RNA–Protein interactions for RNA: snR11

snR11, Transcript of H/ACA box small nucleolar RNA (snoRNA), yeast

Gene snR11, Length 258 nt, Biotype snoRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
snR11	snR11	SNO1	Q03144	224 aa		2.62	□□□□□ -1.99
snR11	snR11	YML096W	Q04489	525 aa		2.62	□□□□□ -1.99
snR11	snR11	ATG5	Q12380	294 aa		2.62	□□□□□ -1.99
snR11	snR11	TRM10	Q12400	293 aa		2.62	□□□□□ -1.99
snR11	snR11	MET2	P08465	486 aa		2.61	□□□□□ -1.99
snR11	snR11	EFM1	P38732	585 aa		2.61	□□□□□ -1.99
snR11	snR11	TRM5	P38793	499 aa		2.61	□□□□□ -1.99
snR11	snR11	POG1	P40473	351 aa		2.61	□□□□□ -1.99
snR11	snR11	UFE1	P41834	346 aa		2.61	□□□□□ -1.99
snR11	snR11	IRC18	P47056	224 aa		2.61	□□□□□ -1.99
snR11	snR11	MRH4	P53166	561 aa		2.61	□□□□□ -1.99
snR11	snR11	HST4	P53688	370 aa		2.61	□□□□□ -1.99
snR11	snR11	PDR17	P53844	350 aa		2.61	□□□□□ -1.99
snR11	snR11	AAH1	P53909	347 aa		2.61	□□□□□ -1.99
snR11	snR11	DXO1	Q06349	442 aa		2.61	□□□□□ -1.99
snR11	snR11	RRP40	Q08285	240 aa	Known RBP	2.61	□□□□□ -1.99
snR11	snR11	USB1	Q12208	290 aa	Known RBP	2.61	□□□□□ -1.99
snR11	snR11	YPR011C	Q12251	326 aa		2.61	□□□□□ -1.99
snR11	snR11	SWI1	P09547	1314 aa		2.61	□□□□□ -1.99
snR11	snR11	FBA1	P14540	359 aa	Known RBP	2.6	□□□□□ -1.99
snR11	snR11	COX10	P21592	462 aa		2.6	□□□□□ -1.99
snR11	snR11	TRR2	P38816	342 aa		2.6	□□□□□ -1.99
snR11	snR11	PEX17	P40155	199 aa		2.6	□□□□□ -1.99
snR11	snR11	YMR144W	P40214	342 aa	Known RBP	2.6	□□□□□ -1.99
snR11	snR11	YKE4	P40544	346 aa		2.6	□□□□□ -1.99
snR11	snR11	MRPL49	P40858	161 aa	Predicted RBP	2.6	□□□□□ -1.99
snR11	snR11	YLR179C	Q06252	201 aa	Known RBP	2.6	□□□□□ -1.99
snR11	snR11	DFM1	Q12743	341 aa	Known RBP	2.6	□□□□□ -1.99
snR11	snR11	YBL112C	Q3E7Y4	105 aa		2.6	□□□□□ -1.99
snR11	snR11	YAK1	P14680	807 aa		2.59	□□□□□ -1.99
snR11	snR11	CPT1	P17898	393 aa		2.59	□□□□□ -1.99
snR11	snR11	VPH2	P32341	215 aa		2.59	□□□□□ -1.99
snR11	snR11	CSG2	P35206	410 aa		2.59	□□□□□ -1.99
snR11	snR11	MRPL39	P36533	70 aa		2.59	□□□□□ -1.99
snR11	snR11	SYS1	P41544	203 aa		2.59	□□□□□ -1.99
snR11	snR11	BXI1	P48558	297 aa		2.59	□□□□□ -1.99
snR11	snR11	YGL118C	P53132	145 aa		2.59	□□□□□ -1.99
snR11	snR11	MMS2	P53152	137 aa		2.59	□□□□□ -1.99
snR11	snR11	SWT21	P53873	357 aa	Predicted RBP	2.59	□□□□□ -1.99
snR11	snR11	PRM15	Q03262	622 aa		2.59	□□□□□ -1.99
snR11	snR11	EMI1	Q04406	187 aa		2.59	□□□□□ -1.99
snR11	snR11	MRX8	Q05473	314 aa		2.59	□□□□□ -1.99
snR11	snR11	YDL144C	Q07589	356 aa		2.59	□□□□□ -1.99
snR11	snR11	TIM22	Q12328	207 aa		2.59	□□□□□ -1.99
snR11	snR11	YBL008W-A	Q3E821	79 aa		2.59	□□□□□ -1.99
snR11	snR11	FLO11	P08640	1367 aa		2.59	□□□□□ -2
snR11	snR11	CKA2	P19454	339 aa		2.58	□□□□□ -2
snR11	snR11	ERG2	P32352	222 aa		2.58	□□□□□ -2
snR11	snR11	PHO89	P38361	574 aa		2.58	□□□□□ -2
snR11	snR11	SRP14	P38985	146 aa		2.58	□□□□□ -2
snR11	snR11	EDC2	P40023	145 aa	Predicted RBP	2.58	□□□□□ -2
snR11	snR11	AVT6	P40074	448 aa		2.58	□□□□□ -2
snR11	snR11	SLX9	P53251	210 aa	Predicted RBP	2.58	□□□□□ -2
snR11	snR11	YNL140C	P53910	189 aa		2.58	□□□□□ -2
snR11	snR11	YPR195C	Q06594	109 aa		2.58	□□□□□ -2
snR11	snR11	YNG1	Q08465	219 aa		2.58	□□□□□ -2
snR11	snR11	PUT1	P09368	476 aa		2.57	□□□□□ -2
snR11	snR11	GCN3	P14741	305 aa		2.57	□□□□□ -2
snR11	snR11	UBC6	P33296	250 aa	Predicted RBP	2.57	□□□□□ -2
snR11	snR11	YKR041W	P36134	250 aa		2.57	□□□□□ -2
snR11	snR11	MRPL28	P36527	147 aa		2.57	□□□□□ -2
snR11	snR11	YJL028W	P47062	111 aa		2.57	□□□□□ -2
snR11	snR11	YJR141W	P47172	347 aa	Predicted RBP	2.57	□□□□□ -2
snR11	snR11	IGO1	P53897	168 aa		2.57	□□□□□ -2
snR11	snR11	OSH6	Q02201	448 aa		2.57	□□□□□ -2
snR11	snR11	GRX8	Q05926	109 aa		2.57	□□□□□ -2
snR11	snR11	SYC1	Q08553	188 aa	Predicted RBP	2.57	□□□□□ -2
snR11	snR11	GCY1	P14065	312 aa	Known RBP RIP-Chip data	2.56	□□□□□ -2	not detected
snR11	snR11	PRE7	P23724	241 aa	Known RBP	2.56	□□□□□ -2
snR11	snR11	VPS51	P36116	164 aa		2.56	□□□□□ -2
snR11	snR11	ECM13	P38195	257 aa		2.56	□□□□□ -2
snR11	snR11	ECM33	P38248	429 aa	Known RBP	2.56	□□□□□ -2
snR11	snR11	ASP1	P38986	381 aa	Predicted RBP	2.56	□□□□□ -2
snR11	snR11	BDH1	P39714	382 aa		2.56	□□□□□ -2
snR11	snR11	SPO73	P40031	143 aa		2.56	□□□□□ -2
snR11	snR11	YIR035C	P40579	254 aa		2.56	□□□□□ -2
snR11	snR11	YJL016W	P47072	561 aa		2.56	□□□□□ -2
snR11	snR11	UFD1	P53044	361 aa		2.56	□□□□□ -2
snR11	snR11	GTR2	P53290	341 aa		2.56	□□□□□ -2
snR11	snR11	ERV29	P53337	310 aa		2.56	□□□□□ -2
snR11	snR11	NRK1	P53915	240 aa		2.56	□□□□□ -2
snR11	snR11	YMR279C	Q03263	540 aa		2.56	□□□□□ -2
snR11	snR11	GOT1	Q03554	138 aa		2.56	□□□□□ -2
snR11	snR11	ARO80	Q04052	950 aa		2.56	□□□□□ -2
snR11	snR11	YOL019W	Q08157	551 aa		2.56	□□□□□ -2
snR11	snR11	AGC1	Q12482	902 aa		2.56	□□□□□ -2
snR11	snR11	DRS2	P39524	1355 aa		2.56	□□□□□ -2
snR11	snR11	CAT5	P41735	233 aa		2.55	□□□□□ -2
snR11	snR11	YJR056C	P47115	236 aa		2.55	□□□□□ -2
snR11	snR11	CAX4	P53223	239 aa		2.55	□□□□□ -2
snR11	snR11	YLR460C	P54007	376 aa		2.55	□□□□□ -2
snR11	snR11	SMD1	Q02260	146 aa	Predicted RBP	2.55	□□□□□ -2
snR11	snR11	YDR248C	Q03786	193 aa		2.55	□□□□□ -2
snR11	snR11	YDR124W	Q04608	324 aa		2.55	□□□□□ -2
snR11	snR11	NOC4	Q06512	552 aa	Predicted RBP	2.55	□□□□□ -2
snR11	snR11	YOL160W	Q08321	113 aa		2.55	□□□□□ -2
snR11	snR11	YHR214C-E	Q8TGK0	99 aa		2.55	□□□□□ -2
snR11	snR11	MRS1	P07266	363 aa		2.54	□□□□□ -2
snR11	snR11	SEC4	P07560	215 aa	Known RBP	2.54	□□□□□ -2
snR11	snR11	ZWF1	P11412	505 aa	Known RBP	2.54	□□□□□ -2

Retrieved 100 of 5,963 RNA–protein pairs in 20 ms