RNA–Protein interactions for RNA: YMR223W

UBP8, Transcript of Ubiquitin-specific protease component of the SAGA acetylation complex, yeastyeast

Gene UBP8, Length 1,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP8YMR223W YMR279CQ03263 540 aa2.68□□□□□ -1.98
UBP8YMR223W SCS7Q03529 384 aa2.68□□□□□ -1.98
UBP8YMR223W YMD8Q03697 442 aa2.68□□□□□ -1.98
UBP8YMR223W UTP15Q04305 513 aaKnown RBP2.68□□□□□ -1.98
UBP8YMR223W YPR098CQ06089 161 aa2.68□□□□□ -1.98
UBP8YMR223W NEJ1Q06148 342 aa2.68□□□□□ -1.98
UBP8YMR223W SLM3Q12093 417 aa2.68□□□□□ -1.98
UBP8YMR223W RAX2Q12465 1220 aa2.68□□□□□ -1.98
UBP8YMR223W YPR064WQ12492 139 aa2.68□□□□□ -1.98
UBP8YMR223W EFG1Q3E705 233 aaKnown RBP2.68□□□□□ -1.98
UBP8YMR223W YPL229WQ99395 206 aa2.68□□□□□ -1.98
UBP8YMR223W STH1P32597 1359 aa2.67□□□□□ -1.98
UBP8YMR223W CCH1P50077 2039 aa2.67□□□□□ -1.98
UBP8YMR223W COX5AP00424 153 aa2.67□□□□□ -1.98
UBP8YMR223W CDC28P00546 298 aaKnown RBP2.67□□□□□ -1.98
UBP8YMR223W MRS1P07266 363 aa2.67□□□□□ -1.98
UBP8YMR223W EPT1P22140 391 aa2.67□□□□□ -1.98
UBP8YMR223W YCR090CP25654 182 aaKnown RBP2.67□□□□□ -1.98
UBP8YMR223W CSE2P33308 149 aa2.67□□□□□ -1.98
UBP8YMR223W SFK1P35735 353 aa2.67□□□□□ -1.98
UBP8YMR223W YHR127WP38833 243 aaKnown RBP2.67□□□□□ -1.98
UBP8YMR223W NVJ1P38881 321 aa2.67□□□□□ -1.98
UBP8YMR223W PET8P38921 284 aa2.67□□□□□ -1.98
UBP8YMR223W RRG9P40156 214 aa2.67□□□□□ -1.98
UBP8YMR223W HCH1P53834 153 aa2.67□□□□□ -1.98
UBP8YMR223W PEX30Q06169 523 aa2.67□□□□□ -1.98
UBP8YMR223W YOL024WQ08172 172 aa2.67□□□□□ -1.98
UBP8YMR223W DAS2Q12084 232 aa2.67□□□□□ -1.98
UBP8YMR223W RFM1Q12192 310 aa2.67□□□□□ -1.98
UBP8YMR223W YGK3Q12222 375 aaPredicted RBP2.67□□□□□ -1.98
UBP8YMR223W MCT1Q12283 360 aa2.67□□□□□ -1.98
UBP8YMR223W IGO2Q9P305 131 aa2.67□□□□□ -1.98
UBP8YMR223W KIN28P06242 306 aa2.66□□□□□ -1.98
UBP8YMR223W RPS14AP06367 137 aaKnown RBP2.66□□□□□ -1.98
UBP8YMR223W ERD1P16151 362 aa2.66□□□□□ -1.98
UBP8YMR223W MGT1P26188 188 aa2.66□□□□□ -1.98
UBP8YMR223W GSP1P32835 219 aaKnown RBP2.66□□□□□ -1.98
UBP8YMR223W GSP2P32836 220 aaKnown RBP2.66□□□□□ -1.98
UBP8YMR223W KTI12P34253 313 aaKnown RBP2.66□□□□□ -1.98
UBP8YMR223W YHI9P38765 294 aa2.66□□□□□ -1.98
UBP8YMR223W IPI1P38803 334 aaPredicted RBP2.66□□□□□ -1.98
UBP8YMR223W ECM14P38836 430 aa2.66□□□□□ -1.98
UBP8YMR223W RPS14BP39516 138 aaKnown RBP2.66□□□□□ -1.98
UBP8YMR223W MIG3P39943 394 aa2.66□□□□□ -1.98
UBP8YMR223W YFL064CP43540 174 aa2.66□□□□□ -1.98
UBP8YMR223W PRM8P53174 237 aa2.66□□□□□ -1.98
UBP8YMR223W TIM8P57744 87 aa2.66□□□□□ -1.98
UBP8YMR223W SWP1Q02795 286 aa2.66□□□□□ -1.98
