RNA–Protein interactions for RNA: ENST00000490262.1

SREBF2-207, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 2

Gene SREBF2, Length 450 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-207ENST00000490262 MYH15Q9Y2K3 1946 aa12.93□□□□□ -0.34
SREBF2-207ENST00000490262 PDCD11Q14690 1871 aaKnown RBP12.93□□□□□ -0.34
SREBF2-207ENST00000490262 CFAP54Q96N23 3096 aa12.92□□□□□ -0.34
SREBF2-207ENST00000490262 NPHP3-ACAD11A0A0J9YXS1 232 aa12.92□□□□□ -0.34
SREBF2-207ENST00000490262 SYN3O14994 580 aa12.92□□□□□ -0.34
SREBF2-207ENST00000490262 RFX1P22670 979 aa12.92□□□□□ -0.34
SREBF2-207ENST00000490262 MCM2P49736 904 aa12.92□□□□□ -0.34
SREBF2-207ENST00000490262 ROR1Q01973 937 aa12.92□□□□□ -0.34
SREBF2-207ENST00000490262 NOLC1Q14978 699 aaKnown RBP eCLIP12.92□□□□□ -0.34
SREBF2-207ENST00000490262 SLC10A6Q3KNW5 377 aa12.92□□□□□ -0.34
SREBF2-207ENST00000490262 TMEM119Q4V9L6 283 aa12.92□□□□□ -0.34
SREBF2-207ENST00000490262 PABPC1LQ4VXU2 614 aaKnown RBP12.92□□□□□ -0.34
SREBF2-207ENST00000490262 SEZ6Q53EL9 994 aa12.92□□□□□ -0.34
SREBF2-207ENST00000490262 VARS2Q5ST30 1063 aaKnown RBP12.92□□□□□ -0.34
SREBF2-207ENST00000490262 SLC8B1Q6J4K2 584 aa12.92□□□□□ -0.34
SREBF2-207ENST00000490262 ZPBP2Q6X784 338 aa12.92□□□□□ -0.34
SREBF2-207ENST00000490262 ZNF461Q8TAF7 563 aa12.92□□□□□ -0.34
SREBF2-207ENST00000490262 ITFG1Q8TB96 612 aa12.92□□□□□ -0.34
SREBF2-207ENST00000490262 TBC1D17Q9HA65 648 aa12.92□□□□□ -0.34
SREBF2-207ENST00000490262 UPF2Q9HAU5 1272 aaKnown RBP12.92□□□□□ -0.34
SREBF2-207ENST00000490262 ARHGEF3Q9NR81 526 aa12.92□□□□□ -0.34
SREBF2-207ENST00000490262 KCNH3Q9ULD8 1083 aa12.92□□□□□ -0.34
SREBF2-207ENST00000490262 SMC3Q9UQE7 1217 aa12.92□□□□□ -0.34
SREBF2-207ENST00000490262 NUB1Q9Y5A7 615 aa12.92□□□□□ -0.34
SREBF2-207ENST00000490262 H7C4K7 107 aa12.91□□□□□ -0.34
SREBF2-207ENST00000490262 CLDN3O15551 220 aa12.91□□□□□ -0.34
SREBF2-207ENST00000490262 SLC26A4O43511 780 aa12.91□□□□□ -0.34
SREBF2-207ENST00000490262 TBC1D4O60343 1298 aa12.91□□□□□ -0.34
SREBF2-207ENST00000490262 ABLIM3O94929 683 aa12.91□□□□□ -0.34
SREBF2-207ENST00000490262 NCKAP1LP55160 1127 aa12.91□□□□□ -0.34
SREBF2-207ENST00000490262 GPC5P78333 572 aa12.91□□□□□ -0.34
SREBF2-207ENST00000490262 CACNB1Q02641 598 aaPredicted RBP12.91□□□□□ -0.34
SREBF2-207ENST00000490262 MCL1Q07820 350 aa12.91□□□□□ -0.34
SREBF2-207ENST00000490262 MRPL58Q14197 206 aaKnown RBP12.91□□□□□ -0.34
SREBF2-207ENST00000490262 ANGPT1Q15389 498 aa12.91□□□□□ -0.34
SREBF2-207ENST00000490262 ARSHQ5FYA8 562 aa12.91□□□□□ -0.34
SREBF2-207ENST00000490262 LARP1BQ659C4 914 aaKnown RBP12.91□□□□□ -0.34
SREBF2-207ENST00000490262 PHLDB3Q6NSJ2 640 aa12.91□□□□□ -0.34
SREBF2-207ENST00000490262 MTSS1LQ765P7 747 aa12.91□□□□□ -0.34
SREBF2-207ENST00000490262 FRMD5Q7Z6J6 570 aa12.91□□□□□ -0.34
SREBF2-207ENST00000490262 AK8Q96MA6 479 aa12.91□□□□□ -0.34
SREBF2-207ENST00000490262 HAPLN2Q9GZV7 340 aa12.91□□□□□ -0.34
SREBF2-207ENST00000490262 LARSQ9P2J5 1176 aaKnown RBP12.91□□□□□ -0.34
SREBF2-207ENST00000490262 ARHGEF37A1IGU5 675 aa12.9□□□□□ -0.34
SREBF2-207ENST00000490262 WDR27A2RRH5 827 aa12.9□□□□□ -0.34
SREBF2-207ENST00000490262 PRR23AA6NEV1 266 aa12.9□□□□□ -0.34
SREBF2-207ENST00000490262 H0YCG3 227 aa12.9□□□□□ -0.34
SREBF2-207ENST00000490262 PRRG1O14668 218 aa12.9□□□□□ -0.34
SREBF2-207ENST00000490262 LRG1P02750 347 aa12.9□□□□□ -0.34
