RNA–Protein interactions for RNA: YBR258C

SHG1, Transcript of Subunit of the COMPASS (Set1C) complex, yeastyeast

Gene SHG1, Length 429 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHG1YBR258C COX2P00410 251 aa2.14□□□□□ -2.07
SHG1YBR258C CPA1P07258 411 aaKnown RBP2.14□□□□□ -2.07
SHG1YBR258C POF1P25576 258 aa2.14□□□□□ -2.07
SHG1YBR258C CAT2P32796 670 aaKnown RBP2.14□□□□□ -2.07
SHG1YBR258C YBL081WP38180 368 aaKnown RBP2.14□□□□□ -2.07
SHG1YBR258C ARN2P38724 620 aa2.14□□□□□ -2.07
SHG1YBR258C SUR2P38992 349 aa2.14□□□□□ -2.07
SHG1YBR258C MEP1P40260 492 aa2.14□□□□□ -2.07
SHG1YBR258C MNT4P53745 580 aa2.14□□□□□ -2.07
SHG1YBR258C FMP41P53889 259 aaKnown RBP2.14□□□□□ -2.07
SHG1YBR258C YDR114CQ04597 100 aa2.14□□□□□ -2.07
SHG1YBR258C RLP24Q07915 199 aaKnown RBP2.14□□□□□ -2.07
SHG1YBR258C FEX1Q08913 375 aa2.14□□□□□ -2.07
SHG1YBR258C FEX2Q08991 375 aa2.14□□□□□ -2.07
SHG1YBR258C MET2P08465 486 aa2.13□□□□□ -2.07
SHG1YBR258C COS2P0CX12 379 aa2.13□□□□□ -2.07
SHG1YBR258C COS3P0CX13 379 aa2.13□□□□□ -2.07
SHG1YBR258C CAM1P29547 415 aaKnown RBP2.13□□□□□ -2.07
SHG1YBR258C ERG2P32352 222 aa2.13□□□□□ -2.07
SHG1YBR258C RIB7P33312 244 aa2.13□□□□□ -2.07
SHG1YBR258C OPY1P38271 328 aa2.13□□□□□ -2.07
SHG1YBR258C HSM3P38348 480 aa2.13□□□□□ -2.07
SHG1YBR258C PHO89P38361 574 aa2.13□□□□□ -2.07
SHG1YBR258C PRM9P39551 298 aa2.13□□□□□ -2.07
SHG1YBR258C SCC4P40090 624 aa2.13□□□□□ -2.07
SHG1YBR258C YER189WP40104 122 aa2.13□□□□□ -2.07
SHG1YBR258C PRE6P40303 254 aaKnown RBP2.13□□□□□ -2.07
SHG1YBR258C COA1P40452 197 aa2.13□□□□□ -2.07
SHG1YBR258C AGE2P40529 298 aa2.13□□□□□ -2.07
SHG1YBR258C YGL088WP53151 121 aa2.13□□□□□ -2.07
SHG1YBR258C PEX31P53203 462 aa2.13□□□□□ -2.07
SHG1YBR258C TIM13P53299 105 aa2.13□□□□□ -2.07
SHG1YBR258C DIA1P54005 336 aa2.13□□□□□ -2.07
SHG1YBR258C VPS71Q03433 280 aa2.13□□□□□ -2.07
SHG1YBR258C FCF1Q05498 189 aaPredicted RBP2.13□□□□□ -2.07
SHG1YBR258C NKP2Q06162 153 aa2.13□□□□□ -2.07
SHG1YBR258C ARV1Q06541 321 aa2.13□□□□□ -2.07
SHG1YBR258C SME1Q12330 94 aaPredicted RBP2.13□□□□□ -2.07
SHG1YBR258C OCA6Q12454 224 aa2.13□□□□□ -2.07
SHG1YBR258C FLO9P39712 1322 aa2.13□□□□□ -2.07
SHG1YBR258C YMR316C-AI2HB70 103 aa2.12□□□□□ -2.07
SHG1YBR258C YPR096CO13587 100 aa2.12□□□□□ -2.07
SHG1YBR258C MDM35O60200 86 aa2.12□□□□□ -2.07
SHG1YBR258C RPL24AP04449 155 aaKnown RBP2.12□□□□□ -2.07
SHG1YBR258C MIG1P27705 504 aa2.12□□□□□ -2.07
SHG1YBR258C BMH1P29311 267 aaKnown RBP2.12□□□□□ -2.07
SHG1YBR258C YER084WP40057 128 aa2.12□□□□□ -2.07
SHG1YBR258C DDI1P40087 428 aa2.12□□□□□ -2.07
SHG1YBR258C TAD2P47058 250 aa2.12□□□□□ -2.07
SHG1YBR258C EMC2P47133 292 aaKnown RBP2.12□□□□□ -2.07
