RNA–Protein interactions for RNA: YBL075C

SSA3, Transcript of ATPase involved in protein folding and the response to stress, yeast

Gene SSA3, Length 1,950 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSA3	YBL075C	YHR214W	P0CX19	203 aa		12.82	□□□□□ -0.36
SSA3	YBL075C	HAP4	P14064	554 aa		12.82	□□□□□ -0.36
SSA3	YBL075C	ARO2	P28777	376 aa	Known RBP	12.82	□□□□□ -0.36
SSA3	YBL075C	YEL073C	P39974	107 aa		12.82	□□□□□ -0.36
SSA3	YBL075C	THG1	P53215	237 aa	Known RBP	12.82	□□□□□ -0.36
SSA3	YBL075C	YPR147C	Q06522	304 aa	Known RBP	12.82	□□□□□ -0.36
SSA3	YBL075C	YCT1	Q12235	531 aa		12.82	□□□□□ -0.36
SSA3	YBL075C	RDL1	Q12305	139 aa	Known RBP	12.82	□□□□□ -0.36
SSA3	YBL075C	ODC2	Q99297	307 aa		12.82	□□□□□ -0.36
SSA3	YBL075C	DPM1	P14020	267 aa	Known RBP	12.81	□□□□□ -0.36
SSA3	YBL075C	ERG4	P25340	473 aa		12.81	□□□□□ -0.36
SSA3	YBL075C	YCR100C	P25606	316 aa		12.81	□□□□□ -0.36
SSA3	YBL075C	ASK10	P48361	1146 aa		12.81	□□□□□ -0.36
SSA3	YBL075C	CSL4	P53859	292 aa	Predicted RBP	12.81	□□□□□ -0.36
SSA3	YBL075C	YML053C	Q04978	212 aa		12.81	□□□□□ -0.36
SSA3	YBL075C	CHO1	P08456	276 aa		12.81	□□□□□ -0.36
SSA3	YBL075C	NHP6A	P11632	93 aa	Known RBP	12.81	□□□□□ -0.36
SSA3	YBL075C	TRR1	P29509	319 aa	Known RBP	12.81	□□□□□ -0.36
SSA3	YBL075C	PMU1	P36069	295 aa		12.81	□□□□□ -0.36
SSA3	YBL075C	TAE1	P38340	232 aa		12.81	□□□□□ -0.36
SSA3	YBL075C	PRE3	P38624	215 aa		12.81	□□□□□ -0.36
SSA3	YBL075C	ATG27	P46989	271 aa		12.81	□□□□□ -0.36
SSA3	YBL075C	AGP1	P25376	633 aa		12.8	□□□□□ -0.36
SSA3	YBL075C	YEA6	P39953	335 aa		12.8	□□□□□ -0.36
SSA3	YBL075C	MIC26	P50087	233 aa		12.8	□□□□□ -0.36
SSA3	YBL075C	MTM1	P53320	366 aa		12.8	□□□□□ -0.36
SSA3	YBL075C	YMR178W	Q03219	274 aa	Known RBP	12.8	□□□□□ -0.36
SSA3	YBL075C	YML018C	Q03730	393 aa		12.8	□□□□□ -0.36
SSA3	YBL075C	LEU9	Q12166	604 aa	Known RBP	12.8	□□□□□ -0.36
SSA3	YBL075C	FRE7	Q12333	620 aa		12.8	□□□□□ -0.36
SSA3	YBL075C	HXT4	P32467	576 aa		12.8	□□□□□ -0.36
SSA3	YBL075C	MGM101	P32787	269 aa	Known RBP	12.8	□□□□□ -0.36
SSA3	YBL075C	YPT53	P36019	220 aa		12.8	□□□□□ -0.36
SSA3	YBL075C	PCL5	P38794	229 aa		12.8	□□□□□ -0.36
SSA3	YBL075C	PEX7	P39108	375 aa		12.8	□□□□□ -0.36
SSA3	YBL075C	CTS2	Q06350	511 aa		12.8	□□□□□ -0.36
SSA3	YBL075C	OSW5	P40219	148 aa		12.79	□□□□□ -0.36
SSA3	YBL075C	RPL34B	P40525	121 aa	Known RBP	12.79	□□□□□ -0.36
SSA3	YBL075C	CDC40	P40968	455 aa	Predicted RBP	12.79	□□□□□ -0.36
SSA3	YBL075C	MTQ2	Q03920	221 aa	Predicted RBP	12.79	□□□□□ -0.36
SSA3	YBL075C	YOR378W	Q08902	515 aa		12.79	□□□□□ -0.36
SSA3	YBL075C	ERV2	Q12284	196 aa		12.79	□□□□□ -0.36
SSA3	YBL075C	ERS1	P17261	260 aa		12.78	□□□□□ -0.36
SSA3	YBL075C	FPR1	P20081	114 aa	Known RBP	12.78	□□□□□ -0.36
SSA3	YBL075C	TRX3	P25372	127 aa		12.78	□□□□□ -0.36
SSA3	YBL075C	FUN19	P28003	413 aa	Predicted RBP	12.78	□□□□□ -0.36
SSA3	YBL075C	FMT1	P32785	401 aa		12.78	□□□□□ -0.36
SSA3	YBL075C	MNL1	P38888	796 aa		12.78	□□□□□ -0.36
SSA3	YBL075C	AGE1	Q04412	482 aa		12.78	□□□□□ -0.36
SSA3	YBL075C	SYM1	Q06563	197 aa		12.78	□□□□□ -0.36
SSA3	YBL075C	YLR030W	Q07967	263 aa		12.78	□□□□□ -0.36
SSA3	YBL075C	TDH3	P00359	332 aa	Known RBP RIP-Chip data	12.78	□□□□□ -0.36	not detected
SSA3	YBL075C	NFS1	P25374	497 aa		12.78	□□□□□ -0.36
SSA3	YBL075C	CBP4	P37267	147 aa		12.78	□□□□□ -0.36
SSA3	YBL075C	YGL204C	P53089	101 aa		12.78	□□□□□ -0.36
SSA3	YBL075C	RML2	P32611	393 aa		12.77	□□□□□ -0.37
SSA3	YBL075C	YEA4	P40004	342 aa		12.77	□□□□□ -0.37
SSA3	YBL075C	SNO2	P53823	222 aa		12.77	□□□□□ -0.37
SSA3	YBL075C	HRD1	Q08109	551 aa		12.77	□□□□□ -0.37
SSA3	YBL075C	RIB4	P50861	169 aa	Predicted RBP	12.76	□□□□□ -0.37
SSA3	YBL075C	CTF19	Q02732	369 aa		12.76	□□□□□ -0.37
SSA3	YBL075C	IRA2	P19158	3079 aa		12.76	□□□□□ -0.37
SSA3	YBL075C	SLM6	P38343	150 aa		12.76	□□□□□ -0.37
SSA3	YBL075C	PFS1	P38872	237 aa		12.76	□□□□□ -0.37
SSA3	YBL075C	FLO5	P38894	1075 aa		12.76	□□□□□ -0.37
SSA3	YBL075C	YEL068C	P39977	110 aa		12.76	□□□□□ -0.37
SSA3	YBL075C	AIR1	P40507	360 aa	Known RBP	12.76	□□□□□ -0.37
SSA3	YBL075C	HST3	P53687	447 aa		12.76	□□□□□ -0.37
SSA3	YBL075C	RCE1	Q03530	315 aa		12.76	□□□□□ -0.37
SSA3	YBL075C	CCE1	Q03702	353 aa		12.76	□□□□□ -0.37
SSA3	YBL075C	HED1	Q03937	162 aa		12.76	□□□□□ -0.37
SSA3	YBL075C	HUT1	Q12520	339 aa		12.76	□□□□□ -0.37
SSA3	YBL075C	RPL14A	P36105	138 aa	Known RBP	12.75	□□□□□ -0.37
SSA3	YBL075C	FIG1	P38224	298 aa		12.75	□□□□□ -0.37
SSA3	YBL075C	RPL14B	P38754	138 aa	Known RBP	12.75	□□□□□ -0.37
SSA3	YBL075C	HSP10	P38910	106 aa		12.75	□□□□□ -0.37
SSA3	YBL075C	YGR126W	P53274	230 aa		12.75	□□□□□ -0.37
SSA3	YBL075C	WIP1	Q2V2P8	89 aa		12.75	□□□□□ -0.37
SSA3	YBL075C	MES1	P00958	751 aa	Known RBP	12.74	□□□□□ -0.37
SSA3	YBL075C	IMG1	P25626	169 aa		12.74	□□□□□ -0.37
SSA3	YBL075C	MIX23	P38162	196 aa		12.74	□□□□□ -0.37
SSA3	YBL075C	SDS24	P38314	527 aa		12.74	□□□□□ -0.37
SSA3	YBL075C	YBR292C	P38357	123 aa		12.74	□□□□□ -0.37
SSA3	YBL075C	HHT1	P61830	136 aa		12.74	□□□□□ -0.37
SSA3	YBL075C	ADH6	Q04894	360 aa	Known RBP	12.74	□□□□□ -0.37
SSA3	YBL075C	Q0182	Q9ZZW1	134 aa		12.74	□□□□□ -0.37
SSA3	YBL075C	ARC40	P38328	384 aa	Known RBP	12.74	□□□□□ -0.37
SSA3	YBL075C	PAC1	P39946	494 aa	Known RBP	12.74	□□□□□ -0.37
SSA3	YBL075C	YJL068C	P40363	299 aa		12.74	□□□□□ -0.37
SSA3	YBL075C	YAR1	P46683	200 aa		12.74	□□□□□ -0.37
SSA3	YBL075C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	12.74	□□□□□ -0.37	not detected
SSA3	YBL075C	NEO1	P40527	1151 aa		12.73	□□□□□ -0.37
SSA3	YBL075C	GPI14	P47088	403 aa	Known RBP	12.73	□□□□□ -0.37
SSA3	YBL075C	YDL129W	Q07555	291 aa		12.73	□□□□□ -0.37
SSA3	YBL075C	LSM2	P38203	95 aa	Known RBP	12.72	□□□□□ -0.37
SSA3	YBL075C	YHL044W	P38727	235 aa		12.72	□□□□□ -0.37
SSA3	YBL075C	DOG1	P38774	246 aa		12.72	□□□□□ -0.37
SSA3	YBL075C	MTO1	P53070	669 aa		12.72	□□□□□ -0.37
SSA3	YBL075C	NRG1	Q03125	231 aa		12.72	□□□□□ -0.37
SSA3	YBL075C	GIM5	Q04493	163 aa		12.72	□□□□□ -0.37

Retrieved 100 of 5,963 RNA–protein pairs in 46.8 ms