RNA–Protein interactions for RNA: YCL059C

KRR1, Transcript of Nucleolar protein required for rRNA synthesis and ribosomal assembly, yeastyeast

Gene KRR1, Length 951 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KRR1YCL059C RPS16BP0CX52 143 aaKnown RBP7.43□□□□□ -1.22
KRR1YCL059C SCO1P23833 295 aa7.43□□□□□ -1.22
KRR1YCL059C SED4P25365 1065 aa7.43□□□□□ -1.22
KRR1YCL059C NUD1P32336 851 aa7.43□□□□□ -1.22
KRR1YCL059C SOF1P33750 489 aaKnown RBP7.43□□□□□ -1.22
KRR1YCL059C YND1P40009 630 aa7.43□□□□□ -1.22
KRR1YCL059C AIR1P40507 360 aaKnown RBP7.43□□□□□ -1.22
KRR1YCL059C NSE4P43124 402 aa7.43□□□□□ -1.22
KRR1YCL059C SNO1Q03144 224 aa7.43□□□□□ -1.22
KRR1YCL059C NUP53Q03790 475 aa7.43□□□□□ -1.22
KRR1YCL059C HRI1Q05905 244 aaKnown RBP7.43□□□□□ -1.22
KRR1YCL059C PAM18Q07914 168 aa7.43□□□□□ -1.22
KRR1YCL059C COX1P00401 534 aa7.42□□□□□ -1.22
KRR1YCL059C YPT1P01123 206 aaKnown RBP7.42□□□□□ -1.22
KRR1YCL059C YLL053CP0CD98 152 aa7.42□□□□□ -1.22
KRR1YCL059C MIR1P23641 311 aaKnown RBP7.42□□□□□ -1.22
KRR1YCL059C ATG8P38182 117 aaRIP-Chip data7.42□□□□□ -1.22not detected
KRR1YCL059C CDS1P38221 457 aa7.42□□□□□ -1.22
KRR1YCL059C FAT1P38225 669 aa7.42□□□□□ -1.22
KRR1YCL059C SDH8P38345 138 aa7.42□□□□□ -1.22
KRR1YCL059C IKS1P47042 667 aa7.42□□□□□ -1.22
KRR1YCL059C PEF1P53238 335 aa7.42□□□□□ -1.22
KRR1YCL059C GIS1Q03833 894 aa7.42□□□□□ -1.22
KRR1YCL059C TSA2Q04120 196 aa7.42□□□□□ -1.22
KRR1YCL059C YDR286CQ05530 114 aa7.42□□□□□ -1.22
KRR1YCL059C YOR186WQ08560 144 aa7.42□□□□□ -1.22
KRR1YCL059C THI72Q08579 599 aa7.42□□□□□ -1.22
KRR1YCL059C AKR2Q12013 749 aa7.42□□□□□ -1.22
KRR1YCL059C FCY22Q12119 530 aa7.42□□□□□ -1.22
KRR1YCL059C FRE7Q12333 620 aa7.42□□□□□ -1.22
KRR1YCL059C CDC28P00546 298 aaKnown RBP7.41□□□□□ -1.22
KRR1YCL059C MCM1P11746 286 aa7.41□□□□□ -1.22
KRR1YCL059C PEX7P39108 375 aa7.41□□□□□ -1.22
KRR1YCL059C PAC2P39937 518 aa7.41□□□□□ -1.22
KRR1YCL059C VMA21P41806 77 aa7.41□□□□□ -1.22
KRR1YCL059C PGU1P47180 361 aa7.41□□□□□ -1.22
KRR1YCL059C MSY1P48527 492 aa7.41□□□□□ -1.22
KRR1YCL059C SOL1P50278 321 aa7.41□□□□□ -1.22
KRR1YCL059C ERG25P53045 309 aa7.41□□□□□ -1.22
KRR1YCL059C NSA1P53136 463 aaPredicted RBP7.41□□□□□ -1.22
KRR1YCL059C YIF1P53845 314 aaKnown RBP7.41□□□□□ -1.22
KRR1YCL059C YVH1Q02256 364 aaKnown RBP7.41□□□□□ -1.22
KRR1YCL059C EST3Q03096 181 aa7.41□□□□□ -1.22
KRR1YCL059C PRP11Q07350 266 aaPredicted RBP7.41□□□□□ -1.22
KRR1YCL059C YFH1Q07540 174 aa7.41□□□□□ -1.22
KRR1YCL059C AIM45Q12480 344 aaKnown RBP7.41□□□□□ -1.22
KRR1YCL059C CMC2Q3E7A4 109 aa7.41□□□□□ -1.22
KRR1YCL059C YDR034W-BQ6Q5X2 51 aa7.41□□□□□ -1.22
