RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W UFD1P53044 361 aa5.08□□□□□ -1.6
PRE3YJL001W WSC2P53832 503 aa5.08□□□□□ -1.6
PRE3YJL001W OST6Q03723 332 aa5.08□□□□□ -1.6
PRE3YJL001W YDL009CQ12210 107 aa5.08□□□□□ -1.6
PRE3YJL001W SCM3Q12334 223 aa5.08□□□□□ -1.6
PRE3YJL001W YMR105W-AQ8TGS8 64 aa5.08□□□□□ -1.6
PRE3YJL001W MET17P06106 444 aa5.07□□□□□ -1.6
PRE3YJL001W SIR2P06700 562 aa5.07□□□□□ -1.6
PRE3YJL001W YCR041WP37265 110 aa5.07□□□□□ -1.6
PRE3YJL001W FIG1P38224 298 aa5.07□□□□□ -1.6
PRE3YJL001W PHO90P39535 881 aa5.07□□□□□ -1.6
PRE3YJL001W CIN2P46670 268 aa5.07□□□□□ -1.6
PRE3YJL001W GON7P46984 123 aa5.07□□□□□ -1.6
PRE3YJL001W SFH5P47008 294 aa5.07□□□□□ -1.6
PRE3YJL001W GLO1P50107 326 aa5.07□□□□□ -1.6
PRE3YJL001W PGA1P53896 198 aa5.07□□□□□ -1.6
PRE3YJL001W TDH2P00358 332 aaKnown RBP5.06□□□□□ -1.6
PRE3YJL001W CKA1P15790 372 aa5.06□□□□□ -1.6
PRE3YJL001W MRPS28P21771 286 aa5.06□□□□□ -1.6
PRE3YJL001W VMA16P23968 213 aa5.06□□□□□ -1.6
PRE3YJL001W DPH5P32469 300 aaPredicted RBP5.06□□□□□ -1.6
PRE3YJL001W PPZ2P33329 710 aa5.06□□□□□ -1.6
PRE3YJL001W SPC34P36131 295 aa5.06□□□□□ -1.6
PRE3YJL001W PDX3P38075 228 aaKnown RBP5.06□□□□□ -1.6
PRE3YJL001W SBE22P38814 852 aa5.06□□□□□ -1.6
PRE3YJL001W YJL016WP47072 561 aa5.06□□□□□ -1.6
PRE3YJL001W RMR1P53060 241 aa5.06□□□□□ -1.6
PRE3YJL001W VPS71Q03433 280 aa5.06□□□□□ -1.6
PRE3YJL001W YMR166CQ03829 368 aa5.06□□□□□ -1.6
PRE3YJL001W MRX8Q05473 314 aa5.06□□□□□ -1.6
PRE3YJL001W RKM1Q08961 583 aaPredicted RBP5.06□□□□□ -1.6
PRE3YJL001W MRP2P10663 115 aaPredicted RBP5.05□□□□□ -1.6
PRE3YJL001W NAM2P11325 894 aa5.05□□□□□ -1.6
PRE3YJL001W PHO80P20052 293 aa5.05□□□□□ -1.6
PRE3YJL001W SAG1P20840 650 aa5.05□□□□□ -1.6
PRE3YJL001W SSE2P32590 693 aaKnown RBP5.05□□□□□ -1.6
PRE3YJL001W IPT1P38954 527 aa5.05□□□□□ -1.6
PRE3YJL001W YNR048WP53740 393 aa5.05□□□□□ -1.6
PRE3YJL001W SAM50P53969 484 aa5.05□□□□□ -1.6
PRE3YJL001W YDR248CQ03786 193 aa5.05□□□□□ -1.6
PRE3YJL001W RFU1Q08003 200 aa5.05□□□□□ -1.6
PRE3YJL001W ISA2Q12425 185 aa5.05□□□□□ -1.6
PRE3YJL001W ILV5P06168 395 aaKnown RBP5.04□□□□□ -1.6
PRE3YJL001W PMR1P13586 950 aa5.04□□□□□ -1.6
PRE3YJL001W APE2P32454 952 aaKnown RBP5.04□□□□□ -1.6
PRE3YJL001W MRPL6P32904 214 aa5.04□□□□□ -1.6
PRE3YJL001W FRM2P37261 193 aa5.04□□□□□ -1.6
PRE3YJL001W PEX32P38292 413 aa5.04□□□□□ -1.6
PRE3YJL001W IMD2P38697 523 aaKnown RBP5.04□□□□□ -1.6
PRE3YJL001W RRG9P40156 214 aa5.04□□□□□ -1.6
