RNA–Protein interactions for RNA: YIL138C

TPM2, Transcript of Minor isoform of tropomyosin, yeastyeast

Gene TPM2, Length 486 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TPM2YIL138C GAA1P39012 614 aa1.6□□□□□ -2.15
TPM2YIL138C NBP1P52919 319 aaPredicted RBP1.6□□□□□ -2.15
TPM2YIL138C SWS2P53937 143 aa1.6□□□□□ -2.15
TPM2YIL138C ALG11P53954 548 aaKnown RBP1.6□□□□□ -2.15
TPM2YIL138C YDR209CQ03480 137 aa1.6□□□□□ -2.15
TPM2YIL138C ATC1Q04005 294 aa1.6□□□□□ -2.15
TPM2YIL138C SML1Q04964 104 aa1.6□□□□□ -2.15
TPM2YIL138C DAS2Q12084 232 aa1.6□□□□□ -2.15
TPM2YIL138C SME1Q12330 94 aaPredicted RBP1.6□□□□□ -2.15
TPM2YIL138C YPL119C-AQ3E751 87 aa1.6□□□□□ -2.15
TPM2YIL138C YBL112CQ3E7Y4 105 aa1.6□□□□□ -2.15
TPM2YIL138C PMD1P32634 1753 aa1.59□□□□□ -2.15
TPM2YIL138C HKR1P41809 1802 aa1.59□□□□□ -2.15
TPM2YIL138C TCP1P12612 559 aaKnown RBP1.59□□□□□ -2.15
TPM2YIL138C DAL82P21705 255 aa1.59□□□□□ -2.15
TPM2YIL138C SFC1P33303 322 aa1.59□□□□□ -2.15
TPM2YIL138C YUH1P35127 236 aa1.59□□□□□ -2.15
TPM2YIL138C MAL32P38158 584 aa1.59□□□□□ -2.15
TPM2YIL138C SIP3P38717 1229 aa1.59□□□□□ -2.15
TPM2YIL138C PRM9P39551 298 aa1.59□□□□□ -2.15
TPM2YIL138C FIS1P40515 155 aa1.59□□□□□ -2.15
TPM2YIL138C RPL10P41805 221 aaKnown RBP1.59□□□□□ -2.15
TPM2YIL138C PIR5P46999 287 aa1.59□□□□□ -2.15
TPM2YIL138C OST3P48439 350 aa1.59□□□□□ -2.15
TPM2YIL138C NBP35P52920 328 aa1.59□□□□□ -2.15
TPM2YIL138C MAL12P53341 584 aa1.59□□□□□ -2.15
TPM2YIL138C LAP3Q01532 483 aaKnown RBP RIP-Chip data1.59□□□□□ -2.15not detected
TPM2YIL138C KAP95Q06142 861 aaKnown RBP1.59□□□□□ -2.15
TPM2YIL138C SMD2Q06217 110 aaKnown RBP1.59□□□□□ -2.15
TPM2YIL138C SUE1Q06524 206 aa1.59□□□□□ -2.15
TPM2YIL138C RSR1P13856 272 aa1.58□□□□□ -2.16
TPM2YIL138C POL30P15873 258 aaKnown RBP1.58□□□□□ -2.16
TPM2YIL138C RPO26P20435 155 aa1.58□□□□□ -2.16
TPM2YIL138C DPB2P24482 689 aaPredicted RBP1.58□□□□□ -2.16
TPM2YIL138C RME1P32338 300 aaKnown RBP1.58□□□□□ -2.16
TPM2YIL138C QRI5P32344 111 aa1.58□□□□□ -2.16
TPM2YIL138C SRB4P32569 687 aa1.58□□□□□ -2.16
TPM2YIL138C COY1P34237 679 aa1.58□□□□□ -2.16
TPM2YIL138C YHL049CP38722 271 aa1.58□□□□□ -2.16
TPM2YIL138C SPT8P38915 602 aa1.58□□□□□ -2.16
TPM2YIL138C HMF1P40037 129 aaKnown RBP1.58□□□□□ -2.16
TPM2YIL138C YJL028WP47062 111 aa1.58□□□□□ -2.16
TPM2YIL138C YJR141WP47172 347 aaPredicted RBP1.58□□□□□ -2.16
TPM2YIL138C SSU72P53538 206 aaPredicted RBP1.58□□□□□ -2.16
TPM2YIL138C PGA2P53903 129 aa1.58□□□□□ -2.16
TPM2YIL138C RPL22BP56628 122 aaKnown RBP1.58□□□□□ -2.16
TPM2YIL138C FCF1Q05498 189 aaPredicted RBP1.58□□□□□ -2.16
TPM2YIL138C CDD1Q06549 142 aa1.58□□□□□ -2.16
TPM2YIL138C PLB3Q08108 686 aa1.58□□□□□ -2.16
TPM2YIL138C SLD7Q08457 257 aa1.58□□□□□ -2.16
TPM2YIL138C PST1Q12355 444 aa1.58□□□□□ -2.16
TPM2YIL138C GIS3Q12418 502 aa1.58□□□□□ -2.16
TPM2YIL138C CDC8P00572 216 aa1.57□□□□□ -2.16
TPM2YIL138C RAD10P06838 210 aa1.57□□□□□ -2.16
TPM2YIL138C COS2P0CX12 379 aa1.57□□□□□ -2.16
TPM2YIL138C COS3P0CX13 379 aa1.57□□□□□ -2.16
TPM2YIL138C POX1P13711 748 aa1.57□□□□□ -2.16
TPM2YIL138C VPS3P23643 1011 aa1.57□□□□□ -2.16
TPM2YIL138C RNP1P32385 249 aa1.57□□□□□ -2.16
TPM2YIL138C TVP38P36164 337 aa1.57□□□□□ -2.16
TPM2YIL138C PRS2P38620 318 aaKnown RBP1.57□□□□□ -2.16
TPM2YIL138C BIG1P38813 335 aa1.57□□□□□ -2.16
TPM2YIL138C AGX1P43567 385 aa1.57□□□□□ -2.16
TPM2YIL138C YAR1P46683 200 aa1.57□□□□□ -2.16
TPM2YIL138C AAH1P53909 347 aa1.57□□□□□ -2.16
TPM2YIL138C BOP2Q06150 570 aa1.57□□□□□ -2.16
TPM2YIL138C CTS2Q06350 511 aa1.57□□□□□ -2.16
TPM2YIL138C RRT8Q08219 342 aa1.57□□□□□ -2.16
TPM2YIL138C RIO1Q12196 484 aaKnown RBP1.57□□□□□ -2.16
TPM2YIL138C AGC1Q12482 902 aa1.57□□□□□ -2.16
TPM2YIL138C YKL068W-AQ3E826 78 aa1.57□□□□□ -2.16
TPM2YIL138C TOM40P23644 387 aaKnown RBP1.56□□□□□ -2.16
TPM2YIL138C CWP1P28319 239 aa1.56□□□□□ -2.16
TPM2YIL138C MED6P38782 295 aa1.56□□□□□ -2.16
TPM2YIL138C TEM1P38987 245 aa1.56□□□□□ -2.16
TPM2YIL138C DSN1P40568 576 aa1.56□□□□□ -2.16
TPM2YIL138C ASI3P53983 676 aa1.56□□□□□ -2.16
TPM2YIL138C TIM8P57744 87 aa1.56□□□□□ -2.16
TPM2YIL138C GRH1Q04410 372 aaKnown RBP1.56□□□□□ -2.16
TPM2YIL138C YMR321CQ04898 105 aa1.56□□□□□ -2.16
TPM2YIL138C RDS3Q06835 107 aaPredicted RBP1.56□□□□□ -2.16
TPM2YIL138C YPL247CQ12523 523 aa1.56□□□□□ -2.16
TPM2YIL138C YLR462WO13556 202 aa1.55□□□□□ -2.16
TPM2YIL138C QCR6P00127 147 aa1.55□□□□□ -2.16
TPM2YIL138C RAD3P06839 778 aa1.55□□□□□ -2.16
TPM2YIL138C CDC33P07260 213 aaKnown RBP1.55□□□□□ -2.16
TPM2YIL138C MSF1P08425 469 aa1.55□□□□□ -2.16
TPM2YIL138C CDC10P25342 322 aaKnown RBP1.55□□□□□ -2.16
TPM2YIL138C UBC6P33296 250 aaPredicted RBP1.55□□□□□ -2.16
TPM2YIL138C JEN1P36035 616 aa1.55□□□□□ -2.16
TPM2YIL138C SSH1P38353 490 aaKnown RBP1.55□□□□□ -2.16
TPM2YIL138C YHR045WP38775 560 aa1.55□□□□□ -2.16
TPM2YIL138C YEL075CP39972 122 aa1.55□□□□□ -2.16
TPM2YIL138C YER189WP40104 122 aa1.55□□□□□ -2.16
TPM2YIL138C BNA6P43619 295 aa1.55□□□□□ -2.16
TPM2YIL138C GON7P46984 123 aa1.55□□□□□ -2.16
TPM2YIL138C RPC17P47076 161 aa1.55□□□□□ -2.16
TPM2YIL138C YJR079WP47126 109 aa1.55□□□□□ -2.16
TPM2YIL138C DSK2P48510 373 aa1.55□□□□□ -2.16
TPM2YIL138C MDM34P53083 459 aa1.55□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 50.6 ms