KRR1YCL059C Q0142Q9ZZW4 58 aa7.41□□□□□ -1.22
KRR1YCL059C REC114P32841 428 aa7.4□□□□□ -1.22
KRR1YCL059C ARC40P38328 384 aaKnown RBP7.4□□□□□ -1.22
KRR1YCL059C ATF1P40353 525 aa7.4□□□□□ -1.22
KRR1YCL059C RTS2P40962 232 aa7.4□□□□□ -1.22
KRR1YCL059C YJR012CP47087 207 aa7.4□□□□□ -1.22
KRR1YCL059C TIM21P53220 239 aa7.4□□□□□ -1.22
KRR1YCL059C MRPL22P53881 309 aa7.4□□□□□ -1.22
KRR1YCL059C ATG21Q02887 496 aa7.4□□□□□ -1.22
KRR1YCL059C DCS1Q06151 350 aa7.4□□□□□ -1.22
KRR1YCL059C RFU1Q08003 200 aa7.4□□□□□ -1.22
KRR1YCL059C YOR015WQ12169 119 aa7.4□□□□□ -1.22
KRR1YCL059C SME1Q12330 94 aaPredicted RBP7.4□□□□□ -1.22
KRR1YCL059C YLR365WQ7LIF2 110 aa7.4□□□□□ -1.22
KRR1YCL059C ATG40Q99325 256 aa7.4□□□□□ -1.22
KRR1YCL059C CCH1P50077 2039 aa7.39□□□□□ -1.23
KRR1YCL059C TY1A-DR4O74302 440 aa7.39□□□□□ -1.23
KRR1YCL059C TY1A-AP0CX57 440 aa7.39□□□□□ -1.23
KRR1YCL059C TY1A-PR1P0CX58 440 aa7.39□□□□□ -1.23
KRR1YCL059C TY1A-ORP0CX59 440 aa7.39□□□□□ -1.23
KRR1YCL059C TY1A-PR2P0CX60 440 aa7.39□□□□□ -1.23
KRR1YCL059C TY1A-DR5P0CX65 440 aa7.39□□□□□ -1.23
KRR1YCL059C TY1A-ER2P0CX66 440 aa7.39□□□□□ -1.23
KRR1YCL059C TY1A-GR3P0CX67 440 aa7.39□□□□□ -1.23
KRR1YCL059C TY1A-LR1P0CX68 440 aa7.39□□□□□ -1.23
KRR1YCL059C TY1A-MR2P0CX69 440 aa7.39□□□□□ -1.23
KRR1YCL059C FRS1P15624 595 aaKnown RBP7.39□□□□□ -1.23
KRR1YCL059C RPB3P16370 318 aaKnown RBP7.39□□□□□ -1.23
KRR1YCL059C MDH2P22133 377 aa7.39□□□□□ -1.23
KRR1YCL059C PCL1P24867 279 aa7.39□□□□□ -1.23
KRR1YCL059C SLM6P38343 150 aa7.39□□□□□ -1.23
KRR1YCL059C LSM8P47093 109 aaKnown RBP7.39□□□□□ -1.23
KRR1YCL059C TY1A-JR2P47099 440 aa7.39□□□□□ -1.23
KRR1YCL059C SKO1Q02100 647 aa7.39□□□□□ -1.23
KRR1YCL059C NRG1Q03125 231 aa7.39□□□□□ -1.23
KRR1YCL059C TY1A-DR1Q03856 440 aa7.39□□□□□ -1.23
KRR1YCL059C TY1A-ML1Q04706 440 aaKnown RBP7.39□□□□□ -1.23
KRR1YCL059C YMR254CQ04838 102 aa7.39□□□□□ -1.23
KRR1YCL059C ALG6Q12001 544 aaKnown RBP7.39□□□□□ -1.23
KRR1YCL059C TY1A-BRQ12217 440 aa7.39□□□□□ -1.23
KRR1YCL059C TY1A-NL2Q12470 440 aa7.39□□□□□ -1.23
KRR1YCL059C TY1A-GR2Q12485 440 aa7.39□□□□□ -1.23
KRR1YCL059C COX19Q3E731 98 aa7.39□□□□□ -1.23
KRR1YCL059C TY1A-LR4P0C2I8 440 aaKnown RBP7.38□□□□□ -1.23
KRR1YCL059C TY1A-DR6P0CX70 440 aa7.38□□□□□ -1.23
KRR1YCL059C TY1A-ER1P0CX71 440 aa7.38□□□□□ -1.23
KRR1YCL059C TY1A-LR2P0CX72 440 aa7.38□□□□□ -1.23
KRR1YCL059C TY1A-PLP0CX73 440 aa7.38□□□□□ -1.23
KRR1YCL059C TY1A-JR1P0CX74 440 aa7.38□□□□□ -1.23
KRR1YCL059C TY1A-LR3P0CX75 440 aa7.38□□□□□ -1.23
KRR1YCL059C TY1A-ML2P0CX76 440 aa7.38□□□□□ -1.23
KRR1YCL059C SEC59P20048 519 aa7.38□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms