RNA–Protein interactions for RNA: YDR379C-A

SDH6, Transcript of Mitochondrial protein involved in assembly of succinate dehydrogenase, yeastyeast

Gene SDH6, Length 240 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SDH6YDR379C-A PSF1Q12488 208 aa-0.27□□□□□ -2.45
SDH6YDR379C-A IPP1P00817 287 aaKnown RBP-0.28□□□□□ -2.45
SDH6YDR379C-A CDC36P06100 191 aaPredicted RBP-0.28□□□□□ -2.45
SDH6YDR379C-A GCD2P12754 651 aaPredicted RBP-0.28□□□□□ -2.45
SDH6YDR379C-A FCY2P17064 533 aa-0.28□□□□□ -2.45
SDH6YDR379C-A MRPS28P21771 286 aa-0.28□□□□□ -2.45
SDH6YDR379C-A VPS3P23643 1011 aa-0.28□□□□□ -2.45
SDH6YDR379C-A BLI1P35727 113 aa-0.28□□□□□ -2.45
SDH6YDR379C-A YBR063CP38083 404 aa-0.28□□□□□ -2.45
SDH6YDR379C-A UMP1P38293 148 aa-0.28□□□□□ -2.45
SDH6YDR379C-A DDI1P40087 428 aa-0.28□□□□□ -2.45
SDH6YDR379C-A YIL102CP40488 101 aa-0.28□□□□□ -2.45
SDH6YDR379C-A HYR1P40581 163 aaKnown RBP-0.28□□□□□ -2.45
SDH6YDR379C-A SNZ3P43545 298 aa-0.28□□□□□ -2.45
SDH6YDR379C-A YFH7P43591 353 aa-0.28□□□□□ -2.45
SDH6YDR379C-A SPG4Q04438 115 aa-0.28□□□□□ -2.45
SDH6YDR379C-A MGR3Q04472 501 aa-0.28□□□□□ -2.45
SDH6YDR379C-A YMR252CQ04814 134 aa-0.28□□□□□ -2.45
SDH6YDR379C-A YSR3P23501 404 aa-0.29□□□□□ -2.46
SDH6YDR379C-A QRI5P32344 111 aa-0.29□□□□□ -2.46
SDH6YDR379C-A SNC2P33328 115 aa-0.29□□□□□ -2.46
SDH6YDR379C-A MRX5P47007 382 aa-0.29□□□□□ -2.46
SDH6YDR379C-A YNL046WP53956 172 aa-0.29□□□□□ -2.46
SDH6YDR379C-A SPO19Q03029 223 aa-0.29□□□□□ -2.46
SDH6YDR379C-A SSQ1Q05931 657 aaPredicted RBP-0.29□□□□□ -2.46
SDH6YDR379C-A FSF1Q12029 327 aaKnown RBP-0.29□□□□□ -2.46
SDH6YDR379C-A ERP4Q12450 207 aa-0.29□□□□□ -2.46
SDH6YDR379C-A ATG40Q99325 256 aa-0.29□□□□□ -2.46
SDH6YDR379C-A YLR236CA0A023PZG4 107 aa-0.3□□□□□ -2.46
SDH6YDR379C-A MDM35O60200 86 aa-0.3□□□□□ -2.46
SDH6YDR379C-A HIS1P00498 297 aaKnown RBP-0.3□□□□□ -2.46
SDH6YDR379C-A REP2P03872 296 aa-0.3□□□□□ -2.46
SDH6YDR379C-A SEC11P15367 167 aa-0.3□□□□□ -2.46
SDH6YDR379C-A MET16P18408 261 aaPredicted RBP-0.3□□□□□ -2.46
SDH6YDR379C-A YCL042WP25572 119 aa-0.3□□□□□ -2.46
SDH6YDR379C-A RPT5P33297 434 aaKnown RBP-0.3□□□□□ -2.46
SDH6YDR379C-A SHE2P36068 246 aaKnown RBP RIP-Chip data-0.3□□□□□ -2.46not detected
SDH6YDR379C-A MRPL15P36523 253 aa-0.3□□□□□ -2.46
SDH6YDR379C-A MRPL40P36534 297 aa-0.3□□□□□ -2.46
SDH6YDR379C-A GOS1P38736 223 aa-0.3□□□□□ -2.46
SDH6YDR379C-A FMP33P46998 180 aa-0.3□□□□□ -2.46
SDH6YDR379C-A ILM1P47155 203 aa-0.3□□□□□ -2.46
SDH6YDR379C-A YLR460CP54007 376 aa-0.3□□□□□ -2.46
SDH6YDR379C-A PRO2P54885 456 aaKnown RBP-0.3□□□□□ -2.46
SDH6YDR379C-A ABF2Q02486 183 aa-0.3□□□□□ -2.46
SDH6YDR379C-A ERV41Q04651 352 aa-0.3□□□□□ -2.46
SDH6YDR379C-A CCW12Q12127 133 aa-0.3□□□□□ -2.46
SDH6YDR379C-A TUS1Q06412 1307 aa-0.31□□□□□ -2.46
SDH6YDR379C-A SIR2P06700 562 aa-0.31□□□□□ -2.46
SDH6YDR379C-A ERD2P18414 219 aa-0.31□□□□□ -2.46
SDH6YDR379C-A YEL008WP40001 126 aa-0.31□□□□□ -2.46
SDH6YDR379C-A COA1P40452 197 aa-0.31□□□□□ -2.46
SDH6YDR379C-A CAT5P41735 233 aa-0.31□□□□□ -2.46
SDH6YDR379C-A SNZ2P53824 298 aa-0.31□□□□□ -2.46
SDH6YDR379C-A YNL010WP53981 241 aaKnown RBP-0.31□□□□□ -2.46
SDH6YDR379C-A YDR391CQ04170 232 aa-0.31□□□□□ -2.46
SDH6YDR379C-A CUE4Q04201 117 aaPredicted RBP-0.31□□□□□ -2.46
SDH6YDR379C-A YML096WQ04489 525 aa-0.31□□□□□ -2.46
SDH6YDR379C-A YPR098CQ06089 161 aa-0.31□□□□□ -2.46
SDH6YDR379C-A YPR203WQ08994 102 aa-0.31□□□□□ -2.46
SDH6YDR379C-A GPM2Q12008 311 aa-0.31□□□□□ -2.46
SDH6YDR379C-A RAD28Q12021 506 aa-0.31□□□□□ -2.46
SDH6YDR379C-A COA3Q3E7B2 85 aa-0.31□□□□□ -2.46
SDH6YDR379C-A FAS1P07149 2051 aaKnown RBP-0.31□□□□□ -2.46
SDH6YDR379C-A DBF2P22204 572 aa-0.32□□□□□ -2.46
SDH6YDR379C-A MEK1P24719 497 aaPredicted RBP-0.32□□□□□ -2.46
SDH6YDR379C-A RPS5P26783 225 aaKnown RBP-0.32□□□□□ -2.46
SDH6YDR379C-A UBC8P28263 218 aa-0.32□□□□□ -2.46
SDH6YDR379C-A HOM6P31116 359 aaKnown RBP-0.32□□□□□ -2.46
SDH6YDR379C-A SGE1P33335 543 aa-0.32□□□□□ -2.46
SDH6YDR379C-A MRPL17P36528 281 aa-0.32□□□□□ -2.46
SDH6YDR379C-A YBR096WP38256 230 aa-0.32□□□□□ -2.46
SDH6YDR379C-A VMA22P38784 181 aa-0.32□□□□□ -2.46
SDH6YDR379C-A SMB1P40018 196 aaKnown RBP-0.32□□□□□ -2.46
SDH6YDR379C-A YER034WP40022 185 aaKnown RBP-0.32□□□□□ -2.46
SDH6YDR379C-A DID2P69771 204 aa-0.32□□□□□ -2.46
SDH6YDR379C-A SWP1Q02795 286 aa-0.32□□□□□ -2.46
SDH6YDR379C-A YDR248CQ03786 193 aa-0.32□□□□□ -2.46
SDH6YDR379C-A GMC2Q06201 188 aa-0.32□□□□□ -2.46
SDH6YDR379C-A YRA1Q12159 226 aaKnown RBP-0.32□□□□□ -2.46
SDH6YDR379C-A TSC3Q3E790 80 aa-0.32□□□□□ -2.46
SDH6YDR379C-A YPL229WQ99395 206 aa-0.32□□□□□ -2.46
SDH6YDR379C-A PRS2P38620 318 aaKnown RBP-0.33□□□□□ -2.46
SDH6YDR379C-A YHL037CP38733 133 aa-0.33□□□□□ -2.46
SDH6YDR379C-A YAR064WP39563 99 aa-0.33□□□□□ -2.46
SDH6YDR379C-A HPA3P39979 161 aa-0.33□□□□□ -2.46
SDH6YDR379C-A IRC22P40006 225 aa-0.33□□□□□ -2.46
SDH6YDR379C-A PRE6P40303 254 aaKnown RBP-0.33□□□□□ -2.46
SDH6YDR379C-A GCD14P46959 383 aaPredicted RBP-0.33□□□□□ -2.46
SDH6YDR379C-A EAF6P47128 113 aa-0.33□□□□□ -2.46
SDH6YDR379C-A PNC1P53184 216 aaKnown RBP-0.33□□□□□ -2.46
SDH6YDR379C-A OST6Q03723 332 aa-0.33□□□□□ -2.46
SDH6YDR379C-A YPR170W-BP0C5R9 85 aa-0.34□□□□□ -2.46
SDH6YDR379C-A YLR156WP0CE96 114 aa-0.34□□□□□ -2.46
SDH6YDR379C-A YLR159WP0CE97 114 aa-0.34□□□□□ -2.46
SDH6YDR379C-A YLR161WP0CE98 114 aa-0.34□□□□□ -2.46
SDH6YDR379C-A YBR285WP38354 144 aa-0.34□□□□□ -2.46
SDH6YDR379C-A URA8P38627 578 aaPredicted RBP-0.34□□□□□ -2.46
SDH6YDR379C-A GVP36P40531 326 aaKnown RBP-0.34□□□□□ -2.46
SDH6YDR379C-A YJR111CP47148 283 aaKnown RBP-0.34□□□□□ -2.46
Retrieved 100 of 5,963 RNA–protein pairs in 37 ms