RNA–Protein interactions for RNA: YLR006C

SSK1, Transcript of Cytoplasmic phosphorelay intermediate osmosensor and regulator, yeastyeast

Gene SSK1, Length 2,139 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSK1YLR006C FEX1Q08913 375 aa5.2□□□□□ -1.58
SSK1YLR006C YOR304C-AO14468 76 aa5.2□□□□□ -1.58
SSK1YLR006C YBR085C-AO43137 85 aa5.2□□□□□ -1.58
SSK1YLR006C AHC2P25649 128 aa5.2□□□□□ -1.58
SSK1YLR006C YKR041WP36134 250 aa5.2□□□□□ -1.58
SSK1YLR006C PRS3P38689 320 aaKnown RBP5.2□□□□□ -1.58
SSK1YLR006C HTD2P38790 280 aaKnown RBP5.2□□□□□ -1.58
SSK1YLR006C BAT2P47176 376 aaKnown RBP5.2□□□□□ -1.58
SSK1YLR006C CDH1P53197 566 aa5.2□□□□□ -1.58
SSK1YLR006C YPL068CQ02749 293 aa5.2□□□□□ -1.58
SSK1YLR006C YMR310CQ04867 317 aaPredicted RBP5.2□□□□□ -1.58
SSK1YLR006C ATG41Q12048 136 aa5.2□□□□□ -1.58
SSK1YLR006C TPO4Q12256 659 aa5.2□□□□□ -1.58
SSK1YLR006C STE7P06784 515 aa5.19□□□□□ -1.58
SSK1YLR006C YGL041W-AP0C5N3 154 aa5.19□□□□□ -1.58
SSK1YLR006C RNA14P25298 677 aaKnown RBP5.19□□□□□ -1.58
SSK1YLR006C PUB1P32588 453 aaKnown RBP RIP-Chip data5.19□□□□□ -1.58not detected
SSK1YLR006C QDR3P38227 689 aa5.19□□□□□ -1.58
SSK1YLR006C IMD2P38697 523 aaKnown RBP5.19□□□□□ -1.58
SSK1YLR006C MED6P38782 295 aa5.19□□□□□ -1.58
SSK1YLR006C UIP3P39547 235 aa5.19□□□□□ -1.58
SSK1YLR006C FMP52P40008 231 aa5.19□□□□□ -1.58
SSK1YLR006C PGA1P53896 198 aa5.19□□□□□ -1.58
SSK1YLR006C NAM8Q00539 523 aaKnown RBP5.19□□□□□ -1.58
SSK1YLR006C RSM23Q01163 450 aa5.19□□□□□ -1.58
SSK1YLR006C YKR011CQ02209 353 aa5.19□□□□□ -1.58
SSK1YLR006C NRG1Q03125 231 aa5.19□□□□□ -1.58
SSK1YLR006C ROT1Q03691 256 aa5.19□□□□□ -1.58
SSK1YLR006C SEC13Q04491 297 aaKnown RBP5.19□□□□□ -1.58
SSK1YLR006C TMN2Q04562 672 aa5.19□□□□□ -1.58
SSK1YLR006C POM33Q12164 279 aa5.19□□□□□ -1.58
SSK1YLR006C YOR114WQ12219 294 aa5.19□□□□□ -1.58
SSK1YLR006C HRP1Q99383 534 aaKnown RBP5.19□□□□□ -1.58
SSK1YLR006C YOL163WP0CF20 169 aa5.18□□□□□ -1.58
SSK1YLR006C ERD1P16151 362 aa5.18□□□□□ -1.58
SSK1YLR006C PRE7P23724 241 aaKnown RBP5.18□□□□□ -1.58
SSK1YLR006C EXG1P23776 448 aaKnown RBP5.18□□□□□ -1.58
SSK1YLR006C IES6P32617 166 aa5.18□□□□□ -1.58
SSK1YLR006C CHL4P38907 458 aa5.18□□□□□ -1.58
SSK1YLR006C YJR011CP47086 261 aaPredicted RBP5.18□□□□□ -1.58
SSK1YLR006C TOS2P50078 622 aa5.18□□□□□ -1.58
SSK1YLR006C COS10P52924 374 aa5.18□□□□□ -1.58
SSK1YLR006C RHO4Q00246 291 aa5.18□□□□□ -1.58
SSK1YLR006C YPL034WQ03083 165 aa5.18□□□□□ -1.58
SSK1YLR006C YMR252CQ04814 134 aa5.18□□□□□ -1.58
SSK1YLR006C FEX2Q08991 375 aa5.18□□□□□ -1.58
SSK1YLR006C ATP14Q12349 124 aa5.18□□□□□ -1.58
SSK1YLR006C YOL162WP0CF19 215 aa5.18□□□□□ -1.58
SSK1YLR006C ERD2P18414 219 aa5.18□□□□□ -1.58
SSK1YLR006C YCR100CP25606 316 aa5.18□□□□□ -1.58
SSK1YLR006C PAU24P38155 120 aa5.18□□□□□ -1.58
SSK1YLR006C ECM34P38728 170 aa5.18□□□□□ -1.58
SSK1YLR006C CIN2P46670 268 aa5.18□□□□□ -1.58
SSK1YLR006C AIM25P47140 327 aa5.18□□□□□ -1.58
SSK1YLR006C FLC3P53121 802 aa5.18□□□□□ -1.58
SSK1YLR006C YPL108WQ02872 168 aaPredicted RBP5.18□□□□□ -1.58
SSK1YLR006C CTL1Q03220 320 aaKnown RBP5.18□□□□□ -1.58
SSK1YLR006C SCS7Q03529 384 aa5.18□□□□□ -1.58
SSK1YLR006C YML096WQ04489 525 aa5.18□□□□□ -1.58
SSK1YLR006C NAT4Q04751 285 aa5.18□□□□□ -1.58
SSK1YLR006C YMR315WQ04869 349 aaKnown RBP5.18□□□□□ -1.58
SSK1YLR006C FRQ1Q06389 190 aa5.18□□□□□ -1.58
SSK1YLR006C NOC4Q06512 552 aaPredicted RBP5.18□□□□□ -1.58
SSK1YLR006C LDS2Q08218 356 aa5.18□□□□□ -1.58
SSK1YLR006C SYC1Q08553 188 aaPredicted RBP5.18□□□□□ -1.58
SSK1YLR006C RDI1Q12434 202 aa5.18□□□□□ -1.58
SSK1YLR006C RPS28BP0C0X0 67 aaKnown RBP5.17□□□□□ -1.58
SSK1YLR006C ACB1P31787 87 aa5.17□□□□□ -1.58
SSK1YLR006C MSS1P32559 526 aaPredicted RBP5.17□□□□□ -1.58
SSK1YLR006C APL3P38065 1025 aa5.17□□□□□ -1.58
SSK1YLR006C PSA1P41940 361 aaKnown RBP5.17□□□□□ -1.58
SSK1YLR006C UBX6P47049 396 aa5.17□□□□□ -1.58
SSK1YLR006C PAU12P53343 120 aa5.17□□□□□ -1.58
SSK1YLR006C COQ11Q05892 277 aa5.17□□□□□ -1.58
SSK1YLR006C HNT3Q08702 217 aa5.17□□□□□ -1.58
SSK1YLR006C POM34Q12445 299 aa5.17□□□□□ -1.58
SSK1YLR006C RPS28AQ3E7X9 67 aaPredicted RBP5.17□□□□□ -1.58
SSK1YLR006C YKR104WP0CE69 306 aa5.17□□□□□ -1.58
SSK1YLR006C PHO80P20052 293 aa5.17□□□□□ -1.58
SSK1YLR006C SCL1P21243 252 aaKnown RBP5.17□□□□□ -1.58
SSK1YLR006C YBR144CP34215 104 aa5.17□□□□□ -1.58
SSK1YLR006C PHD1P36093 366 aa5.17□□□□□ -1.58
SSK1YLR006C YNL195CP40168 261 aa5.17□□□□□ -1.58
SSK1YLR006C CAT5P41735 233 aa5.17□□□□□ -1.58
SSK1YLR006C ADO1P47143 340 aaKnown RBP5.17□□□□□ -1.58
SSK1YLR006C PMT5P52867 743 aa5.17□□□□□ -1.58
SSK1YLR006C UFD1P53044 361 aa5.17□□□□□ -1.58
SSK1YLR006C DOC1P53068 250 aa5.17□□□□□ -1.58
SSK1YLR006C NRK1P53915 240 aa5.17□□□□□ -1.58
SSK1YLR006C ACT1P60010 375 aaKnown RBP5.17□□□□□ -1.58
SSK1YLR006C VBA1Q04301 562 aa5.17□□□□□ -1.58
SSK1YLR006C CYK3Q07533 885 aa5.17□□□□□ -1.58
SSK1YLR006C RIP1P08067 215 aa5.16□□□□□ -1.58
SSK1YLR006C RPL31BP0C2H9 113 aaKnown RBP5.16□□□□□ -1.58
SSK1YLR006C BAR1P12630 587 aa5.16□□□□□ -1.58
SSK1YLR006C MAG1P22134 296 aaKnown RBP5.16□□□□□ -1.58
SSK1YLR006C PTI1P39927 425 aaPredicted RBP5.16□□□□□ -1.58
SSK1YLR006C RPE1P46969 238 aa5.16□□□□□ -1.58
SSK1YLR006C YMR279CQ03263 540 aa5.16□□□□□ -1.58
SSK1YLR006C MRP10O75012 95 aa5.15□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 52.7 ms