RNA–Protein interactions for RNA: YBL041W

PRE7, Transcript of Beta 6 subunit of the 20S proteasome, yeast

Gene PRE7, Length 726 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PRE7	YBL041W	NAT2	P37293	288 aa		4.17	□□□□□ -1.74
PRE7	YBL041W	NVJ1	P38881	321 aa		4.17	□□□□□ -1.74
PRE7	YBL041W	RPS0B	P46654	252 aa	Known RBP	4.17	□□□□□ -1.74
PRE7	YBL041W	APJ1	P53940	528 aa		4.17	□□□□□ -1.74
PRE7	YBL041W	UTP15	Q04305	513 aa	Known RBP	4.17	□□□□□ -1.74
PRE7	YBL041W	YOR029W	Q12243	111 aa		4.17	□□□□□ -1.74
PRE7	YBL041W	YMR105W-A	Q8TGS8	64 aa		4.17	□□□□□ -1.74
PRE7	YBL041W	QCR7	P00128	127 aa		4.16	□□□□□ -1.74
PRE7	YBL041W	PRE4	P30657	266 aa		4.16	□□□□□ -1.74
PRE7	YBL041W	ACH1	P32316	526 aa		4.16	□□□□□ -1.74
PRE7	YBL041W	DAL3	P32459	195 aa		4.16	□□□□□ -1.74
PRE7	YBL041W	ZUO1	P32527	433 aa	Known RBP	4.16	□□□□□ -1.74
PRE7	YBL041W	SNC2	P33328	115 aa		4.16	□□□□□ -1.74
PRE7	YBL041W	TIF3	P34167	436 aa	Known RBP	4.16	□□□□□ -1.74
PRE7	YBL041W	TMA19	P35691	167 aa	Known RBP	4.16	□□□□□ -1.74
PRE7	YBL041W	SFK1	P35735	353 aa		4.16	□□□□□ -1.74
PRE7	YBL041W	MRPL36	P36531	177 aa		4.16	□□□□□ -1.74
PRE7	YBL041W	CDS1	P38221	457 aa		4.16	□□□□□ -1.74
PRE7	YBL041W	LNP1	P38878	278 aa		4.16	□□□□□ -1.74
PRE7	YBL041W	SSN8	P47821	323 aa		4.16	□□□□□ -1.74
PRE7	YBL041W	MRH4	P53166	561 aa		4.16	□□□□□ -1.74
PRE7	YBL041W	YGR054W	P53235	642 aa	Known RBP	4.16	□□□□□ -1.74
PRE7	YBL041W	WSC2	P53832	503 aa		4.16	□□□□□ -1.74
PRE7	YBL041W	YPL108W	Q02872	168 aa	Predicted RBP	4.16	□□□□□ -1.74
PRE7	YBL041W	CAC2	Q04199	468 aa		4.16	□□□□□ -1.74
PRE7	YBL041W	ECM18	Q04623	453 aa		4.16	□□□□□ -1.74
PRE7	YBL041W	NEJ1	Q06148	342 aa		4.16	□□□□□ -1.74
PRE7	YBL041W	HEM25	Q07534	307 aa		4.16	□□□□□ -1.74
PRE7	YBL041W	ORT1	Q12375	292 aa		4.16	□□□□□ -1.74
PRE7	YBL041W	MPD1	Q12404	318 aa	Known RBP	4.16	□□□□□ -1.74
PRE7	YBL041W	HUT1	Q12520	339 aa		4.16	□□□□□ -1.74
PRE7	YBL041W	MET17	P06106	444 aa		4.15	□□□□□ -1.75
PRE7	YBL041W	CDC31	P06704	161 aa	Known RBP	4.15	□□□□□ -1.75
PRE7	YBL041W	ADK1	P07170	222 aa	Known RBP	4.15	□□□□□ -1.75
PRE7	YBL041W	CNE1	P27825	502 aa		4.15	□□□□□ -1.75
PRE7	YBL041W	IMP1	P28627	190 aa		4.15	□□□□□ -1.75
PRE7	YBL041W	PAU2	P32612	120 aa		4.15	□□□□□ -1.75
PRE7	YBL041W	PAM16	P42949	149 aa		4.15	□□□□□ -1.75
PRE7	YBL041W	PIR5	P46999	287 aa		4.15	□□□□□ -1.75
PRE7	YBL041W	MRX5	P47007	382 aa		4.15	□□□□□ -1.75
PRE7	YBL041W	BNA1	P47096	177 aa		4.15	□□□□□ -1.75
PRE7	YBL041W	YJR120W	P47157	116 aa		4.15	□□□□□ -1.75
PRE7	YBL041W	SCW4	P53334	386 aa	Known RBP	4.15	□□□□□ -1.75
PRE7	YBL041W	ADH6	Q04894	360 aa	Known RBP	4.15	□□□□□ -1.75
PRE7	YBL041W	UPS1	Q05776	175 aa		4.15	□□□□□ -1.75
PRE7	YBL041W	LIP2	Q06005	328 aa		4.15	□□□□□ -1.75
PRE7	YBL041W	ARR2	Q06597	130 aa		4.15	□□□□□ -1.75
PRE7	YBL041W	YOR186W	Q08560	144 aa		4.15	□□□□□ -1.75
PRE7	YBL041W	EAF3	Q12432	401 aa		4.15	□□□□□ -1.75
PRE7	YBL041W	RPL25	P04456	142 aa	Known RBP	4.14	□□□□□ -1.75
PRE7	YBL041W	GDH1	P07262	454 aa	Known RBP	4.14	□□□□□ -1.75
PRE7	YBL041W	PEX4	P29340	183 aa		4.14	□□□□□ -1.75
PRE7	YBL041W	VMA6	P32366	345 aa	Known RBP	4.14	□□□□□ -1.75
PRE7	YBL041W	SOR1	P35497	357 aa	Known RBP	4.14	□□□□□ -1.75
PRE7	YBL041W	SWD2	P36104	329 aa	Predicted RBP	4.14	□□□□□ -1.75
PRE7	YBL041W	GOS1	P38736	223 aa		4.14	□□□□□ -1.75
PRE7	YBL041W	AVT6	P40074	448 aa		4.14	□□□□□ -1.75
PRE7	YBL041W	DDI1	P40087	428 aa		4.14	□□□□□ -1.75
PRE7	YBL041W	PDS1	P40316	373 aa	Predicted RBP	4.14	□□□□□ -1.75
PRE7	YBL041W	YAE1	P47118	141 aa	Predicted RBP	4.14	□□□□□ -1.75
PRE7	YBL041W	YGL114W	P53134	725 aa		4.14	□□□□□ -1.75
PRE7	YBL041W	RRP17	Q04031	235 aa	Predicted RBP	4.14	□□□□□ -1.75
PRE7	YBL041W	NMA1	Q06178	401 aa	Known RBP	4.14	□□□□□ -1.75
PRE7	YBL041W	SOR2	Q07786	357 aa		4.14	□□□□□ -1.75
PRE7	YBL041W	SRL1	Q08673	210 aa		4.14	□□□□□ -1.75
PRE7	YBL041W	RBD2	Q12270	262 aa		4.14	□□□□□ -1.75
PRE7	YBL041W	RAX2	Q12465	1220 aa		4.14	□□□□□ -1.75
PRE7	YBL041W	YLR099W-A	Q3E798	87 aa		4.14	□□□□□ -1.75
PRE7	YBL041W	YEL009C-A	A0A023PZF2	135 aa		4.13	□□□□□ -1.75
PRE7	YBL041W	REP2	P03872	296 aa		4.13	□□□□□ -1.75
PRE7	YBL041W	ATP10	P18496	279 aa		4.13	□□□□□ -1.75
PRE7	YBL041W	YCR101C	P25607	182 aa		4.13	□□□□□ -1.75
PRE7	YBL041W	SUA7	P29055	345 aa	Predicted RBP	4.13	□□□□□ -1.75
PRE7	YBL041W	ERG24	P32462	438 aa	Known RBP	4.13	□□□□□ -1.75
PRE7	YBL041W	UMP1	P38293	148 aa		4.13	□□□□□ -1.75
PRE7	YBL041W	PRS2	P38620	318 aa	Known RBP	4.13	□□□□□ -1.75
PRE7	YBL041W	YFL015C	P43578	164 aa		4.13	□□□□□ -1.75
PRE7	YBL041W	OKP1	P53298	406 aa		4.13	□□□□□ -1.75
PRE7	YBL041W	MAK3	Q03503	176 aa		4.13	□□□□□ -1.75
PRE7	YBL041W	YLR283W	Q05867	314 aa		4.13	□□□□□ -1.75
PRE7	YBL041W	ASR1	Q06834	288 aa		4.13	□□□□□ -1.75
PRE7	YBL041W	PET122	P10355	254 aa		4.12	□□□□□ -1.75
PRE7	YBL041W	PET18	P25362	215 aa		4.12	□□□□□ -1.75
PRE7	YBL041W	SHE2	P36068	246 aa	Known RBP RIP-Chip data	4.12	□□□□□ -1.75	not detected
PRE7	YBL041W	PRY2	P36110	329 aa		4.12	□□□□□ -1.75
PRE7	YBL041W	YBR137W	P38276	179 aa		4.12	□□□□□ -1.75
PRE7	YBL041W	CCS1	P40202	249 aa	Known RBP	4.12	□□□□□ -1.75
PRE7	YBL041W	GVP36	P40531	326 aa	Known RBP	4.12	□□□□□ -1.75
PRE7	YBL041W	GNA1	P43577	159 aa	Predicted RBP	4.12	□□□□□ -1.75
PRE7	YBL041W	BNA6	P43619	295 aa		4.12	□□□□□ -1.75
PRE7	YBL041W	DOC1	P53068	250 aa		4.12	□□□□□ -1.75
PRE7	YBL041W	RCF1	Q03713	159 aa		4.12	□□□□□ -1.75
PRE7	YBL041W	GRX3	Q03835	250 aa		4.12	□□□□□ -1.75
PRE7	YBL041W	ATG17	Q06410	417 aa		4.12	□□□□□ -1.75
PRE7	YBL041W	RFM1	Q12192	310 aa		4.12	□□□□□ -1.75
PRE7	YBL041W	ATG40	Q99325	256 aa		4.12	□□□□□ -1.75
PRE7	YBL041W	GCN4	P03069	281 aa		4.11	□□□□□ -1.75
PRE7	YBL041W	RFA3	P26755	122 aa	Known RBP	4.11	□□□□□ -1.75
PRE7	YBL041W	ARO4	P32449	370 aa	Known RBP	4.11	□□□□□ -1.75
PRE7	YBL041W	MTC7	P32633	139 aa		4.11	□□□□□ -1.75

Retrieved 100 of 5,963 RNA–protein pairs in 34.9 ms