RNA–Protein interactions for RNA: YKL007W

CAP1, Transcript of Alpha subunit of the capping protein heterodimer (Cap1p and Cap2p), yeastyeast

Gene CAP1, Length 807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CAP1YKL007W RPT5P33297 434 aaKnown RBP1.89□□□□□ -2.11
CAP1YKL007W COG3P40094 801 aa1.89□□□□□ -2.11
CAP1YKL007W COA1P40452 197 aa1.89□□□□□ -2.11
CAP1YKL007W RPL10P41805 221 aaKnown RBP1.89□□□□□ -2.11
CAP1YKL007W GCN20P43535 752 aaKnown RBP1.89□□□□□ -2.11
CAP1YKL007W AGX1P43567 385 aa1.89□□□□□ -2.11
CAP1YKL007W BNA6P43619 295 aa1.89□□□□□ -2.11
CAP1YKL007W TIM21P53220 239 aa1.89□□□□□ -2.11
CAP1YKL007W YPL039WQ03080 316 aa1.89□□□□□ -2.11
CAP1YKL007W CWC21Q03375 135 aaKnown RBP1.89□□□□□ -2.11
CAP1YKL007W KRE28Q04431 385 aa1.89□□□□□ -2.11
CAP1YKL007W RNH1Q04740 348 aa1.89□□□□□ -2.11
CAP1YKL007W SFH1Q06168 426 aa1.89□□□□□ -2.11
CAP1YKL007W CTS2Q06350 511 aa1.89□□□□□ -2.11
CAP1YKL007W CTR3Q06686 241 aa1.89□□□□□ -2.11
CAP1YKL007W SMT3Q12306 101 aaKnown RBP1.89□□□□□ -2.11
CAP1YKL007W SME1Q12330 94 aaPredicted RBP1.89□□□□□ -2.11
CAP1YKL007W FLO1P32768 1537 aa1.88□□□□□ -2.11
CAP1YKL007W TOM40P23644 387 aaKnown RBP1.88□□□□□ -2.11
CAP1YKL007W CWP1P28319 239 aa1.88□□□□□ -2.11
CAP1YKL007W SRB4P32569 687 aa1.88□□□□□ -2.11
CAP1YKL007W DRE2P36152 348 aa1.88□□□□□ -2.11
CAP1YKL007W PRS4P38063 326 aaPredicted RBP1.88□□□□□ -2.11
CAP1YKL007W HMT1P38074 348 aa1.88□□□□□ -2.11
CAP1YKL007W PRS2P38620 318 aaKnown RBP1.88□□□□□ -2.11
CAP1YKL007W MRPL49P40858 161 aaPredicted RBP1.88□□□□□ -2.11
CAP1YKL007W YJL118WP47022 219 aa1.88□□□□□ -2.11
CAP1YKL007W YJR146WP47174 117 aa1.88□□□□□ -2.11
CAP1YKL007W MNT4P53745 580 aa1.88□□□□□ -2.11
CAP1YKL007W YNL134CP53912 376 aaKnown RBP1.88□□□□□ -2.11
CAP1YKL007W TIM11P81449 96 aaPredicted RBP1.88□□□□□ -2.11
CAP1YKL007W PET117Q02771 107 aa1.88□□□□□ -2.11
CAP1YKL007W SDC1Q03323 175 aa1.88□□□□□ -2.11
CAP1YKL007W SEC10Q06245 871 aa1.88□□□□□ -2.11
CAP1YKL007W SDO1Q07953 250 aaKnown RBP1.88□□□□□ -2.11
CAP1YKL007W YOL019WQ08157 551 aa1.88□□□□□ -2.11
CAP1YKL007W YOR268CQ08734 132 aa1.88□□□□□ -2.11
CAP1YKL007W YBL112CQ3E7Y4 105 aa1.88□□□□□ -2.11
CAP1YKL007W YOS9Q99220 542 aa1.88□□□□□ -2.11
CAP1YKL007W RPS3P05750 240 aaKnown RBP1.87□□□□□ -2.11
CAP1YKL007W RNA15P25299 296 aaPredicted RBP1.87□□□□□ -2.11
CAP1YKL007W POF1P25576 258 aa1.87□□□□□ -2.11
CAP1YKL007W YCR016WP25617 290 aaKnown RBP1.87□□□□□ -2.11
CAP1YKL007W SFC1P33303 322 aa1.87□□□□□ -2.11
CAP1YKL007W ARN2P38724 620 aa1.87□□□□□ -2.11
CAP1YKL007W TCD1P38756 429 aa1.87□□□□□ -2.11
CAP1YKL007W HYR1P40581 163 aaKnown RBP1.87□□□□□ -2.11
CAP1YKL007W YJL016WP47072 561 aa1.87□□□□□ -2.11
CAP1YKL007W YJR012CP47087 207 aa1.87□□□□□ -2.11
CAP1YKL007W PEX31P53203 462 aa1.87□□□□□ -2.11
CAP1YKL007W COS6P53344 381 aa1.87□□□□□ -2.11
CAP1YKL007W FMP41P53889 259 aaKnown RBP1.87□□□□□ -2.11
CAP1YKL007W YDR209CQ03480 137 aa1.87□□□□□ -2.11
CAP1YKL007W OST6Q03723 332 aa1.87□□□□□ -2.11
CAP1YKL007W YLR283WQ05867 314 aa1.87□□□□□ -2.11
CAP1YKL007W PAM18Q07914 168 aa1.87□□□□□ -2.11
CAP1YKL007W CSM4Q08955 156 aa1.87□□□□□ -2.11
CAP1YKL007W EMC6Q12431 108 aa1.87□□□□□ -2.11
CAP1YKL007W PDR18P53756 1333 aa1.87□□□□□ -2.11
CAP1YKL007W GSC2P40989 1895 aa1.86□□□□□ -2.11
CAP1YKL007W RAD10P06838 210 aa1.86□□□□□ -2.11
CAP1YKL007W VPS3P23643 1011 aa1.86□□□□□ -2.11
CAP1YKL007W DPB2P24482 689 aaPredicted RBP1.86□□□□□ -2.11
CAP1YKL007W NTG1P31378 399 aa1.86□□□□□ -2.11
CAP1YKL007W SKI2P35207 1287 aaKnown RBP RIP-Chip data1.86□□□□□ -2.11not detected
CAP1YKL007W NRG2P38082 220 aa1.86□□□□□ -2.11
CAP1YKL007W MRX3P38172 270 aa1.86□□□□□ -2.11
CAP1YKL007W YHL026CP38740 315 aa1.86□□□□□ -2.11
CAP1YKL007W BIG1P38813 335 aa1.86□□□□□ -2.11
CAP1YKL007W BFR1P38934 470 aaKnown RBP RIP-Chip data1.86□□□□□ -2.11not detected
CAP1YKL007W TEM1P38987 245 aa1.86□□□□□ -2.11
CAP1YKL007W TIF34P40217 347 aaKnown RBP1.86□□□□□ -2.11
CAP1YKL007W SLM2P53955 656 aa1.86□□□□□ -2.11
CAP1YKL007W ARV1Q06541 321 aa1.86□□□□□ -2.11
CAP1YKL007W ATG31Q12421 196 aa1.86□□□□□ -2.11
CAP1YKL007W SNF8Q12483 233 aa1.86□□□□□ -2.11
CAP1YKL007W NOT5Q12514 560 aaPredicted RBP1.86□□□□□ -2.11
CAP1YKL007W SAC3P46674 1301 aa1.86□□□□□ -2.11
CAP1YKL007W MSN4P33749 630 aa1.85□□□□□ -2.11
CAP1YKL007W PRX1P34227 261 aaKnown RBP1.85□□□□□ -2.11
CAP1YKL007W YER085CP40058 173 aa1.85□□□□□ -2.11
CAP1YKL007W DSN1P40568 576 aa1.85□□□□□ -2.11
CAP1YKL007W BAT2P47176 376 aaKnown RBP1.85□□□□□ -2.11
CAP1YKL007W DAN1P47178 298 aa1.85□□□□□ -2.11
CAP1YKL007W NIF3P53081 288 aa1.85□□□□□ -2.11
CAP1YKL007W SLX9P53251 210 aaPredicted RBP1.85□□□□□ -2.11
CAP1YKL007W GRX3Q03835 250 aa1.85□□□□□ -2.11
CAP1YKL007W YMR114CQ04471 368 aaKnown RBP1.85□□□□□ -2.11
CAP1YKL007W MSH5Q12175 901 aa1.85□□□□□ -2.11
CAP1YKL007W MYO1P08964 1928 aa1.85□□□□□ -2.11
CAP1YKL007W MATALPHA2P0CY08 210 aa1.84□□□□□ -2.11
CAP1YKL007W HMLALPHA2P0CY09 210 aa1.84□□□□□ -2.11
CAP1YKL007W RPL4AP10664 362 aaKnown RBP1.84□□□□□ -2.11
CAP1YKL007W BMH2P34730 273 aaKnown RBP1.84□□□□□ -2.11
CAP1YKL007W FZO1P38297 855 aa1.84□□□□□ -2.11
CAP1YKL007W RPL4BP49626 362 aaKnown RBP1.84□□□□□ -2.11
CAP1YKL007W MAL13P53338 473 aa1.84□□□□□ -2.11
CAP1YKL007W ATG17Q06410 417 aa1.84□□□□□ -2.11
CAP1YKL007W YOR029WQ12243 111 aa1.84□□□□□ -2.11
CAP1YKL007W SNU23Q12368 194 aaPredicted RBP1.84□□□□□ -2.11
Retrieved 100 of 5,963 RNA–protein pairs in 15.1 ms