RNA–Protein interactions for RNA: YER139C

RTR1, Transcript of CTD phosphatase, yeastyeast

Gene RTR1, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTR1YER139C RCN1P36054 211 aa0.94□□□□□ -2.26
RTR1YER139C CAF4P36130 643 aa0.94□□□□□ -2.26
RTR1YER139C SKG1P36169 355 aa0.94□□□□□ -2.26
RTR1YER139C SEC72P39742 193 aaKnown RBP0.94□□□□□ -2.26
RTR1YER139C YER189WP40104 122 aa0.94□□□□□ -2.26
RTR1YER139C ARC15P40518 154 aaRIP-Chip data0.94□□□□□ -2.26not detected
RTR1YER139C IRC18P47056 224 aa0.94□□□□□ -2.26
RTR1YER139C YJL027CP47063 138 aaPredicted RBP0.94□□□□□ -2.26
RTR1YER139C MCM22P47167 239 aa0.94□□□□□ -2.26
RTR1YER139C BXI1P48558 297 aa0.94□□□□□ -2.26
RTR1YER139C MIC26P50087 233 aa0.94□□□□□ -2.26
RTR1YER139C BRR6P53062 197 aa0.94□□□□□ -2.26
RTR1YER139C MRH4P53166 561 aa0.94□□□□□ -2.26
RTR1YER139C ALG13P53178 202 aa0.94□□□□□ -2.26
RTR1YER139C YGR026WP53217 278 aa0.94□□□□□ -2.26
RTR1YER139C YML096WQ04489 525 aa0.94□□□□□ -2.26
RTR1YER139C FAR8Q05040 523 aa0.94□□□□□ -2.26
RTR1YER139C INM2Q05533 292 aa0.94□□□□□ -2.26
RTR1YER139C ABP140Q08641 628 aaKnown RBP0.94□□□□□ -2.26
RTR1YER139C BBP1Q12365 385 aa0.94□□□□□ -2.26
RTR1YER139C DCN1Q12395 269 aa0.94□□□□□ -2.26
RTR1YER139C EMP46Q12396 444 aa0.94□□□□□ -2.26
RTR1YER139C MHT1Q12525 324 aa0.94□□□□□ -2.26
RTR1YER139C HTL1Q9URQ5 78 aa0.94□□□□□ -2.26
RTR1YER139C CHD1P32657 1468 aa0.93□□□□□ -2.26
RTR1YER139C YLR462WO13556 202 aa0.93□□□□□ -2.26
RTR1YER139C RPL25P04456 142 aaKnown RBP0.93□□□□□ -2.26
RTR1YER139C SGA1P08019 549 aa0.93□□□□□ -2.26
RTR1YER139C GCN3P14741 305 aa0.93□□□□□ -2.26
RTR1YER139C ATP7P30902 174 aa0.93□□□□□ -2.26
RTR1YER139C VPS51P36116 164 aa0.93□□□□□ -2.26
RTR1YER139C IKI1P38874 309 aa0.93□□□□□ -2.26
RTR1YER139C AST2P39945 430 aaKnown RBP0.93□□□□□ -2.26
RTR1YER139C YEL075CP39972 122 aa0.93□□□□□ -2.26
RTR1YER139C RMD6P39975 231 aa0.93□□□□□ -2.26
RTR1YER139C FCY21P40039 528 aa0.93□□□□□ -2.26
RTR1YER139C FIS1P40515 155 aa0.93□□□□□ -2.26
RTR1YER139C SNX4P47057 423 aa0.93□□□□□ -2.26
RTR1YER139C HAM1P47119 197 aaKnown RBP0.93□□□□□ -2.26
RTR1YER139C RMR1P53060 241 aa0.93□□□□□ -2.26
RTR1YER139C YGL034CP53186 121 aa0.93□□□□□ -2.26
RTR1YER139C ABF2Q02486 183 aa0.93□□□□□ -2.26
RTR1YER139C YDR248CQ03786 193 aa0.93□□□□□ -2.26
RTR1YER139C SEI1Q06058 285 aa0.93□□□□□ -2.26
RTR1YER139C YET3Q07451 203 aa0.93□□□□□ -2.26
RTR1YER139C YOR186WQ08560 144 aa0.93□□□□□ -2.26
RTR1YER139C YKL183C-AQ3E765 70 aa0.93□□□□□ -2.26
RTR1YER139C LSO2Q3E772 92 aaKnown RBP0.93□□□□□ -2.26
RTR1YER139C YOR020W-AQ3E824 90 aa0.93□□□□□ -2.26
RTR1YER139C SWI1P09547 1314 aa0.92□□□□□ -2.26
RTR1YER139C YDR157WA0A023PZE8 133 aa0.92□□□□□ -2.26
RTR1YER139C CDC28P00546 298 aaKnown RBP0.92□□□□□ -2.26
RTR1YER139C Q0255P03881 472 aa0.92□□□□□ -2.26
RTR1YER139C SPT3P06844 337 aa0.92□□□□□ -2.26
RTR1YER139C YHR032W-AP0C5N6 59 aa0.92□□□□□ -2.26
RTR1YER139C DSF1P0CX08 502 aa0.92□□□□□ -2.26
RTR1YER139C YNR073CP0CX09 502 aa0.92□□□□□ -2.26
RTR1YER139C SNA3P14359 133 aa0.92□□□□□ -2.26
RTR1YER139C FBA1P14540 359 aaKnown RBP0.92□□□□□ -2.26
RTR1YER139C FCY2P17064 533 aa0.92□□□□□ -2.26
RTR1YER139C RPO26P20435 155 aa0.92□□□□□ -2.26
RTR1YER139C DBF2P22204 572 aa0.92□□□□□ -2.26
RTR1YER139C SEC22P22214 214 aa0.92□□□□□ -2.26
RTR1YER139C TRX3P25372 127 aa0.92□□□□□ -2.26
RTR1YER139C ERG24P32462 438 aaKnown RBP0.92□□□□□ -2.26
RTR1YER139C SPS18P32572 300 aa0.92□□□□□ -2.26
RTR1YER139C PTM1P32857 523 aa0.92□□□□□ -2.26
RTR1YER139C NTF2P33331 125 aaKnown RBP0.92□□□□□ -2.26
RTR1YER139C YBR096WP38256 230 aa0.92□□□□□ -2.26
RTR1YER139C DOG2P38773 246 aa0.92□□□□□ -2.26
RTR1YER139C DOG1P38774 246 aa0.92□□□□□ -2.26
RTR1YER139C RTC3P38804 111 aaPredicted RBP0.92□□□□□ -2.26
RTR1YER139C YAR068WP39564 161 aa0.92□□□□□ -2.26
RTR1YER139C YER034WP40022 185 aaKnown RBP0.92□□□□□ -2.26
RTR1YER139C BMT5P40493 336 aa0.92□□□□□ -2.26
RTR1YER139C RSM25P40496 264 aa0.92□□□□□ -2.26
RTR1YER139C CAT5P41735 233 aa0.92□□□□□ -2.26
RTR1YER139C YFR054CP43622 192 aa0.92□□□□□ -2.26
RTR1YER139C YJR056CP47115 236 aa0.92□□□□□ -2.26
RTR1YER139C CWC23P52868 283 aaPredicted RBP0.92□□□□□ -2.26
RTR1YER139C MMS2P53152 137 aa0.92□□□□□ -2.26
RTR1YER139C PRM8P53174 237 aa0.92□□□□□ -2.26
RTR1YER139C PDR17P53844 350 aa0.92□□□□□ -2.26
RTR1YER139C RSM10Q03201 203 aa0.92□□□□□ -2.26
RTR1YER139C ATG39Q06159 398 aa0.92□□□□□ -2.26
RTR1YER139C YLR036CQ07986 203 aa0.92□□□□□ -2.26
RTR1YER139C TPO4Q12256 659 aa0.92□□□□□ -2.26
RTR1YER139C YPR170W-BP0C5R9 85 aa0.91□□□□□ -2.26
RTR1YER139C RAD51P25454 400 aa0.91□□□□□ -2.26
RTR1YER139C ATG22P25568 528 aa0.91□□□□□ -2.26
RTR1YER139C RFA3P26755 122 aaKnown RBP0.91□□□□□ -2.26
RTR1YER139C ASF2P32448 525 aaPredicted RBP0.91□□□□□ -2.26
RTR1YER139C YKL075CP36083 450 aa0.91□□□□□ -2.26
RTR1YER139C MSA2P36157 363 aa0.91□□□□□ -2.26
RTR1YER139C YCR087C-AP37263 153 aa0.91□□□□□ -2.26
RTR1YER139C YBR063CP38083 404 aa0.91□□□□□ -2.26
RTR1YER139C URA8P38627 578 aaPredicted RBP0.91□□□□□ -2.26
RTR1YER139C EGD2P38879 174 aaKnown RBP0.91□□□□□ -2.26
RTR1YER139C SRP14P38985 146 aa0.91□□□□□ -2.26
RTR1YER139C AIM2P39721 246 aa0.91□□□□□ -2.26
Retrieved 100 of 5,963 RNA–protein pairs in 21.4 ms