UBP8YMR223W YDR249CQ03787 373 aa2.66□□□□□ -1.98
UBP8YMR223W HNT1Q04344 158 aaKnown RBP2.66□□□□□ -1.98
UBP8YMR223W INM2Q05533 292 aa2.66□□□□□ -1.98
UBP8YMR223W SEI1Q06058 285 aa2.66□□□□□ -1.98
UBP8YMR223W YPR202WQ08993 238 aa2.66□□□□□ -1.98
UBP8YMR223W PSK1P31374 1356 aa2.65□□□□□ -1.98
UBP8YMR223W SSN2P38931 1420 aa2.65□□□□□ -1.99
UBP8YMR223W RPL4AP10664 362 aaKnown RBP2.65□□□□□ -1.99
UBP8YMR223W GCN3P14741 305 aa2.65□□□□□ -1.99
UBP8YMR223W MRPS28P21771 286 aa2.65□□□□□ -1.99
UBP8YMR223W BUB2P26448 306 aaPredicted RBP2.65□□□□□ -1.99
UBP8YMR223W INO2P26798 304 aa2.65□□□□□ -1.99
UBP8YMR223W PDC2P32896 925 aa2.65□□□□□ -1.99
UBP8YMR223W EFM1P38732 585 aa2.65□□□□□ -1.99
UBP8YMR223W RMD6P39975 231 aa2.65□□□□□ -1.99
UBP8YMR223W YMR144WP40214 342 aaKnown RBP2.65□□□□□ -1.99
UBP8YMR223W MCM22P47167 239 aa2.65□□□□□ -1.99
UBP8YMR223W BXI1P48558 297 aa2.65□□□□□ -1.99
UBP8YMR223W RPL4BP49626 362 aaKnown RBP2.65□□□□□ -1.99
UBP8YMR223W SUR7P54003 302 aa2.65□□□□□ -1.99
UBP8YMR223W TDA1Q03533 586 aa2.65□□□□□ -1.99
UBP8YMR223W YMR010WQ03687 405 aa2.65□□□□□ -1.99
UBP8YMR223W YML108WQ03759 105 aa2.65□□□□□ -1.99
UBP8YMR223W YLR446WQ06204 433 aa2.65□□□□□ -1.99
UBP8YMR223W YPR091CQ06833 770 aa2.65□□□□□ -1.99
UBP8YMR223W FRE8Q12209 686 aa2.65□□□□□ -1.99
UBP8YMR223W JID1Q12350 301 aa2.65□□□□□ -1.99
UBP8YMR223W TRM10Q12400 293 aa2.65□□□□□ -1.99
UBP8YMR223W IZH2Q12442 317 aa2.65□□□□□ -1.99
UBP8YMR223W PEX11Q12462 236 aa2.65□□□□□ -1.99
UBP8YMR223W SWR1Q05471 1514 aa2.65□□□□□ -1.99
UBP8YMR223W YHR139C-AO13536 103 aa2.64□□□□□ -1.99
UBP8YMR223W NMT1P14743 455 aa2.64□□□□□ -1.99
UBP8YMR223W SCO1P23833 295 aa2.64□□□□□ -1.99
UBP8YMR223W BUD23P25627 275 aaPredicted RBP2.64□□□□□ -1.99
UBP8YMR223W OCH1P31755 480 aa2.64□□□□□ -1.99
UBP8YMR223W PHA2P32452 334 aa2.64□□□□□ -1.99
UBP8YMR223W UGX2P32772 223 aa2.64□□□□□ -1.99
UBP8YMR223W TVP38P36164 337 aa2.64□□□□□ -1.99
UBP8YMR223W COX14P39103 70 aa2.64□□□□□ -1.99
UBP8YMR223W PDS1P40316 373 aaPredicted RBP2.64□□□□□ -1.99
UBP8YMR223W GLC8P41818 229 aa2.64□□□□□ -1.99
UBP8YMR223W EGT2P42835 1041 aa2.64□□□□□ -1.99
UBP8YMR223W CPR7P47103 393 aa2.64□□□□□ -1.99
UBP8YMR223W UBC12P52491 188 aa2.64□□□□□ -1.99
UBP8YMR223W FLC3P53121 802 aa2.64□□□□□ -1.99
UBP8YMR223W YDR476CQ03362 224 aa2.64□□□□□ -1.99
UBP8YMR223W CSN9Q03981 162 aa2.64□□□□□ -1.99
UBP8YMR223W GMC1Q04399 608 aa2.64□□□□□ -1.99
UBP8YMR223W YMR320WQ04897 101 aa2.64□□□□□ -1.99
UBP8YMR223W TAF9Q05027 157 aa2.64□□□□□ -1.99
UBP8YMR223W FRQ1Q06389 190 aa2.64□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 29.4 ms