RNA–Protein interactions for RNA: YDR243C

PRP28, Transcript of RNA helicase in the DEAD-box family, yeastyeast

Gene PRP28, Length 1,767 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP28YDR243C TY2A-FP0CX61 438 aa4.02□□□□□ -1.77
PRP28YDR243C TY2A-GR2P0CX62 438 aa4.02□□□□□ -1.77
PRP28YDR243C SAM35P14693 329 aa4.02□□□□□ -1.77
PRP28YDR243C HSP26P15992 214 aaKnown RBP RIP-Chip data4.02□□□□□ -1.77not detected
PRP28YDR243C PCL1P24867 279 aa4.02□□□□□ -1.77
PRP28YDR243C POP5P28005 173 aa4.02□□□□□ -1.77
PRP28YDR243C YKL070WP36087 169 aa4.02□□□□□ -1.77
PRP28YDR243C YHR130CP38834 111 aa4.02□□□□□ -1.77
PRP28YDR243C ARO9P38840 513 aaPredicted RBP4.02□□□□□ -1.77
PRP28YDR243C YAL037WP39728 267 aa4.02□□□□□ -1.77
PRP28YDR243C OXA1P39952 402 aa4.02□□□□□ -1.77
PRP28YDR243C SMD3P43321 101 aaKnown RBP4.02□□□□□ -1.77
PRP28YDR243C ERJ5P43613 295 aaPredicted RBP4.02□□□□□ -1.77
PRP28YDR243C ERG25P53045 309 aa4.02□□□□□ -1.77
PRP28YDR243C NPY1P53164 384 aa4.02□□□□□ -1.77
PRP28YDR243C PNC1P53184 216 aaKnown RBP4.02□□□□□ -1.77
PRP28YDR243C YIF1P53845 314 aaKnown RBP4.02□□□□□ -1.77
PRP28YDR243C TPS1Q00764 495 aaKnown RBP4.02□□□□□ -1.77
PRP28YDR243C UBC7Q02159 165 aa4.02□□□□□ -1.77
PRP28YDR243C LOA1Q06508 300 aa4.02□□□□□ -1.77
PRP28YDR243C RDR1Q08904 546 aa4.02□□□□□ -1.77
PRP28YDR243C LAS17Q12446 633 aa4.02□□□□□ -1.77
PRP28YDR243C DET1Q99288 334 aaKnown RBP4.02□□□□□ -1.77
PRP28YDR243C RAS2P01120 322 aaKnown RBP4.01□□□□□ -1.77
PRP28YDR243C CYC3P06182 269 aa4.01□□□□□ -1.77
PRP28YDR243C SIR2P06700 562 aa4.01□□□□□ -1.77
PRP28YDR243C URA10P30402 227 aa4.01□□□□□ -1.77
PRP28YDR243C CDC5P32562 705 aa4.01□□□□□ -1.77
PRP28YDR243C YKL071WP36086 256 aa4.01□□□□□ -1.77
PRP28YDR243C ADH5P38113 351 aaKnown RBP4.01□□□□□ -1.77
PRP28YDR243C HTD2P38790 280 aaKnown RBP4.01□□□□□ -1.77
PRP28YDR243C TAT2P38967 592 aa4.01□□□□□ -1.77
PRP28YDR243C GAA1P39012 614 aa4.01□□□□□ -1.77
PRP28YDR243C PAC2P39937 518 aa4.01□□□□□ -1.77
PRP28YDR243C RPL13BP40212 199 aaKnown RBP4.01□□□□□ -1.77
PRP28YDR243C HIT1P46973 164 aa4.01□□□□□ -1.77
PRP28YDR243C BIT61P47041 543 aa4.01□□□□□ -1.77
PRP28YDR243C RCR2Q03446 210 aaKnown RBP4.01□□□□□ -1.77
PRP28YDR243C BNA5Q05979 453 aa4.01□□□□□ -1.77
PRP28YDR243C YTH1Q06102 208 aaPredicted RBP4.01□□□□□ -1.77
PRP28YDR243C DIC1Q06143 298 aa4.01□□□□□ -1.77
PRP28YDR243C POS5Q06892 414 aa4.01□□□□□ -1.77
PRP28YDR243C ATG41Q12048 136 aa4.01□□□□□ -1.77
PRP28YDR243C IZH4Q99393 312 aa4.01□□□□□ -1.77
PRP28YDR243C RPL40AP0CH08 128 aaKnown RBP4□□□□□ -1.77
PRP28YDR243C RPL40BP0CH09 128 aaKnown RBP4□□□□□ -1.77
PRP28YDR243C NFS1P25374 497 aa4□□□□□ -1.77
PRP28YDR243C DCG1P32460 244 aa4□□□□□ -1.77