PRE3YJL001W TIR3P40552 269 aa5.04□□□□□ -1.6
PRE3YJL001W IMD3P50095 523 aaKnown RBP5.04□□□□□ -1.6
PRE3YJL001W NQM1P53228 333 aaPredicted RBP5.04□□□□□ -1.6
PRE3YJL001W PXR1P53335 271 aaPredicted RBP5.04□□□□□ -1.6
PRE3YJL001W RAD52P06778 471 aaKnown RBP5.03□□□□□ -1.6
PRE3YJL001W RPL30P14120 105 aaKnown RBP5.03□□□□□ -1.6
PRE3YJL001W HXT2P23585 541 aa5.03□□□□□ -1.6
PRE3YJL001W FUN19P28003 413 aaPredicted RBP5.03□□□□□ -1.6
PRE3YJL001W SUA7P29055 345 aaPredicted RBP5.03□□□□□ -1.6
PRE3YJL001W HOT13P36078 116 aa5.03□□□□□ -1.6
PRE3YJL001W YPK3P38070 525 aa5.03□□□□□ -1.6
PRE3YJL001W CUE1P38428 203 aa5.03□□□□□ -1.6
PRE3YJL001W UIP3P39547 235 aa5.03□□□□□ -1.6
PRE3YJL001W FAR7P43592 221 aa5.03□□□□□ -1.6
PRE3YJL001W CAC2Q04199 468 aa5.03□□□□□ -1.6
PRE3YJL001W GSH2Q08220 491 aa5.03□□□□□ -1.6
PRE3YJL001W FCY22Q12119 530 aa5.03□□□□□ -1.6
PRE3YJL001W INP53Q12271 1107 aa5.03□□□□□ -1.6
PRE3YJL001W YJR112W-AQ3E743 109 aa5.03□□□□□ -1.6
PRE3YJL001W RPL24AP04449 155 aaKnown RBP5.02□□□□□ -1.61
PRE3YJL001W ELO2P25358 347 aa5.02□□□□□ -1.61
PRE3YJL001W TCA17P32613 152 aa5.02□□□□□ -1.61
PRE3YJL001W DIM1P41819 318 aaKnown RBP5.02□□□□□ -1.61
PRE3YJL001W PIR5P46999 287 aa5.02□□□□□ -1.61
PRE3YJL001W XPT1P47165 209 aa5.02□□□□□ -1.61
PRE3YJL001W COS10P52924 374 aa5.02□□□□□ -1.61
PRE3YJL001W VOA1P53262 265 aa5.02□□□□□ -1.61
PRE3YJL001W VIK1Q12045 647 aa5.02□□□□□ -1.61
PRE3YJL001W KIN28P06242 306 aa5.01□□□□□ -1.61
PRE3YJL001W VMA8P32610 256 aaKnown RBP5.01□□□□□ -1.61
PRE3YJL001W YER079WP40052 210 aaKnown RBP5.01□□□□□ -1.61
PRE3YJL001W AGP3P43548 558 aa5.01□□□□□ -1.61
PRE3YJL001W PHB2P50085 310 aa5.01□□□□□ -1.61
PRE3YJL001W SAY1P53324 424 aa5.01□□□□□ -1.61
PRE3YJL001W AAH1P53909 347 aa5.01□□□□□ -1.61
PRE3YJL001W ARR2Q06597 130 aa5.01□□□□□ -1.61
PRE3YJL001W FRE3Q08905 711 aa5.01□□□□□ -1.61
PRE3YJL001W RIB3Q99258 208 aa5.01□□□□□ -1.61
PRE3YJL001W SGA1P08019 549 aa5□□□□□ -1.61
PRE3YJL001W UBC8P28263 218 aa5□□□□□ -1.61
PRE3YJL001W NPL6P32832 435 aa5□□□□□ -1.61
PRE3YJL001W ZRT3P34240 503 aa5□□□□□ -1.61
PRE3YJL001W YGL114WP53134 725 aa5□□□□□ -1.61
PRE3YJL001W ATP23P53722 227 aa5□□□□□ -1.61
PRE3YJL001W YPL067CQ02754 198 aa5□□□□□ -1.61
PRE3YJL001W YDR239CQ03780 787 aa5□□□□□ -1.61
PRE3YJL001W GAL83Q04739 417 aa5□□□□□ -1.61
PRE3YJL001W LUC7Q07508 261 aaPredicted RBP5□□□□□ -1.61
PRE3YJL001W DTD1Q07648 150 aaKnown RBP5□□□□□ -1.61
PRE3YJL001W GRC3Q07845 632 aa5□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 73.8 ms