RNA–Protein interactions for RNA: YDR194C

MSS116, Transcript of Mitochondrial transcription elongation factor, yeast

Gene MSS116, Length 1,995 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSS116	YDR194C	YHR214C-E	Q8TGK0	99 aa		4.6	□□□□□ -1.67
MSS116	YDR194C	IPP1	P00817	287 aa	Known RBP	4.6	□□□□□ -1.67
MSS116	YDR194C	GPI18	P38211	433 aa		4.6	□□□□□ -1.67
MSS116	YDR194C	POP7	P38291	140 aa		4.6	□□□□□ -1.67
MSS116	YDR194C	YOL085C	Q99345	113 aa		4.6	□□□□□ -1.67
MSS116	YDR194C	COX4	P04037	155 aa		4.59	□□□□□ -1.67
MSS116	YDR194C	MRPL27	P36526	146 aa	Predicted RBP	4.59	□□□□□ -1.67
MSS116	YDR194C	DOG1	P38774	246 aa		4.59	□□□□□ -1.67
MSS116	YDR194C	EDC3	P39998	551 aa	Known RBP	4.59	□□□□□ -1.67
MSS116	YDR194C	YIL054W	P40524	105 aa		4.59	□□□□□ -1.67
MSS116	YDR194C	SBH2	P52871	88 aa		4.59	□□□□□ -1.67
MSS116	YDR194C	EMP46	Q12396	444 aa		4.59	□□□□□ -1.67
MSS116	YDR194C	LSO2	Q3E772	92 aa	Known RBP	4.59	□□□□□ -1.67
MSS116	YDR194C	RPS28B	P0C0X0	67 aa	Known RBP	4.58	□□□□□ -1.68
MSS116	YDR194C	YHL044W	P38727	235 aa		4.58	□□□□□ -1.68
MSS116	YDR194C	ICE2	P40499	491 aa		4.58	□□□□□ -1.68
MSS116	YDR194C	YFH7	P43591	353 aa		4.58	□□□□□ -1.68
MSS116	YDR194C	OSH6	Q02201	448 aa		4.58	□□□□□ -1.68
MSS116	YDR194C	RPS28A	Q3E7X9	67 aa	Predicted RBP	4.58	□□□□□ -1.68
MSS116	YDR194C	PTM1	P32857	523 aa		4.58	□□□□□ -1.68
MSS116	YDR194C	YGR050C	P53231	118 aa		4.58	□□□□□ -1.68
MSS116	YDR194C	DID2	P69771	204 aa		4.58	□□□□□ -1.68
MSS116	YDR194C	SPC2	Q04969	178 aa		4.58	□□□□□ -1.68
MSS116	YDR194C	YLR053C	Q12026	108 aa		4.58	□□□□□ -1.68
MSS116	YDR194C	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.58	□□□□□ -1.68
MSS116	YDR194C	TAD3	Q9URQ3	322 aa		4.58	□□□□□ -1.68
MSS116	YDR194C	YCR090C	P25654	182 aa	Known RBP	4.57	□□□□□ -1.68
MSS116	YDR194C	BMH1	P29311	267 aa	Known RBP	4.57	□□□□□ -1.68
MSS116	YDR194C	SPL2	P38839	148 aa		4.57	□□□□□ -1.68
MSS116	YDR194C	YGL260W	P53056	76 aa		4.57	□□□□□ -1.68
MSS116	YDR194C	NQM1	P53228	333 aa	Predicted RBP	4.57	□□□□□ -1.68
MSS116	YDR194C	RPL25	P04456	142 aa	Known RBP	4.56	□□□□□ -1.68
MSS116	YDR194C	CDC7	P06243	507 aa		4.56	□□□□□ -1.68
MSS116	YDR194C	ISY1	P21374	235 aa	Predicted RBP	4.56	□□□□□ -1.68
MSS116	YDR194C	COX10	P21592	462 aa		4.56	□□□□□ -1.68
MSS116	YDR194C	SEC22	P22214	214 aa		4.56	□□□□□ -1.68
MSS116	YDR194C	NVJ1	P38881	321 aa		4.56	□□□□□ -1.68
MSS116	YDR194C	FLC3	P53121	802 aa		4.56	□□□□□ -1.68
MSS116	YDR194C	YML108W	Q03759	105 aa		4.56	□□□□□ -1.68
MSS116	YDR194C	TVP15	Q03860	143 aa		4.56	□□□□□ -1.68
MSS116	YDR194C	YLR030W	Q07967	263 aa		4.56	□□□□□ -1.68
MSS116	YDR194C	RDI1	Q12434	202 aa		4.56	□□□□□ -1.68
MSS116	YDR194C	LSM4	P40070	187 aa	Known RBP	4.56	□□□□□ -1.68
MSS116	YDR194C	COQ5	P49017	307 aa		4.56	□□□□□ -1.68
MSS116	YDR194C	CAX4	P53223	239 aa		4.56	□□□□□ -1.68
MSS116	YDR194C	YOL019W	Q08157	551 aa		4.56	□□□□□ -1.68
MSS116	YDR194C	YDL211C	Q12121	372 aa		4.56	□□□□□ -1.68
MSS116	YDR194C	SMT3	Q12306	101 aa	Known RBP	4.56	□□□□□ -1.68
MSS116	YDR194C	YPL247C	Q12523	523 aa		4.56	□□□□□ -1.68
MSS116	YDR194C	HTL1	Q9URQ5	78 aa		4.56	□□□□□ -1.68
MSS116	YDR194C	MSA2	P36157	363 aa		4.55	□□□□□ -1.68
MSS116	YDR194C	DOG2	P38773	246 aa		4.55	□□□□□ -1.68
MSS116	YDR194C	TEM1	P38987	245 aa		4.55	□□□□□ -1.68
MSS116	YDR194C	RPA43	P46669	326 aa		4.55	□□□□□ -1.68
MSS116	YDR194C	FLO11	P08640	1367 aa		4.55	□□□□□ -1.68
MSS116	YDR194C	YLR462W	O13556	202 aa		4.54	□□□□□ -1.68
MSS116	YDR194C	PRE7	P23724	241 aa	Known RBP	4.54	□□□□□ -1.68
MSS116	YDR194C	YEL075C	P39972	122 aa		4.54	□□□□□ -1.68
MSS116	YDR194C	SOK1	P40317	901 aa		4.54	□□□□□ -1.68
MSS116	YDR194C	COG5	P53951	403 aa		4.54	□□□□□ -1.68
MSS116	YDR194C	NIP7	Q08962	181 aa	Known RBP	4.54	□□□□□ -1.68
MSS116	YDR194C	SIR2	P06700	562 aa		4.54	□□□□□ -1.68
MSS116	YDR194C	IRC22	P40006	225 aa		4.54	□□□□□ -1.68
MSS116	YDR194C	YPI1	P43587	155 aa		4.54	□□□□□ -1.68
MSS116	YDR194C	HST4	P53688	370 aa		4.54	□□□□□ -1.68
MSS116	YDR194C	GRH1	Q04410	372 aa	Known RBP	4.54	□□□□□ -1.68
MSS116	YDR194C	PEX11	Q12462	236 aa		4.54	□□□□□ -1.68
MSS116	YDR194C	PAN1	P32521	1480 aa		4.54	□□□□□ -1.68
MSS116	YDR194C	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.53	□□□□□ -1.68	not detected
MSS116	YDR194C	ECM34	P38728	170 aa		4.53	□□□□□ -1.68
MSS116	YDR194C	YNL010W	P53981	241 aa	Known RBP	4.53	□□□□□ -1.68
MSS116	YDR194C	MRPS16	Q02608	121 aa		4.53	□□□□□ -1.68
MSS116	YDR194C	SLD7	Q08457	257 aa		4.53	□□□□□ -1.68
MSS116	YDR194C	ERG24	P32462	438 aa	Known RBP	4.53	□□□□□ -1.68
MSS116	YDR194C	RMD6	P39975	231 aa		4.53	□□□□□ -1.68
MSS116	YDR194C	HMF1	P40037	129 aa	Known RBP	4.53	□□□□□ -1.68
MSS116	YDR194C	UFE1	P41834	346 aa		4.53	□□□□□ -1.68
MSS116	YDR194C	FMP32	P43557	207 aa		4.53	□□□□□ -1.68
MSS116	YDR194C	MDM34	P53083	459 aa		4.53	□□□□□ -1.68
MSS116	YDR194C	YPR127W	Q06494	345 aa		4.53	□□□□□ -1.68
MSS116	YDR194C	TDA8	Q6B2U8	126 aa		4.53	□□□□□ -1.68
MSS116	YDR194C	CCH1	P50077	2039 aa		4.52	□□□□□ -1.69
MSS116	YDR194C	RPS24A	P0CX31	135 aa	Known RBP	4.52	□□□□□ -1.69
MSS116	YDR194C	RPS24B	P0CX32	135 aa	Known RBP	4.52	□□□□□ -1.69
MSS116	YDR194C	AHC2	P25649	128 aa		4.52	□□□□□ -1.69
MSS116	YDR194C	UBC8	P28263	218 aa		4.52	□□□□□ -1.69
MSS116	YDR194C	RPF1	P38805	295 aa	Known RBP	4.52	□□□□□ -1.69
MSS116	YDR194C	PRM10	P42946	383 aa		4.52	□□□□□ -1.69
MSS116	YDR194C	IMP4	P53941	290 aa	Known RBP	4.52	□□□□□ -1.69
MSS116	YDR194C	DYN3	Q04949	312 aa		4.52	□□□□□ -1.69
MSS116	YDR194C	SNF4	P12904	322 aa		4.51	□□□□□ -1.69
MSS116	YDR194C	CNB1	P25296	175 aa		4.51	□□□□□ -1.69
MSS116	YDR194C	SFC1	P33303	322 aa		4.51	□□□□□ -1.69
MSS116	YDR194C	TRM7	P38238	310 aa	Known RBP	4.51	□□□□□ -1.69
MSS116	YDR194C	HSK3	P69852	69 aa		4.51	□□□□□ -1.69
MSS116	YDR194C	LPP1	Q04396	274 aa		4.51	□□□□□ -1.69
MSS116	YDR194C	PST1	Q12355	444 aa		4.51	□□□□□ -1.69
MSS116	YDR194C	FCY2	P17064	533 aa		4.51	□□□□□ -1.69
MSS116	YDR194C	MAG1	P22134	296 aa	Known RBP	4.51	□□□□□ -1.69
MSS116	YDR194C	YCR023C	P25351	611 aa		4.51	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 36 ms