PRP28YDR243C PUB1P32588 453 aaKnown RBP RIP-Chip data4□□□□□ -1.77not detected
PRP28YDR243C YKU70P32807 602 aa4□□□□□ -1.77
PRP28YDR243C ASC1P38011 319 aaKnown RBP4□□□□□ -1.77
PRP28YDR243C REG2P38232 338 aa4□□□□□ -1.77
PRP28YDR243C BAT1P38891 393 aaKnown RBP4□□□□□ -1.77
PRP28YDR243C RPS26AP39938 119 aaKnown RBP4□□□□□ -1.77
PRP28YDR243C RPS26BP39939 119 aaKnown RBP4□□□□□ -1.77
PRP28YDR243C NSA2P40078 261 aaKnown RBP4□□□□□ -1.77
PRP28YDR243C PRM5P40476 318 aa4□□□□□ -1.77
PRP28YDR243C BNS1P50084 137 aa4□□□□□ -1.77
PRP28YDR243C TYW3P53177 273 aa4□□□□□ -1.77
PRP28YDR243C YGR015CP53208 328 aa4□□□□□ -1.77
PRP28YDR243C COX18P53239 316 aa4□□□□□ -1.77
PRP28YDR243C VHT1P53241 593 aa4□□□□□ -1.77
PRP28YDR243C OGG1P53397 376 aaPredicted RBP4□□□□□ -1.77
PRP28YDR243C SMM1P53720 384 aaKnown RBP4□□□□□ -1.77
PRP28YDR243C SUR7P54003 302 aa4□□□□□ -1.77
PRP28YDR243C YLR460CP54007 376 aa4□□□□□ -1.77
PRP28YDR243C LSM3P57743 89 aaKnown RBP4□□□□□ -1.77
PRP28YDR243C SEI1Q06058 285 aa4□□□□□ -1.77
PRP28YDR243C NOC4Q06512 552 aaPredicted RBP4□□□□□ -1.77
PRP28YDR243C LDS2Q08218 356 aa4□□□□□ -1.77
PRP28YDR243C USB1Q12208 290 aaKnown RBP4□□□□□ -1.77
PRP28YDR243C YOL114CQ12322 202 aa4□□□□□ -1.77
PRP28YDR243C FRE7Q12333 620 aa4□□□□□ -1.77
PRP28YDR243C SWM1Q12379 170 aa4□□□□□ -1.77
PRP28YDR243C YJR112W-AQ3E743 109 aa4□□□□□ -1.77
PRP28YDR243C YKL018C-AQ3E7A7 99 aa4□□□□□ -1.77
PRP28YDR243C FKS3Q04952 1785 aa4□□□□□ -1.77
PRP28YDR243C RIF1P29539 1916 aa4□□□□□ -1.77
PRP28YDR243C TY2A-LR1P0C2J4 438 aa3.99□□□□□ -1.77
PRP28YDR243C TY2A-CP25383 438 aa3.99□□□□□ -1.77
PRP28YDR243C PRP18P33411 251 aaPredicted RBP3.99□□□□□ -1.77
PRP28YDR243C GCS1P35197 352 aa3.99□□□□□ -1.77
PRP28YDR243C NNK1P36003 928 aa3.99□□□□□ -1.77
PRP28YDR243C EMC3P36039 253 aa3.99□□□□□ -1.77
PRP28YDR243C RPL14BP38754 138 aaKnown RBP3.99□□□□□ -1.77
PRP28YDR243C ACA1P39970 489 aa3.99□□□□□ -1.77
PRP28YDR243C IRC22P40006 225 aa3.99□□□□□ -1.77
PRP28YDR243C YPS6P40583 537 aa3.99□□□□□ -1.77
PRP28YDR243C BNA2P47125 453 aa3.99□□□□□ -1.77
PRP28YDR243C YGR283CP53336 341 aaPredicted RBP3.99□□□□□ -1.77
PRP28YDR243C APJ1P53940 528 aa3.99□□□□□ -1.77
PRP28YDR243C TY2A-DR2Q03483 438 aa3.99□□□□□ -1.77
PRP28YDR243C MRX8Q05473 314 aa3.99□□□□□ -1.77
PRP28YDR243C PLB3Q08108 686 aa3.99□□□□□ -1.77
PRP28YDR243C YDL157CQ12082 118 aa3.99□□□□□ -1.77
PRP28YDR243C PER33Q12144 273 aa3.99□□□□□ -1.77
PRP28YDR243C TY2A-BQ12260 438 aa3.99□□□□□ -1.77
PRP28YDR243C TY2A-OR2Q12293 438 aa3.99□□□□□ -1.77
PRP28YDR243C TY2A-DR1Q12392 438 aa3.99□□□□□ -1.77
PRP28YDR243C TY2A-OR1Q12439 438 aa3.99□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms