RNA–Protein interactions for RNA: ENST00000588762.5

GHDC-209, Transcript of GH3 domain containing, humanhuman

TSL 1 (best)

Gene GHDC, Length 842 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GHDC-209ENST00000588762 PAAF1Q9BRP4 392 aa16.81■□□□□ 0.28
GHDC-209ENST00000588762 MTMR10Q9NXD2 777 aa16.81■□□□□ 0.28
GHDC-209ENST00000588762 LZTS1Q9Y250 596 aa16.81■□□□□ 0.28
GHDC-209ENST00000588762 ATG2AQ2TAZ0 1938 aa16.8■□□□□ 0.28
GHDC-209ENST00000588762 PODXLO00592 558 aa16.8■□□□□ 0.28
GHDC-209ENST00000588762 B3GAT3O94766 335 aa16.8■□□□□ 0.28
GHDC-209ENST00000588762 TNNC2P02585 160 aa16.8■□□□□ 0.28
GHDC-209ENST00000588762 TMEM191BP0C7N4 346 aa16.8■□□□□ 0.28
GHDC-209ENST00000588762 DLATP10515 647 aaKnown RBP16.8■□□□□ 0.28
GHDC-209ENST00000588762 KRT13P13646 458 aa16.8■□□□□ 0.28
GHDC-209ENST00000588762 TNNI1P19237 187 aa16.8■□□□□ 0.28
GHDC-209ENST00000588762 WNT7BP56706 349 aa16.8■□□□□ 0.28
GHDC-209ENST00000588762 STX17P56962 302 aa16.8■□□□□ 0.28
GHDC-209ENST00000588762 BMS1Q14692 1282 aaKnown RBP16.8■□□□□ 0.28
GHDC-209ENST00000588762 UPP1Q16831 310 aa16.8■□□□□ 0.28
GHDC-209ENST00000588762 DUOXA2Q1HG44 320 aa16.8■□□□□ 0.28
GHDC-209ENST00000588762 DPCR1Q3MIW9 517 aa16.8■□□□□ 0.28
GHDC-209ENST00000588762 TTI2Q6NXR4 508 aa16.8■□□□□ 0.28
GHDC-209ENST00000588762 DDX53Q86TM3 631 aaKnown RBP16.8■□□□□ 0.28
GHDC-209ENST00000588762 TMEM173Q86WV6 379 aaPredicted RBP16.8■□□□□ 0.28
GHDC-209ENST00000588762 WDR49Q8IV35 697 aa16.8■□□□□ 0.28
GHDC-209ENST00000588762 EFCAB13Q8IY85 973 aa16.8■□□□□ 0.28
GHDC-209ENST00000588762 BCL7CQ8WUZ0 217 aaPredicted RBP16.8■□□□□ 0.28
GHDC-209ENST00000588762 POF1BQ8WVV4 589 aa16.8■□□□□ 0.28
GHDC-209ENST00000588762 ANKRD36BP1Q96IX9 119 aa16.8■□□□□ 0.28
GHDC-209ENST00000588762 CDX2Q99626 313 aaPredicted RBP16.8■□□□□ 0.28
GHDC-209ENST00000588762 MKNK1Q9BUB5 465 aa16.8■□□□□ 0.28
GHDC-209ENST00000588762 DPP3Q9NY33 737 aa16.8■□□□□ 0.28
GHDC-209ENST00000588762 RWDD2AQ9UIY3 292 aa16.8■□□□□ 0.28
GHDC-209ENST00000588762 ADAM28Q9UKQ2 775 aa16.8■□□□□ 0.28
GHDC-209ENST00000588762 SF3B1O75533 1304 aaKnown RBP eCLIP16.79■□□□□ 0.28
GHDC-209ENST00000588762 TMEM189-UBE2V1I3L0A0 370 aa16.79■□□□□ 0.28
GHDC-209ENST00000588762 TRAPPC3O43617 180 aa16.79■□□□□ 0.28
GHDC-209ENST00000588762 AKAP3O75969 853 aa16.79■□□□□ 0.28
GHDC-209ENST00000588762 LETM1O95202 739 aaPredicted RBP16.79■□□□□ 0.28
GHDC-209ENST00000588762 KIF4AO95239 1232 aa16.79■□□□□ 0.28
GHDC-209ENST00000588762 EPB41P11171 864 aaKnown RBP16.79■□□□□ 0.28
GHDC-209ENST00000588762 IGFBP4P22692 258 aa16.79■□□□□ 0.28
GHDC-209ENST00000588762 LRPAP1P30533 357 aa16.79■□□□□ 0.28
GHDC-209ENST00000588762 INTS8Q75QN2 995 aaKnown RBP16.79■□□□□ 0.28
GHDC-209ENST00000588762 CSGALNACT2Q8N6G5 542 aa16.79■□□□□ 0.28
GHDC-209ENST00000588762 TMC2Q8TDI7 906 aa16.79■□□□□ 0.28
GHDC-209ENST00000588762 HASPINQ8TF76 798 aa16.79■□□□□ 0.28
GHDC-209ENST00000588762 MYLIPQ8WY64 445 aa16.79■□□□□ 0.28
GHDC-209ENST00000588762 MRPL38Q96DV4 380 aaKnown RBP16.79■□□□□ 0.28
GHDC-209ENST00000588762 EEF2KMTQ96G04 330 aa16.79■□□□□ 0.28
GHDC-209ENST00000588762 CEP63Q96MT8 703 aa16.79■□□□□ 0.28
GHDC-209ENST00000588762 CGRRF1Q99675 332 aa16.79■□□□□ 0.28
GHDC-209ENST00000588762 TLR9Q9NR96 1032 aa16.79■□□□□ 0.28
