RNA–Protein interactions for RNA: YPR056W

TFB4, Transcript of Subunit of TFIIH complex, yeast

Gene TFB4, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TFB4	YPR056W	FLC3	P53121	802 aa		5.1	□□□□□ -1.59
TFB4	YPR056W	YNL234W	P53857	426 aa		5.1	□□□□□ -1.59
TFB4	YPR056W	TIM8	P57744	87 aa		5.1	□□□□□ -1.59
TFB4	YPR056W	SDH7	Q04401	133 aa		5.1	□□□□□ -1.59
TFB4	YPR056W	LIP2	Q06005	328 aa		5.1	□□□□□ -1.59
TFB4	YPR056W	YOR304C-A	O14468	76 aa		5.09	□□□□□ -1.59
TFB4	YPR056W	URE2	P23202	354 aa	Known RBP	5.09	□□□□□ -1.59
TFB4	YPR056W	TFC1	P32367	649 aa		5.09	□□□□□ -1.59
TFB4	YPR056W	GLC7	P32598	312 aa	Known RBP	5.09	□□□□□ -1.59
TFB4	YPR056W	APS1	P35181	156 aa		5.09	□□□□□ -1.59
TFB4	YPR056W	SFK1	P35735	353 aa		5.09	□□□□□ -1.59
TFB4	YPR056W	TVP38	P36164	337 aa		5.09	□□□□□ -1.59
TFB4	YPR056W	YBR062C	P38239	180 aa		5.09	□□□□□ -1.59
TFB4	YPR056W	DOG2	P38773	246 aa		5.09	□□□□□ -1.59
TFB4	YPR056W	DOG1	P38774	246 aa		5.09	□□□□□ -1.59
TFB4	YPR056W	RGI1	P40043	161 aa	Predicted RBP	5.09	□□□□□ -1.59
TFB4	YPR056W	PAN6	P40459	309 aa		5.09	□□□□□ -1.59
TFB4	YPR056W	YFL064C	P43540	174 aa		5.09	□□□□□ -1.59
TFB4	YPR056W	GPI14	P47088	403 aa	Known RBP	5.09	□□□□□ -1.59
TFB4	YPR056W	AVT4	P50944	713 aa		5.09	□□□□□ -1.59
TFB4	YPR056W	HST4	P53688	370 aa		5.09	□□□□□ -1.59
TFB4	YPR056W	NRM1	P53718	249 aa		5.09	□□□□□ -1.59
TFB4	YPR056W	PET191	Q02772	108 aa		5.09	□□□□□ -1.59
TFB4	YPR056W	ELP3	Q02908	557 aa	Known RBP	5.09	□□□□□ -1.59
TFB4	YPR056W	RUB1	Q03919	77 aa		5.09	□□□□□ -1.59
TFB4	YPR056W	LOA1	Q06508	300 aa		5.09	□□□□□ -1.59
TFB4	YPR056W	LDB18	Q07887	179 aa		5.09	□□□□□ -1.59
TFB4	YPR056W	FDH1	Q08911	376 aa		5.09	□□□□□ -1.59
TFB4	YPR056W	YPR202W	Q08993	238 aa		5.09	□□□□□ -1.59
TFB4	YPR056W	RPL23A	P0CX41	137 aa	Known RBP	5.08	□□□□□ -1.6
TFB4	YPR056W	RPL23B	P0CX42	137 aa	Known RBP	5.08	□□□□□ -1.6
TFB4	YPR056W	SCL1	P21243	252 aa	Known RBP	5.08	□□□□□ -1.6
TFB4	YPR056W	MRPL20	P22354	195 aa	Predicted RBP	5.08	□□□□□ -1.6
TFB4	YPR056W	BUD23	P25627	275 aa	Predicted RBP	5.08	□□□□□ -1.6
TFB4	YPR056W	YCR090C	P25654	182 aa	Known RBP	5.08	□□□□□ -1.6
TFB4	YPR056W	PHA2	P32452	334 aa		5.08	□□□□□ -1.6
TFB4	YPR056W	FCY21	P40039	528 aa		5.08	□□□□□ -1.6
TFB4	YPR056W	HAC1	P41546	238 aa		5.08	□□□□□ -1.6
TFB4	YPR056W	FAR7	P43592	221 aa		5.08	□□□□□ -1.6
TFB4	YPR056W	SUR7	P54003	302 aa		5.08	□□□□□ -1.6
TFB4	YPR056W	DID2	P69771	204 aa		5.08	□□□□□ -1.6
TFB4	YPR056W	YDR278C	Q05612	105 aa		5.08	□□□□□ -1.6
TFB4	YPR056W	SUE1	Q06524	206 aa		5.08	□□□□□ -1.6
TFB4	YPR056W	RRG7	Q08774	242 aa	Predicted RBP	5.08	□□□□□ -1.6
TFB4	YPR056W	FYV7	Q12247	151 aa		5.08	□□□□□ -1.6
TFB4	YPR056W	PBI2	P0CT04	75 aa	Known RBP	5.07	□□□□□ -1.6
TFB4	YPR056W	ATG22	P25568	528 aa		5.07	□□□□□ -1.6
TFB4	YPR056W	PEX34	P25584	144 aa		5.07	□□□□□ -1.6
TFB4	YPR056W	PRY2	P36110	329 aa		5.07	□□□□□ -1.6
TFB4	YPR056W	POP4	P38336	279 aa		5.07	□□□□□ -1.6
TFB4	YPR056W	YHI9	P38765	294 aa		5.07	□□□□□ -1.6
TFB4	YPR056W	COX14	P39103	70 aa		5.07	□□□□□ -1.6
TFB4	YPR056W	PEX22	P39718	180 aa		5.07	□□□□□ -1.6
TFB4	YPR056W	YGL082W	P53155	381 aa		5.07	□□□□□ -1.6
TFB4	YPR056W	YMR181C	Q03231	154 aa		5.07	□□□□□ -1.6
TFB4	YPR056W	HPT1	Q04178	221 aa	Known RBP	5.07	□□□□□ -1.6
TFB4	YPR056W	PRP11	Q07350	266 aa	Predicted RBP	5.07	□□□□□ -1.6
TFB4	YPR056W	SNX3	Q08826	162 aa	Known RBP	5.07	□□□□□ -1.6
TFB4	YPR056W	BSC1	Q12140	328 aa		5.07	□□□□□ -1.6
TFB4	YPR056W	YIR021W-A	Q3E739	70 aa		5.07	□□□□□ -1.6
TFB4	YPR056W	YPL229W	Q99395	206 aa		5.07	□□□□□ -1.6
TFB4	YPR056W	NUP157	P40064	1391 aa	Known RBP	5.06	□□□□□ -1.6
TFB4	YPR056W	YMR316C-A	I2HB70	103 aa		5.06	□□□□□ -1.6
TFB4	YPR056W	HEM4	P06174	275 aa		5.06	□□□□□ -1.6
TFB4	YPR056W	RPS14A	P06367	137 aa	Known RBP	5.06	□□□□□ -1.6
TFB4	YPR056W	ATG15	P25641	520 aa		5.06	□□□□□ -1.6
TFB4	YPR056W	AHC2	P25649	128 aa		5.06	□□□□□ -1.6
TFB4	YPR056W	ERG24	P32462	438 aa	Known RBP	5.06	□□□□□ -1.6
TFB4	YPR056W	TRS65	P32893	560 aa		5.06	□□□□□ -1.6
TFB4	YPR056W	YHL049C	P38722	271 aa		5.06	□□□□□ -1.6
TFB4	YPR056W	TRR2	P38816	342 aa		5.06	□□□□□ -1.6
TFB4	YPR056W	RPS14B	P39516	138 aa	Known RBP	5.06	□□□□□ -1.6
TFB4	YPR056W	HEM14	P40012	539 aa		5.06	□□□□□ -1.6
TFB4	YPR056W	PEX17	P40155	199 aa		5.06	□□□□□ -1.6
TFB4	YPR056W	GLC8	P41818	229 aa		5.06	□□□□□ -1.6
TFB4	YPR056W	RRT5	P43607	289 aa		5.06	□□□□□ -1.6
TFB4	YPR056W	SCS3	P53012	380 aa		5.06	□□□□□ -1.6
TFB4	YPR056W	LSM7	P53905	115 aa	Known RBP	5.06	□□□□□ -1.6
TFB4	YPR056W	CRZ1	P53968	678 aa		5.06	□□□□□ -1.6
TFB4	YPR056W	CRC1	Q12289	327 aa		5.06	□□□□□ -1.6
TFB4	YPR056W	PIS1	P06197	220 aa	Known RBP	5.05	□□□□□ -1.6
TFB4	YPR056W	SEC4	P07560	215 aa	Known RBP	5.05	□□□□□ -1.6
TFB4	YPR056W	SNF4	P12904	322 aa		5.05	□□□□□ -1.6
TFB4	YPR056W	ASK1	P35734	292 aa		5.05	□□□□□ -1.6
TFB4	YPR056W	ARN2	P38724	620 aa		5.05	□□□□□ -1.6
TFB4	YPR056W	MEP2	P41948	499 aa		5.05	□□□□□ -1.6
TFB4	YPR056W	VPS25	P47142	202 aa		5.05	□□□□□ -1.6
TFB4	YPR056W	YGR018C	P53211	109 aa		5.05	□□□□□ -1.6
TFB4	YPR056W	YNL046W	P53956	172 aa		5.05	□□□□□ -1.6
TFB4	YPR056W	SDC1	Q03323	175 aa		5.05	□□□□□ -1.6
TFB4	YPR056W	FMN1	Q03778	218 aa		5.05	□□□□□ -1.6
TFB4	YPR056W	SHH4	Q06236	168 aa		5.05	□□□□□ -1.6
TFB4	YPR056W	YOL160W	Q08321	113 aa		5.05	□□□□□ -1.6
TFB4	YPR056W	MHP1	P43638	1398 aa		5.04	□□□□□ -1.6
TFB4	YPR056W	RPL2A	P0CX45	254 aa	Known RBP	5.04	□□□□□ -1.6
TFB4	YPR056W	RPL2B	P0CX46	254 aa	Known RBP	5.04	□□□□□ -1.6
TFB4	YPR056W	ERD2	P18414	219 aa		5.04	□□□□□ -1.6
TFB4	YPR056W	PMU1	P36069	295 aa		5.04	□□□□□ -1.6
TFB4	YPR056W	MRPL24	P36525	258 aa	Predicted RBP	5.04	□□□□□ -1.6
TFB4	YPR056W	MRPL17	P36528	281 aa		5.04	□□□□□ -1.6

Retrieved 100 of 5,963 RNA–protein pairs in 120.2 ms