RNA–Protein interactions for RNA: YBR223C

TDP1, Transcript of Tyrosyl-DNA phosphodiesterase I, yeastyeast

Gene TDP1, Length 1,635 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TDP1YBR223C GTT1P40582 234 aa6.03□□□□□ -1.44
TDP1YBR223C MID1P41821 548 aa6.03□□□□□ -1.44
TDP1YBR223C MSY1P48527 492 aa6.03□□□□□ -1.44
TDP1YBR223C FIT1Q04433 528 aa6.03□□□□□ -1.44
TDP1YBR223C YPD1Q07688 167 aa6.03□□□□□ -1.44
TDP1YBR223C HUT1Q12520 339 aa6.03□□□□□ -1.44
TDP1YBR223C POL2P21951 2222 aaKnown RBP6.02□□□□□ -1.45
TDP1YBR223C TDH3P00359 332 aaKnown RBP RIP-Chip data6.02□□□□□ -1.45not detected
TDP1YBR223C CDC28P00546 298 aaKnown RBP6.02□□□□□ -1.45
TDP1YBR223C RPP2BP02400 110 aaKnown RBP6.02□□□□□ -1.45
TDP1YBR223C GDH1P07262 454 aaKnown RBP6.02□□□□□ -1.45
TDP1YBR223C MDH2P22133 377 aa6.02□□□□□ -1.45
TDP1YBR223C REC114P32841 428 aa6.02□□□□□ -1.45
TDP1YBR223C UTH1P36135 365 aa6.02□□□□□ -1.45
TDP1YBR223C ERV15P38312 142 aa6.02□□□□□ -1.45
TDP1YBR223C ARC40P38328 384 aaKnown RBP6.02□□□□□ -1.45
TDP1YBR223C NSE4P43124 402 aa6.02□□□□□ -1.45
TDP1YBR223C SOL1P50278 321 aa6.02□□□□□ -1.45
TDP1YBR223C SKO1Q02100 647 aa6.02□□□□□ -1.45
TDP1YBR223C MEH1Q02205 184 aa6.02□□□□□ -1.45
TDP1YBR223C ATG21Q02887 496 aa6.02□□□□□ -1.45
TDP1YBR223C ADD37Q03233 198 aa6.02□□□□□ -1.45
TDP1YBR223C DCS1Q06151 350 aa6.02□□□□□ -1.45
TDP1YBR223C GRE1Q08969 168 aa6.02□□□□□ -1.45
TDP1YBR223C USB1Q12208 290 aaKnown RBP6.02□□□□□ -1.45
TDP1YBR223C COX19Q3E731 98 aa6.02□□□□□ -1.45
TDP1YBR223C RPS16AP0CX51 143 aaKnown RBP6.01□□□□□ -1.45
TDP1YBR223C RPS16BP0CX52 143 aaKnown RBP6.01□□□□□ -1.45
TDP1YBR223C MCM1P11746 286 aa6.01□□□□□ -1.45
TDP1YBR223C GLC7P32598 312 aaKnown RBP6.01□□□□□ -1.45
TDP1YBR223C YEA4P40004 342 aa6.01□□□□□ -1.45
TDP1YBR223C SPC25P40014 221 aa6.01□□□□□ -1.45
TDP1YBR223C RFC2P40348 353 aa6.01□□□□□ -1.45
TDP1YBR223C GWT1P47026 490 aa6.01□□□□□ -1.45
TDP1YBR223C SLX9P53251 210 aaPredicted RBP6.01□□□□□ -1.45
TDP1YBR223C NRM1P53718 249 aa6.01□□□□□ -1.45
TDP1YBR223C HHT1P61830 136 aa6.01□□□□□ -1.45
TDP1YBR223C YDR415CQ04033 374 aaPredicted RBP6.01□□□□□ -1.45
TDP1YBR223C YDR387CQ04162 555 aa6.01□□□□□ -1.45
TDP1YBR223C HRI1Q05905 244 aaKnown RBP6.01□□□□□ -1.45
TDP1YBR223C YDL086WQ07505 273 aa6.01□□□□□ -1.45
TDP1YBR223C AKR2Q12013 749 aa6.01□□□□□ -1.45
TDP1YBR223C YOR032W-AQ8TGS1 66 aa6.01□□□□□ -1.45
TDP1YBR223C RPL17AP05740 184 aaKnown RBP6□□□□□ -1.45
TDP1YBR223C ERG8P24521 451 aa6□□□□□ -1.45
TDP1YBR223C BRR2P32639 2163 aaKnown RBP6□□□□□ -1.45
TDP1YBR223C MNS1P32906 549 aa6□□□□□ -1.45
TDP1YBR223C ATG8P38182 117 aaRIP-Chip data6□□□□□ -1.45not detected
TDP1YBR223C YBR096WP38256 230 aa6□□□□□ -1.45
TDP1YBR223C AIM3P38266 947 aaKnown RBP6□□□□□ -1.45
TDP1YBR223C RPL17BP46990 184 aaKnown RBP6□□□□□ -1.45
TDP1YBR223C RPA34P47006 233 aaPredicted RBP6□□□□□ -1.45
TDP1YBR223C IKS1P47042 667 aa6□□□□□ -1.45
TDP1YBR223C YIF1P53845 314 aaKnown RBP6□□□□□ -1.45
TDP1YBR223C MRPL22P53881 309 aa6□□□□□ -1.45
TDP1YBR223C TMA23Q03525 211 aa6□□□□□ -1.45
TDP1YBR223C YOR186WQ08560 144 aa6□□□□□ -1.45
TDP1YBR223C YPT1P01123 206 aaKnown RBP5.99□□□□□ -1.45
TDP1YBR223C YFR010W-AP0C5N0 62 aa5.99□□□□□ -1.45
TDP1YBR223C MRS4P23500 304 aa5.99□□□□□ -1.45
TDP1YBR223C OCH1P31755 480 aa5.99□□□□□ -1.45
TDP1YBR223C SWD2P36104 329 aaPredicted RBP5.99□□□□□ -1.45
TDP1YBR223C SHM2P37291 469 aaKnown RBP5.99□□□□□ -1.45
TDP1YBR223C XBP1P40489 647 aa5.99□□□□□ -1.45
TDP1YBR223C YJR012CP47087 207 aa5.99□□□□□ -1.45
TDP1YBR223C OCA1P50946 238 aaPredicted RBP5.99□□□□□ -1.45
TDP1YBR223C YNR066CP53752 436 aa5.99□□□□□ -1.45
TDP1YBR223C YNL165WP53891 406 aa5.99□□□□□ -1.45
TDP1YBR223C MRP51Q02950 344 aa5.99□□□□□ -1.45
TDP1YBR223C TRS23Q03784 219 aa5.99□□□□□ -1.45
TDP1YBR223C GMC1Q04399 608 aa5.99□□□□□ -1.45
TDP1YBR223C YDR286CQ05530 114 aa5.99□□□□□ -1.45
TDP1YBR223C THI72Q08579 599 aa5.99□□□□□ -1.45
TDP1YBR223C YOR015WQ12169 119 aa5.99□□□□□ -1.45
TDP1YBR223C AGC1Q12482 902 aa5.99□□□□□ -1.45
TDP1YBR223C YPR145C-AQ2V2P0 78 aa5.99□□□□□ -1.45
TDP1YBR223C YLR365WQ7LIF2 110 aa5.99□□□□□ -1.45
TDP1YBR223C RPL25P04456 142 aaKnown RBP5.99□□□□□ -1.45
TDP1YBR223C HOP09932 586 aa5.99□□□□□ -1.45
TDP1YBR223C YCR101CP25607 182 aa5.99□□□□□ -1.45
TDP1YBR223C PEX4P29340 183 aa5.99□□□□□ -1.45
TDP1YBR223C MRPL4P36517 319 aa5.99□□□□□ -1.45
TDP1YBR223C YBR292CP38357 123 aa5.99□□□□□ -1.45
TDP1YBR223C STS1P38637 319 aa5.99□□□□□ -1.45
TDP1YBR223C POP2P39008 433 aa5.99□□□□□ -1.45
TDP1YBR223C VMA21P41806 77 aa5.99□□□□□ -1.45
TDP1YBR223C HXT14P42833 540 aa5.99□□□□□ -1.45
TDP1YBR223C CGR1P53188 120 aa5.99□□□□□ -1.45
TDP1YBR223C TIM21P53220 239 aa5.99□□□□□ -1.45
TDP1YBR223C PCP1P53259 346 aa5.99□□□□□ -1.45
TDP1YBR223C NUP53Q03790 475 aa5.99□□□□□ -1.45
TDP1YBR223C TSA2Q04120 196 aa5.99□□□□□ -1.45
TDP1YBR223C YMR090WQ04304 227 aaKnown RBP5.99□□□□□ -1.45
TDP1YBR223C YMR253CQ04835 414 aa5.99□□□□□ -1.45
TDP1YBR223C ADH3P07246 375 aaKnown RBP5.98□□□□□ -1.45
TDP1YBR223C SPS4P09937 338 aa5.98□□□□□ -1.45
TDP1YBR223C APA2P22108 325 aa5.98□□□□□ -1.45
TDP1YBR223C VMA3P25515 160 aa5.98□□□□□ -1.45
TDP1YBR223C ERG2P32352 222 aa5.98□□□□□ -1.45
TDP1YBR223C SIP1P32578 815 aa5.98□□□□□ -1.45
Retrieved 100 of 5,963 RNA–protein pairs in 20.7 ms