RNA–Protein interactions for RNA: YDL231C

BRE4, Transcript of Zinc finger protein containing five transmembrane domains, yeastyeast

Gene BRE4, Length 3,378 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRE4YDL231C UTR1P21373 530 aa3.68□□□□□ -1.82
BRE4YDL231C AFG1P32317 509 aa3.68□□□□□ -1.82
BRE4YDL231C ARO4P32449 370 aaKnown RBP3.68□□□□□ -1.82
BRE4YDL231C RIB5P38145 238 aa3.68□□□□□ -1.82
BRE4YDL231C AIR1P40507 360 aaKnown RBP3.68□□□□□ -1.82
BRE4YDL231C SNN1P48232 102 aa3.68□□□□□ -1.82
BRE4YDL231C YGL235WP53071 178 aa3.68□□□□□ -1.82
BRE4YDL231C ARO8P53090 500 aaKnown RBP3.68□□□□□ -1.82
BRE4YDL231C SCW4P53334 386 aaKnown RBP3.68□□□□□ -1.82
BRE4YDL231C ATG4P53867 494 aa3.68□□□□□ -1.82
BRE4YDL231C YDR209CQ03480 137 aa3.68□□□□□ -1.82
BRE4YDL231C GIM5Q04493 163 aa3.68□□□□□ -1.82
BRE4YDL231C ASM4Q05166 528 aa3.68□□□□□ -1.82
BRE4YDL231C ATG33Q06485 197 aa3.68□□□□□ -1.82
BRE4YDL231C YOR186WQ08560 144 aa3.68□□□□□ -1.82
BRE4YDL231C CMC2Q3E7A4 109 aa3.68□□□□□ -1.82
BRE4YDL231C TEL1P38110 2787 aa3.67□□□□□ -1.82
BRE4YDL231C YBR085C-AO43137 85 aa3.67□□□□□ -1.82
BRE4YDL231C TDH3P00359 332 aaKnown RBP RIP-Chip data3.67□□□□□ -1.82not detected
BRE4YDL231C REC114P32841 428 aa3.67□□□□□ -1.82
BRE4YDL231C LSM12P38828 187 aaKnown RBP3.67□□□□□ -1.82
BRE4YDL231C CAF16P43569 289 aa3.67□□□□□ -1.82
BRE4YDL231C YGL117WP53133 265 aa3.67□□□□□ -1.82
BRE4YDL231C ORM1P53224 222 aa3.67□□□□□ -1.82
BRE4YDL231C TIM44Q01852 431 aa3.67□□□□□ -1.82
BRE4YDL231C YDR415CQ04033 374 aaPredicted RBP3.67□□□□□ -1.82
BRE4YDL231C HRI1Q05905 244 aaKnown RBP3.67□□□□□ -1.82
BRE4YDL231C RAF1Q06891 181 aa3.67□□□□□ -1.82
BRE4YDL231C HNT3Q08702 217 aa3.67□□□□□ -1.82
BRE4YDL231C FOL3Q12676 427 aaPredicted RBP3.67□□□□□ -1.82
BRE4YDL231C MRS4P23500 304 aa3.67□□□□□ -1.82
BRE4YDL231C GLC7P32598 312 aaKnown RBP3.67□□□□□ -1.82
BRE4YDL231C MNS1P32906 549 aa3.67□□□□□ -1.82
BRE4YDL231C YKR073CP36153 106 aa3.67□□□□□ -1.82
BRE4YDL231C RTC3P38804 111 aaPredicted RBP3.67□□□□□ -1.82
BRE4YDL231C PAC2P39937 518 aa3.67□□□□□ -1.82
BRE4YDL231C AGE2P40529 298 aa3.67□□□□□ -1.82
BRE4YDL231C CTK2P46962 323 aa3.67□□□□□ -1.82
BRE4YDL231C PRY1P47032 299 aa3.67□□□□□ -1.82
BRE4YDL231C YGL204CP53089 101 aa3.67□□□□□ -1.82
BRE4YDL231C YGL159WP53110 370 aa3.67□□□□□ -1.82
BRE4YDL231C FIT3Q08907 204 aa3.67□□□□□ -1.82
BRE4YDL231C YOR192C-CQ3E736 78 aa3.67□□□□□ -1.82
BRE4YDL231C YEL057CP39983 233 aa3.66□□□□□ -1.82
BRE4YDL231C SMB1P40018 196 aaKnown RBP3.66□□□□□ -1.82
BRE4YDL231C YIL029CP40538 142 aa3.66□□□□□ -1.82
BRE4YDL231C HAM1P47119 197 aaKnown RBP3.66□□□□□ -1.82
BRE4YDL231C WSC2P53832 503 aa3.66□□□□□ -1.82
BRE4YDL231C YMR210WQ03649 449 aa3.66□□□□□ -1.82
BRE4YDL231C RPL7AP05737 244 aaKnown RBP3.66□□□□□ -1.82
BRE4YDL231C SPS4P09937 338 aa3.66□□□□□ -1.82
BRE4YDL231C URA5P13298 226 aaKnown RBP3.66□□□□□ -1.82
BRE4YDL231C APL3P38065 1025 aa3.66□□□□□ -1.82
BRE4YDL231C YMR144WP40214 342 aaKnown RBP3.66□□□□□ -1.82
BRE4YDL231C RTS2P40962 232 aa3.66□□□□□ -1.82
BRE4YDL231C CAC2Q04199 468 aa3.66□□□□□ -1.82
BRE4YDL231C YOR015WQ12169 119 aa3.66□□□□□ -1.82
BRE4YDL231C RPL7BQ12213 244 aaKnown RBP3.66□□□□□ -1.82
BRE4YDL231C VAM3Q12241 283 aa3.66□□□□□ -1.82
BRE4YDL231C YOS1Q3E834 85 aa3.66□□□□□ -1.82
BRE4YDL231C SCEIP03882 235 aa3.66□□□□□ -1.82
BRE4YDL231C MOB2P43563 287 aa3.66□□□□□ -1.82
BRE4YDL231C DUO1P53168 247 aaKnown RBP3.66□□□□□ -1.82
BRE4YDL231C GAS2Q06135 555 aa3.66□□□□□ -1.82
BRE4YDL231C NOC4Q06512 552 aaPredicted RBP3.66□□□□□ -1.82
BRE4YDL231C RFM1Q12192 310 aa3.66□□□□□ -1.82
BRE4YDL231C SET6Q12529 373 aa3.66□□□□□ -1.82
BRE4YDL231C UBA3Q99344 299 aa3.66□□□□□ -1.82
BRE4YDL231C MRPL33P20084 86 aa3.65□□□□□ -1.82
BRE4YDL231C RFA1P22336 621 aaKnown RBP3.65□□□□□ -1.82
BRE4YDL231C YCR061WP25639 631 aa3.65□□□□□ -1.82
BRE4YDL231C MRPS5P33759 307 aa3.65□□□□□ -1.82
BRE4YDL231C YER121WP40076 114 aa3.65□□□□□ -1.82
BRE4YDL231C BNA2P47125 453 aa3.65□□□□□ -1.82
BRE4YDL231C TNA1P53322 534 aa3.65□□□□□ -1.82
BRE4YDL231C RCE1Q03530 315 aa3.65□□□□□ -1.82
BRE4YDL231C CKS1P20486 150 aaKnown RBP3.65□□□□□ -1.83
BRE4YDL231C DEG1P31115 442 aaKnown RBP3.65□□□□□ -1.83
BRE4YDL231C FAT1P38225 669 aa3.65□□□□□ -1.83
BRE4YDL231C SWM2P40342 146 aa3.65□□□□□ -1.83
BRE4YDL231C SNX4P47057 423 aa3.65□□□□□ -1.83
BRE4YDL231C YPR098CQ06089 161 aa3.65□□□□□ -1.83
BRE4YDL231C MED4Q12343 284 aa3.65□□□□□ -1.83
BRE4YDL231C DGK1Q12382 290 aa3.65□□□□□ -1.83
BRE4YDL231C MRPL23Q12487 163 aaPredicted RBP3.65□□□□□ -1.83
BRE4YDL231C ATG40Q99325 256 aa3.65□□□□□ -1.83
BRE4YDL231C COX9P07255 59 aa3.65□□□□□ -1.83
BRE4YDL231C RFA3P26755 122 aaKnown RBP3.65□□□□□ -1.83
BRE4YDL231C TRR1P29509 319 aaKnown RBP3.65□□□□□ -1.83
BRE4YDL231C AIM46P38885 310 aa3.65□□□□□ -1.83
BRE4YDL231C UME6P39001 836 aa3.65□□□□□ -1.83
BRE4YDL231C RIM9Q04734 239 aa3.65□□□□□ -1.83
BRE4YDL231C MATALPHA1P0CY06 175 aa3.64□□□□□ -1.83
BRE4YDL231C HMLALPHA1P0CY07 175 aa3.64□□□□□ -1.83
BRE4YDL231C SPO13P23624 291 aa3.64□□□□□ -1.83
BRE4YDL231C YER085CP40058 173 aa3.64□□□□□ -1.83
BRE4YDL231C BMT5P40493 336 aa3.64□□□□□ -1.83
BRE4YDL231C EMC5P40540 141 aa3.64□□□□□ -1.83
BRE4YDL231C MTL1P53214 551 aa3.64□□□□□ -1.83
BRE4YDL231C NRG1Q03125 231 aa3.64□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 23.5 ms