SHG1YBR258C YNL095CP53932 642 aa2.12□□□□□ -2.07
SHG1YBR258C SWC7Q06707 132 aa2.12□□□□□ -2.07
SHG1YBR258C TIM22Q12328 207 aa2.12□□□□□ -2.07
SHG1YBR258C HIS3P06633 220 aa2.11□□□□□ -2.07
SHG1YBR258C KRE1P17260 313 aa2.11□□□□□ -2.07
SHG1YBR258C CSG2P35206 410 aa2.11□□□□□ -2.07
SHG1YBR258C PRS3P38689 320 aaKnown RBP2.11□□□□□ -2.07
SHG1YBR258C GRE3P38715 327 aaKnown RBP RIP-Chip data2.11□□□□□ -2.07not detected
SHG1YBR258C RPE1P46969 238 aa2.11□□□□□ -2.07
SHG1YBR258C MIG2P53035 382 aa2.11□□□□□ -2.07
SHG1YBR258C ALG9P53868 555 aaKnown RBP2.11□□□□□ -2.07
SHG1YBR258C YPL039WQ03080 316 aa2.11□□□□□ -2.07
SHG1YBR258C SMT3Q12306 101 aaKnown RBP2.11□□□□□ -2.07
SHG1YBR258C AGC1Q12482 902 aa2.11□□□□□ -2.07
SHG1YBR258C YBL112CQ3E7Y4 105 aa2.11□□□□□ -2.07
SHG1YBR258C YEL028WP39989 153 aa2.1□□□□□ -2.07
SHG1YBR258C YFL051CP43552 160 aa2.1□□□□□ -2.07
SHG1YBR258C TIM21P53220 239 aa2.1□□□□□ -2.07
SHG1YBR258C RTC4P53850 401 aa2.1□□□□□ -2.07
SHG1YBR258C ATC1Q04005 294 aa2.1□□□□□ -2.07
SHG1YBR258C COX20Q04935 205 aa2.1□□□□□ -2.07
SHG1YBR258C SNF8Q12483 233 aa2.1□□□□□ -2.07
SHG1YBR258C NOT5Q12514 560 aaPredicted RBP2.1□□□□□ -2.07
SHG1YBR258C ISD11Q6Q560 94 aa2.1□□□□□ -2.07
SHG1YBR258C Q0144Q9ZZW2 109 aa2.1□□□□□ -2.07
SHG1YBR258C TOM40P23644 387 aaKnown RBP2.09□□□□□ -2.07
SHG1YBR258C GIM4P40005 111 aaKnown RBP2.09□□□□□ -2.07
SHG1YBR258C AGX1P43567 385 aa2.09□□□□□ -2.07
SHG1YBR258C TRM12Q04235 462 aa2.09□□□□□ -2.07
SHG1YBR258C YOR032W-AQ8TGS1 66 aa2.09□□□□□ -2.07
SHG1YBR258C CDC36P06100 191 aaPredicted RBP2.08□□□□□ -2.08
SHG1YBR258C MATALPHA2P0CY08 210 aa2.08□□□□□ -2.08
SHG1YBR258C HMLALPHA2P0CY09 210 aa2.08□□□□□ -2.08
SHG1YBR258C YHL037CP38733 133 aa2.08□□□□□ -2.08
SHG1YBR258C YHR045WP38775 560 aa2.08□□□□□ -2.08
SHG1YBR258C YIR020CP40575 100 aa2.08□□□□□ -2.08
SHG1YBR258C SLX9P53251 210 aaPredicted RBP2.08□□□□□ -2.08
SHG1YBR258C MAL13P53338 473 aa2.08□□□□□ -2.08
SHG1YBR258C RIM9Q04734 239 aa2.08□□□□□ -2.08
SHG1YBR258C CTR3Q06686 241 aa2.08□□□□□ -2.08
SHG1YBR258C YFR010W-AP0C5N0 62 aa2.07□□□□□ -2.08
SHG1YBR258C MGM101P32787 269 aaKnown RBP2.07□□□□□ -2.08
SHG1YBR258C PRP18P33411 251 aaPredicted RBP2.07□□□□□ -2.08
SHG1YBR258C PRS2P38620 318 aaKnown RBP2.07□□□□□ -2.08
SHG1YBR258C YHL049CP38722 271 aa2.07□□□□□ -2.08
SHG1YBR258C MNN5P46982 586 aa2.07□□□□□ -2.08
SHG1YBR258C SYF2P53277 215 aaPredicted RBP2.07□□□□□ -2.08
SHG1YBR258C MPP6P53725 186 aaPredicted RBP2.07□□□□□ -2.08
SHG1YBR258C AAH1P53909 347 aa2.07□□□□□ -2.08
SHG1YBR258C CGI121Q03705 181 aaKnown RBP2.07□□□□□ -2.08
Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms