RNA–Protein interactions for RNA: YER049W

TPA1, Transcript of Poly(rA)-binding protein, yeastyeast

Gene TPA1, Length 1,935 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPA1YER049W VAM3Q12241 283 aa3.64□□□□□ -1.83
TPA1YER049W YDR262WQ12331 272 aa3.64□□□□□ -1.83
TPA1YER049W MEX67Q99257 599 aaKnown RBP3.64□□□□□ -1.83
TPA1YER049W SEC59P20048 519 aa3.63□□□□□ -1.83
TPA1YER049W RPB8P20436 146 aa3.63□□□□□ -1.83
TPA1YER049W PPH21P23594 369 aa3.63□□□□□ -1.83
TPA1YER049W MIR1P23641 311 aaKnown RBP3.63□□□□□ -1.83
TPA1YER049W POF1P25576 258 aa3.63□□□□□ -1.83
TPA1YER049W MRPL4P36517 319 aa3.63□□□□□ -1.83
TPA1YER049W YBR013CP38215 129 aa3.63□□□□□ -1.83
TPA1YER049W UMP1P38293 148 aa3.63□□□□□ -1.83
TPA1YER049W RRP3P38712 501 aaKnown RBP3.63□□□□□ -1.83
TPA1YER049W LYS1P38998 373 aaRIP-Chip data3.63□□□□□ -1.83not detected
TPA1YER049W ERJ5P43613 295 aaPredicted RBP3.63□□□□□ -1.83
TPA1YER049W YJL016WP47072 561 aa3.63□□□□□ -1.83
TPA1YER049W PKP2P53170 491 aa3.63□□□□□ -1.83
TPA1YER049W ERV14P53173 138 aa3.63□□□□□ -1.83
TPA1YER049W PDR16P53860 351 aaKnown RBP3.63□□□□□ -1.83
TPA1YER049W OCA2P53949 197 aa3.63□□□□□ -1.83
TPA1YER049W ACS1Q01574 713 aa3.63□□□□□ -1.83
TPA1YER049W EGD1Q02642 157 aaKnown RBP3.63□□□□□ -1.83
TPA1YER049W ARR3Q06598 404 aa3.63□□□□□ -1.83
TPA1YER049W PML1Q07930 204 aaPredicted RBP3.63□□□□□ -1.83
TPA1YER049W IZH3Q07959 543 aa3.63□□□□□ -1.83
TPA1YER049W YOL073CQ08232 322 aa3.63□□□□□ -1.83
TPA1YER049W YCT1Q12235 531 aa3.63□□□□□ -1.83
TPA1YER049W MED4Q12343 284 aa3.63□□□□□ -1.83
TPA1YER049W CPR2P23285 205 aa3.62□□□□□ -1.83
TPA1YER049W PTP1P25044 335 aa3.62□□□□□ -1.83
TPA1YER049W ERG3P32353 365 aa3.62□□□□□ -1.83
TPA1YER049W AGA2P32781 87 aa3.62□□□□□ -1.83
TPA1YER049W NTF2P33331 125 aaKnown RBP3.62□□□□□ -1.83
TPA1YER049W PRS2P38620 318 aaKnown RBP3.62□□□□□ -1.83
TPA1YER049W YEA4P40004 342 aa3.62□□□□□ -1.83
TPA1YER049W SLM1P40485 686 aa3.62□□□□□ -1.83
TPA1YER049W XBP1P40489 647 aa3.62□□□□□ -1.83
TPA1YER049W TAX4P47030 604 aa3.62□□□□□ -1.83
TPA1YER049W YIF1P53845 314 aaKnown RBP3.62□□□□□ -1.83
TPA1YER049W ALG9P53868 555 aaKnown RBP3.62□□□□□ -1.83
TPA1YER049W RSM10Q03201 203 aa3.62□□□□□ -1.83
TPA1YER049W THI74Q04083 370 aa3.62□□□□□ -1.83
TPA1YER049W BNA5Q05979 453 aa3.62□□□□□ -1.83
TPA1YER049W CTR3Q06686 241 aa3.62□□□□□ -1.83
TPA1YER049W YPL272CQ08984 517 aa3.62□□□□□ -1.83
TPA1YER049W SRL2Q12020 392 aa3.62□□□□□ -1.83
TPA1YER049W USV1Q12132 391 aa3.62□□□□□ -1.83
TPA1YER049W YOR343CQ12484 108 aa3.62□□□□□ -1.83
TPA1YER049W SGA1P08019 549 aa3.62□□□□□ -1.83
TPA1YER049W STE18P18852 110 aa3.62□□□□□ -1.83
TPA1YER049W RFA3P26755 122 aaKnown RBP3.62□□□□□ -1.83
TPA1YER049W PPA2P28239 310 aa3.62□□□□□ -1.83
TPA1YER049W SSS1P35179 80 aa3.62□□□□□ -1.83
TPA1YER049W LSM4P40070 187 aaKnown RBP3.62□□□□□ -1.83
TPA1YER049W AIM24P47127 394 aa3.62□□□□□ -1.83
TPA1YER049W COQ5P49017 307 aa3.62□□□□□ -1.83
TPA1YER049W MPA43P53583 542 aaPredicted RBP3.62□□□□□ -1.83
TPA1YER049W BSC5P53755 489 aa3.62□□□□□ -1.83
TPA1YER049W SAM50P53969 484 aa3.62□□□□□ -1.83
TPA1YER049W ERG13P54839 491 aaKnown RBP3.62□□□□□ -1.83
TPA1YER049W PET191Q02772 108 aa3.62□□□□□ -1.83
TPA1YER049W ADD37Q03233 198 aa3.62□□□□□ -1.83
TPA1YER049W YDR415CQ04033 374 aaPredicted RBP3.62□□□□□ -1.83
TPA1YER049W YPR174CQ06616 221 aaPredicted RBP3.62□□□□□ -1.83
TPA1YER049W TGS1Q12052 315 aa3.62□□□□□ -1.83
TPA1YER049W DCN1Q12395 269 aa3.62□□□□□ -1.83
TPA1YER049W CYR1P08678 2026 aaKnown RBP3.61□□□□□ -1.83
TPA1YER049W RPL1AP0CX43 217 aaKnown RBP3.61□□□□□ -1.83
TPA1YER049W RPL1BP0CX44 217 aaKnown RBP3.61□□□□□ -1.83
TPA1YER049W MEK1P24719 497 aaPredicted RBP3.61□□□□□ -1.83
TPA1YER049W STP22P25604 385 aa3.61□□□□□ -1.83
TPA1YER049W LAC1P28496 418 aa3.61□□□□□ -1.83
TPA1YER049W SCM4P32564 187 aa3.61□□□□□ -1.83
TPA1YER049W ELF1P36053 145 aa3.61□□□□□ -1.83
TPA1YER049W FRM2P37261 193 aa3.61□□□□□ -1.83
TPA1YER049W RIB5P38145 238 aa3.61□□□□□ -1.83
TPA1YER049W TRS20P38334 175 aa3.61□□□□□ -1.83
TPA1YER049W YNL208WP40159 199 aaKnown RBP3.61□□□□□ -1.83
TPA1YER049W PHS1P40857 217 aa3.61□□□□□ -1.83
TPA1YER049W YJR141WP47172 347 aaPredicted RBP3.61□□□□□ -1.83
TPA1YER049W BNS1P50084 137 aa3.61□□□□□ -1.83
TPA1YER049W MGA1P53050 456 aa3.61□□□□□ -1.83
TPA1YER049W YGL185CP53100 379 aa3.61□□□□□ -1.83
TPA1YER049W RHO5P53879 331 aaKnown RBP3.61□□□□□ -1.83
TPA1YER049W EKI1Q03764 534 aa3.61□□□□□ -1.83
TPA1YER049W HOF1Q05080 669 aa3.61□□□□□ -1.83
TPA1YER049W MCH4Q08268 501 aa3.61□□□□□ -1.83
TPA1YER049W CET1O13297 549 aaPredicted RBP3.6□□□□□ -1.83
TPA1YER049W POP5P28005 173 aa3.6□□□□□ -1.83
TPA1YER049W FAA1P30624 700 aaKnown RBP3.6□□□□□ -1.83
TPA1YER049W YNK1P36010 153 aaKnown RBP3.6□□□□□ -1.83
TPA1YER049W MRPS9P38120 278 aa3.6□□□□□ -1.83
TPA1YER049W YBR292CP38357 123 aa3.6□□□□□ -1.83
TPA1YER049W YHR180WP38868 163 aa3.6□□□□□ -1.83
TPA1YER049W SUR2P38992 349 aa3.6□□□□□ -1.83
TPA1YER049W FLX1P40464 311 aa3.6□□□□□ -1.83
TPA1YER049W YAP1802P53309 568 aa3.6□□□□□ -1.83
TPA1YER049W RNH201P53942 307 aa3.6□□□□□ -1.83
TPA1YER049W CUE4Q04201 117 aaPredicted RBP3.6□□□□□ -1.83
TPA1YER049W YMR082CQ04276 118 aa3.6□□□□□ -1.83
TPA1YER049W AVO2Q04749 426 aa3.6□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms