa2.81□□□□□ -1.96
RPN1YHR027C HEM13P11353 328 aaKnown RBP2.81□□□□□ -1.96
RPN1YHR027C ATP10P18496 279 aa2.81□□□□□ -1.96
RPN1YHR027C ANB1P19211 157 aa2.81□□□□□ -1.96
RPN1YHR027C ESS1P22696 170 aa2.81□□□□□ -1.96
RPN1YHR027C GPI12P23797 304 aa2.81□□□□□ -1.96
RPN1YHR027C LRE1P25579 583 aaKnown RBP2.81□□□□□ -1.96
RPN1YHR027C MRP49P32388 137 aa2.81□□□□□ -1.96
RPN1YHR027C MDL1P33310 695 aa2.81□□□□□ -1.96
RPN1YHR027C SOR1P35497 357 aaKnown RBP2.81□□□□□ -1.96
RPN1YHR027C UBS1P38290 277 aa2.81□□□□□ -1.96
RPN1YHR027C DER1P38307 211 aa2.81□□□□□ -1.96
RPN1YHR027C YPT35P38815 214 aaKnown RBP2.81□□□□□ -1.96
RPN1YHR027C PSD1P39006 500 aa2.81□□□□□ -1.96
RPN1YHR027C YNL198CP40166 100 aa2.81□□□□□ -1.96
RPN1YHR027C NAS2P40555 220 aa2.81□□□□□ -1.96
RPN1YHR027C YPS6P40583 537 aa2.81□□□□□ -1.96
RPN1YHR027C ATG27P46989 271 aa2.81□□□□□ -1.96
RPN1YHR027C PET130P47065 347 aa2.81□□□□□ -1.96
RPN1YHR027C BNA2P47125 453 aa2.81□□□□□ -1.96
RPN1YHR027C MSY1P48527 492 aa2.81□□□□□ -1.96
RPN1YHR027C YGR015CP53208 328 aa2.81□□□□□ -1.96
RPN1YHR027C RTT102P53330 157 aa2.81□□□□□ -1.96
RPN1YHR027C TEX1P53851 422 aaKnown RBP2.81□□□□□ -1.96
RPN1YHR027C ATG4P53867 494 aa2.81□□□□□ -1.96
RPN1YHR027C ELP4Q02884 456 aaKnown RBP2.81□□□□□ -1.96
RPN1YHR027C SDH7Q04401 133 aa2.81□□□□□ -1.96
RPN1YHR027C SEI1Q06058 285 aa2.81□□□□□ -1.96
RPN1YHR027C BLS1Q06071 122 aa2.81□□□□□ -1.96
RPN1YHR027C SOR2Q07786 357 aa2.81□□□□□ -1.96
RPN1YHR027C YLR040CQ07988 224 aa2.81□□□□□ -1.96
RPN1YHR027C PRM3Q08931 133 aa2.81□□□□□ -1.96
RPN1YHR027C YCT1Q12235 531 aa2.81□□□□□ -1.96
RPN1YHR027C HEM2P05373 342 aa2.8□□□□□ -1.96
RPN1YHR027C CWP1P28319 239 aa2.8□□□□□ -1.96
RPN1YHR027C MDH3P32419 343 aaKnown RBP RIP-Chip data2.8□□□□□ -1.96not detected
RPN1YHR027C YOR062CP36025 268 aa2.8□□□□□ -1.96
RPN1YHR027C ECM33P38248 429 aaKnown RBP2.8□□□□□ -1.96
RPN1YHR027C DOG2P38773 246 aa2.8□□□□□ -1.96
RPN1YHR027C YHR127WP38833 243 aaKnown RBP2.8□□□□□ -1.96
RPN1YHR027C HMF1P40037 129 aaKnown RBP2.8□□□□□ -1.96
RPN1YHR027C YER085CP40058 173 aa2.8□□□□□ -1.96
RPN1YHR027C PRE5P40302 234 aaKnown RBP2.8□□□□□ -1.96
RPN1YHR027C OTU1P43558 301 aa2.8□□□□□ -1.96
RPN1YHR027C RPN11P43588 306 aaKnown RBP2.8□□□□□ -1.96
RPN1YHR027C IKS1P47042 667 aa2.8□□□□□ -1.96
RPN1YHR027C MUP1P50276 574 aa2.8□□□□□ -1.96
RPN1YHR027C YGL235WP53071 178 aa2.8□□□□□ -1.96
RPN1YHR027C MTC3P53077 123 aa2.8□□□□□ -1.96
RPN1YHR027C PAU12P53343 120 aa2.8□□□□□ -1.96
RPN1YHR027C YMR252CQ04814 134 aa2.8□□□□□ -1.96
RPN1YHR027C ELP6Q04868 273 aa2.8□□□□□ -1.96
RPN1YHR027C MRX8Q05473 314 aa2.8□□□□□ -1.96
RPN1YHR027C PRP11Q07350 266 aaPredicted RBP2.8□□□□□ -1.96
RPN1YHR027C ERV2Q12284 196 aa2.8□□□□□ -1.96
RPN1YHR027C IZH2Q12442 317 aa2.8□□□□□ -1.96
RPN1YHR027C ZPS1Q12512 249 aa2.8□□□□□ -1.96
RPN1YHR027C YOS1Q3E834 85 aa2.8□□□□□ -1.96
RPN1YHR027C DET1Q99288 334 aaKnown RBP2.8□□□□□ -1.96
RPN1YHR027C CUP2P15315 225 aa2.8□□□□□ -1.96
RPN1YHR027C CNE1P27825 502 aa2.8□□□□□ -1.96
RPN1YHR027C PAU16P35994 123 aa2.8□□□□□ -1.96
RPN1YHR027C DCW1P36091 449 aa2.8□□□□□ -1.96
RPN1YHR027C LDH1P38139 375 aa2.8□□□□□ -1.96
RPN1YHR027C THI2P38141 450 aa2.8□□□□□ -1.96
RPN1YHR027C PAU24P38155 120 aa2.8□□□□□ -1.96
RPN1YHR027C MIX23P38162 196 aa2.8□□□□□ -1.96
RPN1YHR027C PIC2P40035 300 aa2.8□□□□□ -1.96
RPN1YHR027C COX15P40086 486 aa2.8□□□□□ -1.96
RPN1YHR027C PMT3P47190 753 aa2.8□□□□□ -1.96
RPN1YHR027C ADD37Q03233 198 aa2.8□□□□□ -1.96
RPN1YHR027C DIC1Q06143 298 aa2.8□□□□□ -1.96
RPN1YHR027C MRH1Q12117 320 aaPredicted RBP2.8□□□□□ -1.96
RPN1YHR027C RAS1P01119 309 aa2.79□□□□□ -1.96
RPN1YHR027C CPA1P07258 411 aaKnown RBP2.79□□□□□ -1.96
RPN1YHR027C COX10P21592 462 aa2.79□□□□□ -1.96
RPN1YHR027C PRO1P32264 428 aa2.79□□□□□ -1.96
RPN1YHR027C YMC1P32331 307 aa2.79□□□□□ -1.96
RPN1YHR027C PUB1P32588 453 aaKnown RBP RIP-Chip data2.79□□□□□ -1.96not detected
RPN1YHR027C PAN3P36102 679 aaPredicted RBP2.79□□□□□ -1.96
RPN1YHR027C DOG1P38774 246 aa2.79□□□□□ -1.96
RPN1YHR027C ACA1P39970 489 aa2.79□□□□□ -1.96
RPN1YHR027C DLS1P40366 167 aa2.79□□□□□ -1.96
RPN1YHR027C TES1P41903 349 aaKnown RBP2.79□□□□□ -1.96
RPN1YHR027C SHR5P41912 237 aa2.79□□□□□ -1.96
RPN1YHR027C RPA43P46669 326 aa2.79□□□□□ -1.96
RPN1YHR027C HSV2P50079 448 aaPredicted RBP2.79□□□□□ -1.96
RPN1YHR027C ERG25P53045 309 aa2.79□□□□□ -1.96
RPN1YHR027C BOL2P53082 120 aa2.79□□□□□ -1.96
RPN1YHR027C YIP3P53633 176 aa2.79□□□□□ -1.96
RPN1YHR027C MPP6P53725 186 aaPredicted RBP2.79□□□□□ -1.96
RPN1YHR027C YNL034WP53963 612 aa2.79□□□□□ -1.96
RPN1YHR027C ARA2Q04212 335 aa2.79□□□□□ -1.96
RPN1YHR027C TAZ1Q06510 381 aa2.79□□□□□ -1.96
RPN1YHR027C RRT7Q07829 113 aa2.79□□□□□ -1.96
RPN1YHR027C GEP5Q12393 293 aa2.79□□□□□ -1.96
RPN1YHR027C Q0010Q9ZZX9 128 aa2.79□□□□□ -1.96
RPN1YHR027C RPL27AP0C2H6 136 aaKnown RBP2.79□□□□□ -1.96
RPN1YHR027C RPL27BP0C2H7 136 aaKnown RBP2.79□□□□□ -1.96
Retrieved 100 of 5,963 RNA–protein pairs in 55.7 ms