SREBF2-207ENST00000490262 ATF2P15336 505 aa12.9□□□□□ -0.34
SREBF2-207ENST00000490262 PTPN2P17706 415 aa12.9□□□□□ -0.34
SREBF2-207ENST00000490262 ELF1P32519 619 aa12.9□□□□□ -0.34
SREBF2-207ENST00000490262 UBA7P41226 1012 aa12.9□□□□□ -0.34
SREBF2-207ENST00000490262 MATR3P43243 847 aaKnown RBP eCLIP12.9□□□□□ -0.34
SREBF2-207ENST00000490262 ARPP19P56211 112 aa12.9□□□□□ -0.34
SREBF2-207ENST00000490262 ASCL5Q7RTU5 278 aa12.9□□□□□ -0.34
SREBF2-207ENST00000490262 HAUS6Q7Z4H7 955 aa12.9□□□□□ -0.34
SREBF2-207ENST00000490262 NPAS3Q8IXF0 933 aa12.9□□□□□ -0.34
SREBF2-207ENST00000490262 KCNN1Q92952 543 aa12.9□□□□□ -0.34
SREBF2-207ENST00000490262 CALML4Q96GE6 196 aa12.9□□□□□ -0.34
SREBF2-207ENST00000490262 SUSD3Q96L08 255 aa12.9□□□□□ -0.34
SREBF2-207ENST00000490262 REEP2Q9BRK0 252 aa12.9□□□□□ -0.34
SREBF2-207ENST00000490262 PLEKHA5Q9HAU0 1116 aa12.9□□□□□ -0.34
SREBF2-207ENST00000490262 TUBGCP4Q9UGJ1 667 aa12.9□□□□□ -0.34
SREBF2-207ENST00000490262 FBXL5Q9UKA1 691 aa12.9□□□□□ -0.34
SREBF2-207ENST00000490262 ODF2LQ9ULJ1 636 aa12.9□□□□□ -0.34
SREBF2-207ENST00000490262 MRPS23Q9Y3D9 190 aaKnown RBP12.9□□□□□ -0.34
SREBF2-207ENST00000490262 SIT1Q9Y3P8 196 aa12.9□□□□□ -0.34
SREBF2-207ENST00000490262 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.9□□□□□ -0.34
SREBF2-207ENST00000490262 PTPRZ1P23471 2315 aaPredicted RBP12.89□□□□□ -0.35
SREBF2-207ENST00000490262 RHOP08100 348 aa12.89□□□□□ -0.35
SREBF2-207ENST00000490262 CLTAP09496 248 aa12.89□□□□□ -0.35
SREBF2-207ENST00000490262 CXCL8P10145 99 aa12.89□□□□□ -0.35
SREBF2-207ENST00000490262 MCM4P33991 863 aa12.89□□□□□ -0.35
SREBF2-207ENST00000490262 STARD6P59095 220 aa12.89□□□□□ -0.35
SREBF2-207ENST00000490262 SPAG1Q07617 926 aa12.89□□□□□ -0.35
SREBF2-207ENST00000490262 DHX8Q14562 1220 aaKnown RBP12.89□□□□□ -0.35
SREBF2-207ENST00000490262 CTXN3Q4LDR2 81 aa12.89□□□□□ -0.35
SREBF2-207ENST00000490262 SPECC1Q5M775 1068 aa12.89□□□□□ -0.35
SREBF2-207ENST00000490262 TPGS2Q68CL5 300 aa12.89□□□□□ -0.35
SREBF2-207ENST00000490262 GPBP1Q86WP2 473 aa12.89□□□□□ -0.35
SREBF2-207ENST00000490262 TCEAL8Q8IYN2 117 aa12.89□□□□□ -0.35
SREBF2-207ENST00000490262 APPL2Q8NEU8 664 aa12.89□□□□□ -0.35
SREBF2-207ENST00000490262 LRRC15Q8TF66 581 aa12.89□□□□□ -0.35
SREBF2-207ENST00000490262 ING5Q8WYH8 240 aa12.89□□□□□ -0.35
SREBF2-207ENST00000490262 DDX12PQ92771 950 aa12.89□□□□□ -0.35
SREBF2-207ENST00000490262 NKD2Q969F2 451 aaPredicted RBP12.89□□□□□ -0.35
SREBF2-207ENST00000490262 MCRS1Q96EZ8 462 aa12.89□□□□□ -0.35
SREBF2-207ENST00000490262 BICD1Q96G01 975 aa12.89□□□□□ -0.35
SREBF2-207ENST00000490262 SHDQ96IW2 340 aa12.89□□□□□ -0.35
SREBF2-207ENST00000490262 TBC1D32Q96NH3 1257 aa12.89□□□□□ -0.35
SREBF2-207ENST00000490262 KXD1Q9BQD3 176 aa12.89□□□□□ -0.35
SREBF2-207ENST00000490262 CYP4F11Q9HBI6 524 aa12.89□□□□□ -0.35
SREBF2-207ENST00000490262 AVENQ9NQS1 362 aaPredicted RBP12.89□□□□□ -0.35
SREBF2-207ENST00000490262 BLOC1S4Q9NUP1 217 aa12.89□□□□□ -0.35
SREBF2-207ENST00000490262 DMDP11532 3685 aa12.89□□□□□ -0.35
SREBF2-207ENST00000490262 RIF1Q5UIP0 2472 aaKnown RBP12.88□□□□□ -0.35
SREBF2-207ENST00000490262 TTC26A0AVF1 554 aa12.88□□□□□ -0.35
SREBF2-207ENST00000490262 HNRNPDLO14979 420 aaKnown RBP12.88□□□□□ -0.35
SREBF2-207ENST00000490262 FAM13AO94988 1023 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms