RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C PHO80P20052 293 aa1.7□□□□□ -2.14
ATG38YLR211C CAM1P29547 415 aaKnown RBP1.7□□□□□ -2.14
ATG38YLR211C SSO1P32867 290 aa1.7□□□□□ -2.14
ATG38YLR211C GDH2P33327 1092 aaKnown RBP1.7□□□□□ -2.14
ATG38YLR211C PRX1P34227 261 aaKnown RBP1.7□□□□□ -2.14
ATG38YLR211C MRPL3P36516 390 aa1.7□□□□□ -2.14
ATG38YLR211C TRM7P38238 310 aaKnown RBP1.7□□□□□ -2.14
ATG38YLR211C FZO1P38297 855 aa1.7□□□□□ -2.14
ATG38YLR211C PRE6P40303 254 aaKnown RBP1.7□□□□□ -2.14
ATG38YLR211C NUP57P48837 541 aa1.7□□□□□ -2.14
ATG38YLR211C PRP24P49960 444 aaKnown RBP1.7□□□□□ -2.14
ATG38YLR211C MIC26P50087 233 aa1.7□□□□□ -2.14
ATG38YLR211C HOP2P53187 214 aa1.7□□□□□ -2.14
ATG38YLR211C GET1P53192 235 aa1.7□□□□□ -2.14
ATG38YLR211C SDC1Q03323 175 aa1.7□□□□□ -2.14
ATG38YLR211C ATG17Q06410 417 aa1.7□□□□□ -2.14
ATG38YLR211C YPR147CQ06522 304 aaKnown RBP1.7□□□□□ -2.14
ATG38YLR211C GPM2Q12008 311 aa1.7□□□□□ -2.14
ATG38YLR211C JLP1Q12358 412 aa1.7□□□□□ -2.14
ATG38YLR211C ATG5Q12380 294 aa1.7□□□□□ -2.14
ATG38YLR211C AGC1Q12482 902 aa1.7□□□□□ -2.14
ATG38YLR211C COX5AP00424 153 aa1.69□□□□□ -2.14
ATG38YLR211C YKR104WP0CE69 306 aa1.69□□□□□ -2.14
ATG38YLR211C KSS1P14681 368 aa1.69□□□□□ -2.14
ATG38YLR211C ATP7P30902 174 aa1.69□□□□□ -2.14
ATG38YLR211C SPS18P32572 300 aa1.69□□□□□ -2.14
ATG38YLR211C CAT2P32796 670 aaKnown RBP1.69□□□□□ -2.14
ATG38YLR211C YKL075CP36083 450 aa1.69□□□□□ -2.14
ATG38YLR211C POP8P38208 133 aa1.69□□□□□ -2.14
ATG38YLR211C IKI1P38874 309 aa1.69□□□□□ -2.14
ATG38YLR211C SEC72P39742 193 aaKnown RBP1.69□□□□□ -2.14
ATG38YLR211C BMT5P40493 336 aa1.69□□□□□ -2.14
ATG38YLR211C DAN1P47178 298 aa1.69□□□□□ -2.14
ATG38YLR211C NSA1P53136 463 aaPredicted RBP1.69□□□□□ -2.14
ATG38YLR211C SPG4Q04438 115 aa1.69□□□□□ -2.14
ATG38YLR211C GIM5Q04493 163 aa1.69□□□□□ -2.14
ATG38YLR211C FUS2Q05670 677 aa1.69□□□□□ -2.14
ATG38YLR211C DCN1Q12395 269 aa1.69□□□□□ -2.14
ATG38YLR211C BCY1P07278 416 aaKnown RBP1.68□□□□□ -2.14
ATG38YLR211C URA6P15700 204 aa1.68□□□□□ -2.14
ATG38YLR211C DBF2P22204 572 aa1.68□□□□□ -2.14
ATG38YLR211C MRPL39P36533 70 aa1.68□□□□□ -2.14
ATG38YLR211C TRM5P38793 499 aa1.68□□□□□ -2.14
ATG38YLR211C YIL001WP40560 513 aa1.68□□□□□ -2.14
ATG38YLR211C ERG10P41338 398 aaKnown RBP1.68□□□□□ -2.14
ATG38YLR211C BAT2P47176 376 aaKnown RBP1.68□□□□□ -2.14
ATG38YLR211C OST3P48439 350 aa1.68□□□□□ -2.14
ATG38YLR211C DSK2P48510 373 aa1.68□□□□□ -2.14
ATG38YLR211C TOS8P53147 276 aa1.68□□□□□ -2.14
ATG38YLR211C YGL034CP53186 121 aa1.68□□□□□ -2.14
ATG38YLR211C FYV6P53913 173 aa1.68□□□□□ -2.14
ATG38YLR211C FCF1Q05498 189 aaPredicted RBP1.68□□□□□ -2.14
ATG38YLR211C SEI1Q06058 285 aa1.68□□□□□ -2.14
ATG38YLR211C YDL144CQ07589 356 aa1.68□□□□□ -2.14
ATG38YLR211C RRP40Q08285 240 aaKnown RBP1.68□□□□□ -2.14
ATG38YLR211C YOR283WQ12040 230 aaKnown RBP1.68□□□□□ -2.14
ATG38YLR211C CMC2Q3E7A4 109 aa1.68□□□□□ -2.14
ATG38YLR211C CDC28P00546 298 aaKnown RBP1.67□□□□□ -2.14
ATG38YLR211C RPL26AP05743 127 aaKnown RBP1.67□□□□□ -2.14
ATG38YLR211C SNA3P14359 133 aa1.67□□□□□ -2.14
ATG38YLR211C SRY1P36007 326 aa1.67□□□□□ -2.14
ATG38YLR211C HMT1P38074 348 aa1.67□□□□□ -2.14
ATG38YLR211C PHO89P38361 574 aa1.67□□□□□ -2.14
ATG38YLR211C GRE3P38715 327 aaKnown RBP RIP-Chip data1.67□□□□□ -2.14not detected
ATG38YLR211C ARN2P38724 620 aa1.67□□□□□ -2.14
ATG38YLR211C EGD2P38879 174 aaKnown RBP1.67□□□□□ -2.14
ATG38YLR211C AVT6P40074 448 aa1.67□□□□□ -2.14
ATG38YLR211C YMR144WP40214 342 aaKnown RBP1.67□□□□□ -2.14
ATG38YLR211C RPL26BP53221 127 aaKnown RBP1.67□□□□□ -2.14
ATG38YLR211C SWT21P53873 357 aaPredicted RBP1.67□□□□□ -2.14
ATG38YLR211C TVP15Q03860 143 aa1.67□□□□□ -2.14
ATG38YLR211C NNT1Q05874 261 aa1.67□□□□□ -2.14
ATG38YLR211C YLR179CQ06252 201 aaKnown RBP1.67□□□□□ -2.14
ATG38YLR211C MSA1Q08471 629 aa1.67□□□□□ -2.14
ATG38YLR211C YPL150WQ12152 901 aa1.67□□□□□ -2.14
ATG38YLR211C YPR011CQ12251 326 aa1.67□□□□□ -2.14
ATG38YLR211C SWI1P09547 1314 aa1.66□□□□□ -2.14
ATG38YLR211C FBA1P14540 359 aaKnown RBP1.66□□□□□ -2.14
ATG38YLR211C OAC1P32332 324 aa1.66□□□□□ -2.14
ATG38YLR211C ERG2P32352 222 aa1.66□□□□□ -2.14
ATG38YLR211C DRE2P36152 348 aa1.66□□□□□ -2.14
ATG38YLR211C MCM22P47167 239 aa1.66□□□□□ -2.14
ATG38YLR211C YJR149WP47177 404 aa1.66□□□□□ -2.14
ATG38YLR211C BRR6P53062 197 aa1.66□□□□□ -2.14
ATG38YLR211C YGL159WP53110 370 aa1.66□□□□□ -2.14
ATG38YLR211C SLX9P53251 210 aaPredicted RBP1.66□□□□□ -2.14
ATG38YLR211C YIP3P53633 176 aa1.66□□□□□ -2.14
ATG38YLR211C YNL046WP53956 172 aa1.66□□□□□ -2.14
ATG38YLR211C PRM15Q03262 622 aa1.66□□□□□ -2.14
ATG38YLR211C YOR186WQ08560 144 aa1.66□□□□□ -2.14
ATG38YLR211C TPO4Q12256 659 aa1.66□□□□□ -2.14
ATG38YLR211C YBL008W-AQ3E821 79 aa1.66□□□□□ -2.14
ATG38YLR211C YPL229WQ99395 206 aa1.66□□□□□ -2.14
ATG38YLR211C PAN1P32521 1480 aa1.66□□□□□ -2.14
ATG38YLR211C YHR139C-AO13536 103 aa1.65□□□□□ -2.15
ATG38YLR211C SPT3P06844 337 aa1.65□□□□□ -2.15
ATG38YLR211C COS2P0CX12 379 aa1.65□□□□□ -2.15
ATG38YLR211C COS3P0CX13 379 aa1.65□□□□□ -2.15
ATG38YLR211C RPL35AP0CX84 120 aaKnown RBP1.65□□□□□ -2.15
ATG38YLR211C RPL35BP0CX85 120 aaKnown RBP1.65□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 1037.5 ms