GHDC-209ENST00000588762 INTS13Q9NVM9 706 aa16.79■□□□□ 0.28
GHDC-209ENST00000588762 ANO10Q9NW15 660 aa16.79■□□□□ 0.28
GHDC-209ENST00000588762 MARCH5Q9NX47 278 aa16.79■□□□□ 0.28
GHDC-209ENST00000588762 LMCD1Q9NZU5 365 aa16.79■□□□□ 0.28
GHDC-209ENST00000588762 R3HCC1Q9Y3T6 440 aaKnown RBP16.79■□□□□ 0.28
GHDC-209ENST00000588762 NUB1Q9Y5A7 615 aa16.79■□□□□ 0.28
GHDC-209ENST00000588762 SCN1AP35498 2009 aa16.79■□□□□ 0.28
GHDC-209ENST00000588762 SZT2Q5T011 3432 aa16.79■□□□□ 0.28
GHDC-209ENST00000588762 F8W810 466 aa16.78■□□□□ 0.28
GHDC-209ENST00000588762 SLC16A3O15427 465 aaKnown RBP16.78■□□□□ 0.28
GHDC-209ENST00000588762 LPXNO60711 386 aa16.78■□□□□ 0.28
GHDC-209ENST00000588762 FGFR1OPO95684 399 aaKnown RBP16.78■□□□□ 0.28
GHDC-209ENST00000588762 VAMP7P51809 220 aa16.78■□□□□ 0.28
GHDC-209ENST00000588762 GUCY2FP51841 1108 aa16.78■□□□□ 0.28
GHDC-209ENST00000588762 ELAVL2Q12926 359 aaKnown RBP16.78■□□□□ 0.28
GHDC-209ENST00000588762 NFKBIBQ15653 356 aa16.78■□□□□ 0.28
GHDC-209ENST00000588762 STX1AQ16623 288 aa16.78■□□□□ 0.28
GHDC-209ENST00000588762 TPD52L1Q16890 204 aaPredicted RBP16.78■□□□□ 0.28
GHDC-209ENST00000588762 CT47A1Q5JQC4 288 aaPredicted RBP16.78■□□□□ 0.28
GHDC-209ENST00000588762 PDE12Q6L8Q7 609 aaKnown RBP16.78■□□□□ 0.28
GHDC-209ENST00000588762 FUT10Q6P4F1 479 aa16.78■□□□□ 0.28
GHDC-209ENST00000588762 TMC7Q7Z402 723 aa16.78■□□□□ 0.28
GHDC-209ENST00000588762 ZC3H3Q8IXZ2 948 aaKnown RBP16.78■□□□□ 0.28
GHDC-209ENST00000588762 VPS52Q8N1B4 723 aa16.78■□□□□ 0.28
GHDC-209ENST00000588762 MICAL1Q8TDZ2 1067 aa16.78■□□□□ 0.28
GHDC-209ENST00000588762 PARD3BQ8TEW8 1205 aa16.78■□□□□ 0.28
GHDC-209ENST00000588762 GUCD1Q96NT3 240 aa16.78■□□□□ 0.28
GHDC-209ENST00000588762 DUSP9Q99956 384 aaKnown RBP16.78■□□□□ 0.28
GHDC-209ENST00000588762 ENTPD7Q9NQZ7 604 aa16.78■□□□□ 0.28
GHDC-209ENST00000588762 ITGA11Q9UKX5 1188 aa16.78■□□□□ 0.28
GHDC-209ENST00000588762 CSPG5O95196 566 aa16.77■□□□□ 0.28
GHDC-209ENST00000588762 FOSL2P15408 326 aa16.77■□□□□ 0.28
GHDC-209ENST00000588762 PAX3P23760 479 aa16.77■□□□□ 0.28
GHDC-209ENST00000588762 DNAJB1P25685 340 aa16.77■□□□□ 0.28
GHDC-209ENST00000588762 ERCC5P28715 1186 aaPredicted RBP16.77■□□□□ 0.28
GHDC-209ENST00000588762 AP3M2P53677 418 aa16.77■□□□□ 0.28
GHDC-209ENST00000588762 ENPEPQ07075 957 aa16.77■□□□□ 0.28
GHDC-209ENST00000588762 C9orf57Q5W0N0 161 aa16.77■□□□□ 0.28
GHDC-209ENST00000588762 LMBRD2Q68DH5 695 aaPredicted RBP16.77■□□□□ 0.28
GHDC-209ENST00000588762 KIAA1841Q6NSI8 718 aa16.77■□□□□ 0.28
GHDC-209ENST00000588762 FILIP1Q7Z7B0 1213 aa16.77■□□□□ 0.28
GHDC-209ENST00000588762 OR5B17Q8NGF7 314 aa16.77■□□□□ 0.28
GHDC-209ENST00000588762 POP1Q99575 1024 aaKnown RBP16.77■□□□□ 0.28
GHDC-209ENST00000588762 MTMR12Q9C0I1 747 aa16.77■□□□□ 0.28
GHDC-209ENST00000588762 MYO7AQ13402 2215 aa16.77■□□□□ 0.27
GHDC-209ENST00000588762 PRRC2BQ5JSZ5 2229 aaKnown RBP16.77■□□□□ 0.27
GHDC-209ENST00000588762 PTPRJQ12913 1337 aa16.76■□□□□ 0.27
GHDC-209ENST00000588762 ANO9A1A5B4 782 aa16.76■□□□□ 0.27
GHDC-209ENST00000588762 LRRIQ3A6PVS8 624 aaPredicted RBP16.76■□□□□ 0.27
GHDC-209ENST00000588762 SOD2P04179 222 aa16.76■□□□□ 0.27
GHDC-209ENST00000588762 ITGB3P05106 788 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms