RNA–Protein interactions for RNA: YDR120C

TRM1, Transcript of tRNA methyltransferase, yeast

Gene TRM1, Length 1,713 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TRM1	YDR120C	POP8	P38208	133 aa		3	□□□□□ -1.93
TRM1	YDR120C	DDI1	P40087	428 aa		3	□□□□□ -1.93
TRM1	YDR120C	PHB1	P40961	287 aa		3	□□□□□ -1.93
TRM1	YDR120C	JHD2	P47156	728 aa	Predicted RBP	3	□□□□□ -1.93
TRM1	YDR120C	SDC1	Q03323	175 aa		3	□□□□□ -1.93
TRM1	YDR120C	OST6	Q03723	332 aa		3	□□□□□ -1.93
TRM1	YDR120C	SLD7	Q08457	257 aa		3	□□□□□ -1.93
TRM1	YDR120C	AKR2	Q12013	749 aa		3	□□□□□ -1.93
TRM1	YDR120C	YOS9	Q99220	542 aa		3	□□□□□ -1.93
TRM1	YDR120C	HOC1	P47124	396 aa		2.99	□□□□□ -1.93
TRM1	YDR120C	CTR3	Q06686	241 aa		2.99	□□□□□ -1.93
TRM1	YDR120C	TPO4	Q12256	659 aa		2.99	□□□□□ -1.93
TRM1	YDR120C	CYR1	P08678	2026 aa	Known RBP	2.99	□□□□□ -1.93
TRM1	YDR120C	ADE1	P27616	306 aa		2.99	□□□□□ -1.93
TRM1	YDR120C	KRE6	P32486	720 aa		2.99	□□□□□ -1.93
TRM1	YDR120C	FMT1	P32785	401 aa		2.99	□□□□□ -1.93
TRM1	YDR120C	CAT2	P32796	670 aa	Known RBP	2.99	□□□□□ -1.93
TRM1	YDR120C	AST1	P35183	429 aa		2.99	□□□□□ -1.93
TRM1	YDR120C	CUP9	P41817	306 aa		2.99	□□□□□ -1.93
TRM1	YDR120C	PFS2	P42841	465 aa	Known RBP	2.99	□□□□□ -1.93
TRM1	YDR120C	YJR149W	P47177	404 aa		2.99	□□□□□ -1.93
TRM1	YDR120C	FMP41	P53889	259 aa	Known RBP	2.99	□□□□□ -1.93
TRM1	YDR120C	RRN5	Q02983	363 aa		2.99	□□□□□ -1.93
TRM1	YDR120C	CTS2	Q06350	511 aa		2.99	□□□□□ -1.93
TRM1	YDR120C	YOR342C	Q12182	319 aa		2.99	□□□□□ -1.93
TRM1	YDR120C	PST1	Q12355	444 aa		2.99	□□□□□ -1.93
TRM1	YDR120C	FAS1	P07149	2051 aa	Known RBP	2.98	□□□□□ -1.93
TRM1	YDR120C	YMR316C-A	I2HB70	103 aa		2.98	□□□□□ -1.93
TRM1	YDR120C	AGA2	P32781	87 aa		2.98	□□□□□ -1.93
TRM1	YDR120C	YHI9	P38765	294 aa		2.98	□□□□□ -1.93
TRM1	YDR120C	YFR045W	P43617	309 aa		2.98	□□□□□ -1.93
TRM1	YDR120C	BOL2	P53082	120 aa		2.98	□□□□□ -1.93
TRM1	YDR120C	MDM34	P53083	459 aa		2.98	□□□□□ -1.93
TRM1	YDR120C	GTO3	Q04806	366 aa		2.98	□□□□□ -1.93
TRM1	YDR120C	ADH6	Q04894	360 aa	Known RBP	2.98	□□□□□ -1.93
TRM1	YDR120C	CDC123	Q05791	360 aa		2.98	□□□□□ -1.93
TRM1	YDR120C	NNT1	Q05874	261 aa		2.98	□□□□□ -1.93
TRM1	YDR120C	SME1	Q12330	94 aa	Predicted RBP	2.98	□□□□□ -1.93
TRM1	YDR120C	ATG5	Q12380	294 aa		2.98	□□□□□ -1.93
TRM1	YDR120C	CAM1	P29547	415 aa	Known RBP	2.97	□□□□□ -1.93
TRM1	YDR120C	ALK2	P32789	676 aa	Predicted RBP	2.97	□□□□□ -1.93
TRM1	YDR120C	YBL081W	P38180	368 aa	Known RBP	2.97	□□□□□ -1.93
TRM1	YDR120C	YIL059C	P40520	121 aa		2.97	□□□□□ -1.93
TRM1	YDR120C	TIM21	P53220	239 aa		2.97	□□□□□ -1.93
TRM1	YDR120C	SWT21	P53873	357 aa	Predicted RBP	2.97	□□□□□ -1.93
TRM1	YDR120C	NHP10	Q03435	203 aa		2.97	□□□□□ -1.93
TRM1	YDR120C	BTS1	Q12051	335 aa		2.97	□□□□□ -1.93
TRM1	YDR120C	YPR011C	Q12251	326 aa		2.97	□□□□□ -1.93
TRM1	YDR120C	IES3	Q12345	250 aa		2.97	□□□□□ -1.93
TRM1	YDR120C	CMD1	P06787	147 aa	Known RBP	2.96	□□□□□ -1.93
TRM1	YDR120C	GPA2	P10823	449 aa		2.96	□□□□□ -1.93
TRM1	YDR120C	YAK1	P14680	807 aa		2.96	□□□□□ -1.93
TRM1	YDR120C	RPB4	P20433	221 aa	Predicted RBP	2.96	□□□□□ -1.93
TRM1	YDR120C	RPS27A	P35997	82 aa	Known RBP	2.96	□□□□□ -1.93
TRM1	YDR120C	MED8	P38304	223 aa		2.96	□□□□□ -1.93
TRM1	YDR120C	RPS27B	P38711	82 aa		2.96	□□□□□ -1.93
TRM1	YDR120C	MAL13	P53338	473 aa		2.96	□□□□□ -1.93
TRM1	YDR120C	BOP2	Q06150	570 aa		2.96	□□□□□ -1.93
TRM1	YDR120C	YLR173W	Q06247	608 aa		2.96	□□□□□ -1.93
TRM1	YDR120C	YPR195C	Q06594	109 aa		2.96	□□□□□ -1.93
TRM1	YDR120C	MRP1	P10662	321 aa	Known RBP	2.96	□□□□□ -1.94
TRM1	YDR120C	TAH1	P25638	111 aa	Predicted RBP	2.96	□□□□□ -1.94
TRM1	YDR120C	UBC6	P33296	250 aa	Predicted RBP	2.96	□□□□□ -1.94
TRM1	YDR120C	PHO89	P38361	574 aa		2.96	□□□□□ -1.94
TRM1	YDR120C	APQ12	P40532	138 aa		2.96	□□□□□ -1.94
TRM1	YDR120C	YNL095C	P53932	642 aa		2.96	□□□□□ -1.94
TRM1	YDR120C	GOT1	Q03554	138 aa		2.96	□□□□□ -1.94
TRM1	YDR120C	DXO1	Q06349	442 aa		2.96	□□□□□ -1.94
TRM1	YDR120C	YPR063C	Q12160	140 aa		2.96	□□□□□ -1.94
TRM1	YDR120C	YOL163W	P0CF20	169 aa		2.95	□□□□□ -1.94
TRM1	YDR120C	ERG2	P32352	222 aa		2.95	□□□□□ -1.94
TRM1	YDR120C	PRS2	P38620	318 aa	Known RBP	2.95	□□□□□ -1.94
TRM1	YDR120C	BIG1	P38813	335 aa		2.95	□□□□□ -1.94
TRM1	YDR120C	YER034W	P40022	185 aa	Known RBP	2.95	□□□□□ -1.94
TRM1	YDR120C	RPL10	P41805	221 aa	Known RBP	2.95	□□□□□ -1.94
TRM1	YDR120C	YRB1	P41920	201 aa	Known RBP	2.95	□□□□□ -1.94
TRM1	YDR120C	YJR012C	P47087	207 aa		2.95	□□□□□ -1.94
TRM1	YDR120C	YDR209C	Q03480	137 aa		2.95	□□□□□ -1.94
TRM1	YDR120C	TVP15	Q03860	143 aa		2.95	□□□□□ -1.94
TRM1	YDR120C	HPT1	Q04178	221 aa	Known RBP	2.95	□□□□□ -1.94
TRM1	YDR120C	SDO1	Q07953	250 aa	Known RBP	2.95	□□□□□ -1.94
TRM1	YDR120C	RPS23A	P0CX29	145 aa	Known RBP	2.94	□□□□□ -1.94
TRM1	YDR120C	RPS23B	P0CX30	145 aa		2.94	□□□□□ -1.94
TRM1	YDR120C	PTM1	P32857	523 aa		2.94	□□□□□ -1.94
TRM1	YDR120C	SUI1	P32911	108 aa	Known RBP	2.94	□□□□□ -1.94
TRM1	YDR120C	PRS4	P38063	326 aa	Predicted RBP	2.94	□□□□□ -1.94
TRM1	YDR120C	RPL22B	P56628	122 aa	Known RBP	2.94	□□□□□ -1.94
TRM1	YDR120C	RRP40	Q08285	240 aa	Known RBP	2.94	□□□□□ -1.94
TRM1	YDR120C	MDM32	Q12171	622 aa		2.94	□□□□□ -1.94
TRM1	YDR120C	PRM7	Q12459	698 aa		2.94	□□□□□ -1.94
TRM1	YDR120C	SEC16	P48415	2195 aa	Known RBP	2.94	□□□□□ -1.94
TRM1	YDR120C	CBF1	P17106	351 aa		2.93	□□□□□ -1.94
TRM1	YDR120C	SEC14	P24280	304 aa	Known RBP	2.93	□□□□□ -1.94
TRM1	YDR120C	ECM14	P38836	430 aa		2.93	□□□□□ -1.94
TRM1	YDR120C	ICE2	P40499	491 aa		2.93	□□□□□ -1.94
TRM1	YDR120C	ECO1	P43605	281 aa		2.93	□□□□□ -1.94
TRM1	YDR120C	RPE1	P46969	238 aa		2.93	□□□□□ -1.94
TRM1	YDR120C	CSN9	Q03981	162 aa		2.93	□□□□□ -1.94
TRM1	YDR120C	RUD3	Q12234	484 aa	Known RBP	2.93	□□□□□ -1.94
TRM1	YDR120C	PRR2	Q12310	699 aa		2.93	□□□□□ -1.94

Retrieved 100 of 5,963 RNA–protein pairs in 46.3 ms