RNA–Protein interactions for RNA: YGR006W

PRP18, Transcript of Splicing factor and component of snRNP U5, yeastyeast

Gene PRP18, Length 756 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP18YGR006W RRS1Q08746 203 aaKnown RBP2.47□□□□□ -2.01
PRP18YGR006W YCT1Q12235 531 aa2.47□□□□□ -2.01
PRP18YGR006W EMP46Q12396 444 aa2.47□□□□□ -2.01
PRP18YGR006W RPL28P02406 149 aaKnown RBP2.46□□□□□ -2.02
PRP18YGR006W EHD3P28817 500 aa2.46□□□□□ -2.02
PRP18YGR006W CLB6P32943 380 aa2.46□□□□□ -2.02
PRP18YGR006W GOS1P38736 223 aa2.46□□□□□ -2.02
PRP18YGR006W IKI1P38874 309 aa2.46□□□□□ -2.02
PRP18YGR006W GIM4P40005 111 aaKnown RBP2.46□□□□□ -2.02
PRP18YGR006W COG3P40094 801 aa2.46□□□□□ -2.02
PRP18YGR006W TIF34P40217 347 aaKnown RBP2.46□□□□□ -2.02
PRP18YGR006W ICE2P40499 491 aa2.46□□□□□ -2.02
PRP18YGR006W GON7P46984 123 aa2.46□□□□□ -2.02
PRP18YGR006W YJL016WP47072 561 aa2.46□□□□□ -2.02
PRP18YGR006W YJR149WP47177 404 aa2.46□□□□□ -2.02
PRP18YGR006W SPG4Q04438 115 aa2.46□□□□□ -2.02
PRP18YGR006W YPR011CQ12251 326 aa2.46□□□□□ -2.02
PRP18YGR006W JLP1Q12358 412 aa2.46□□□□□ -2.02
PRP18YGR006W PET20Q99373 253 aa2.46□□□□□ -2.02
PRP18YGR006W SIR4P11978 1358 aa2.46□□□□□ -2.02
PRP18YGR006W PUT1P09368 476 aa2.45□□□□□ -2.02
PRP18YGR006W SEN2P16658 377 aa2.45□□□□□ -2.02
PRP18YGR006W YCR102CP25608 368 aa2.45□□□□□ -2.02
PRP18YGR006W PRX1P34227 261 aaKnown RBP2.45□□□□□ -2.02
PRP18YGR006W SRP102P36057 244 aaPredicted RBP2.45□□□□□ -2.02
PRP18YGR006W YER189WP40104 122 aa2.45□□□□□ -2.02
PRP18YGR006W SOK1P40317 901 aa2.45□□□□□ -2.02
PRP18YGR006W YJR079WP47126 109 aa2.45□□□□□ -2.02
PRP18YGR006W MGA1P53050 456 aa2.45□□□□□ -2.02
PRP18YGR006W GCY1P14065 312 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
PRP18YGR006W NUF2P33895 451 aa2.44□□□□□ -2.02
PRP18YGR006W YBR096WP38256 230 aa2.44□□□□□ -2.02
PRP18YGR006W YGP1P38616 354 aaKnown RBP2.44□□□□□ -2.02
PRP18YGR006W BMT5P40493 336 aa2.44□□□□□ -2.02
PRP18YGR006W PRM10P42946 383 aa2.44□□□□□ -2.02
PRP18YGR006W ALG13P53178 202 aa2.44□□□□□ -2.02
PRP18YGR006W YLR460CP54007 376 aa2.44□□□□□ -2.02
PRP18YGR006W RHO3Q00245 231 aaKnown RBP2.44□□□□□ -2.02
PRP18YGR006W YDC1Q02896 317 aa2.44□□□□□ -2.02
PRP18YGR006W YET3Q07451 203 aa2.44□□□□□ -2.02
PRP18YGR006W DCN1Q12395 269 aa2.44□□□□□ -2.02
PRP18YGR006W SGA1P08019 549 aa2.43□□□□□ -2.02
PRP18YGR006W RPS24AP0CX31 135 aaKnown RBP2.43□□□□□ -2.02
PRP18YGR006W RPS24BP0CX32 135 aaKnown RBP2.43□□□□□ -2.02
PRP18YGR006W SEC22P22214 214 aa2.43□□□□□ -2.02
PRP18YGR006W CDC10P25342 322 aaKnown RBP2.43□□□□□ -2.02
PRP18YGR006W TRR1P29509 319 aaKnown RBP2.43□□□□□ -2.02
PRP18YGR006W SPS18P32572 300 aa2.43□□□□□ -2.02
PRP18YGR006W RCN1P36054 211 aa2.43□□□□□ -2.02
PRP18YGR006W CUE1P38428 203 aa2.43□□□□□ -2.02
PRP18YGR006W MED6P38782 295 aa2.43□□□□□ -2.02
PRP18YGR006W OST2P46964 130 aa2.43□□□□□ -2.02
PRP18YGR006W DSK2P48510 373 aa2.43□□□□□ -2.02
PRP18YGR006W YGL034CP53186 121 aa2.43□□□□□ -2.02
PRP18YGR006W SNO1Q03144 224 aa2.43□□□□□ -2.02
PRP18YGR006W RDS3Q06835 107 aaPredicted RBP2.43□□□□□ -2.02
PRP18YGR006W VPS68Q12016 184 aa2.43□□□□□ -2.02
PRP18YGR006W MDS3P53094 1487 aa2.42□□□□□ -2.02
PRP18YGR006W YLR462WO13556 202 aa2.42□□□□□ -2.02
PRP18YGR006W URA6P15700 204 aa2.42□□□□□ -2.02
PRP18YGR006W COS8P38723 381 aa2.42□□□□□ -2.02
PRP18YGR006W YHL026CP38740 315 aa2.42□□□□□ -2.02
PRP18YGR006W YHR127WP38833 243 aaKnown RBP2.42□□□□□ -2.02
PRP18YGR006W YEL075CP39972 122 aa2.42□□□□□ -2.02
PRP18YGR006W RSM25P40496 264 aa2.42□□□□□ -2.02
PRP18YGR006W MRPL49P40858 161 aaPredicted RBP2.42□□□□□ -2.02
PRP18YGR006W MIC26P50087 233 aa2.42□□□□□ -2.02
PRP18YGR006W SBH2P52871 88 aa2.42□□□□□ -2.02
PRP18YGR006W YGL235WP53071 178 aa2.42□□□□□ -2.02
PRP18YGR006W MMS2P53152 137 aa2.42□□□□□ -2.02
PRP18YGR006W YGR042WP53227 271 aa2.42□□□□□ -2.02
PRP18YGR006W GTR2P53290 341 aa2.42□□□□□ -2.02
PRP18YGR006W YNL140CP53910 189 aa2.42□□□□□ -2.02
PRP18YGR006W RGM1Q00453 211 aa2.42□□□□□ -2.02
PRP18YGR006W SUE1Q06524 206 aa2.42□□□□□ -2.02
PRP18YGR006W HEM25Q07534 307 aa2.42□□□□□ -2.02
PRP18YGR006W YOR186WQ08560 144 aa2.42□□□□□ -2.02
PRP18YGR006W SAS5Q99314 248 aa2.42□□□□□ -2.02
PRP18YGR006W CAF4P36130 643 aa2.41□□□□□ -2.02
PRP18YGR006W DER1P38307 211 aa2.41□□□□□ -2.02
PRP18YGR006W SHG1P38337 142 aa2.41□□□□□ -2.02
PRP18YGR006W GRE3P38715 327 aaKnown RBP RIP-Chip data2.41□□□□□ -2.02not detected
PRP18YGR006W YAP3P38749 330 aa2.41□□□□□ -2.02
PRP18YGR006W VMA22P38784 181 aa2.41□□□□□ -2.02
PRP18YGR006W PRE6P40303 254 aaKnown RBP2.41□□□□□ -2.02
PRP18YGR006W YJR146WP47174 117 aa2.41□□□□□ -2.02
PRP18YGR006W YGL204CP53089 101 aa2.41□□□□□ -2.02
PRP18YGR006W CAB4P53332 305 aa2.41□□□□□ -2.02
PRP18YGR006W LSO2Q3E772 92 aaKnown RBP2.41□□□□□ -2.02
PRP18YGR006W SWI1P09547 1314 aa2.41□□□□□ -2.02
PRP18YGR006W YOR1P53049 1477 aa2.4□□□□□ -2.02
PRP18YGR006W CCA1P21269 546 aa2.4□□□□□ -2.03
PRP18YGR006W SCM4P32564 187 aa2.4□□□□□ -2.03
PRP18YGR006W NTF2P33331 125 aaKnown RBP2.4□□□□□ -2.03
PRP18YGR006W YKL075CP36083 450 aa2.4□□□□□ -2.03
PRP18YGR006W YCR087C-AP37263 153 aa2.4□□□□□ -2.03
PRP18YGR006W NUP57P48837 541 aa2.4□□□□□ -2.03
PRP18YGR006W TRM9P49957 279 aa2.4□□□□□ -2.03
PRP18YGR006W SLM2P53955 656 aa2.4□□□□□ -2.03
PRP18YGR006W RSM10Q03201 203 aa2.4□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 71.2 ms