RNA–Protein interactions for RNA: YHR012W

VPS29, Transcript of Subunit of the membrane-associated retromer complex, yeastyeast

Gene VPS29, Length 849 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS29YHR012W UTP15Q04305 513 aaKnown RBP4.02□□□□□ -1.77
VPS29YHR012W RBS1Q05672 457 aaKnown RBP4.02□□□□□ -1.77
VPS29YHR012W YLR345WQ06137 509 aa4.02□□□□□ -1.77
VPS29YHR012W SOR2Q07786 357 aa4.02□□□□□ -1.77
VPS29YHR012W WHI5Q12416 295 aa4.02□□□□□ -1.77
VPS29YHR012W YPR1Q12458 312 aa4.02□□□□□ -1.77
VPS29YHR012W CDC28P00546 298 aaKnown RBP4.01□□□□□ -1.77
VPS29YHR012W COX9P07255 59 aa4.01□□□□□ -1.77
VPS29YHR012W DPB2P24482 689 aaPredicted RBP4.01□□□□□ -1.77
VPS29YHR012W YCR101CP25607 182 aa4.01□□□□□ -1.77
VPS29YHR012W MTC2P34246 357 aa4.01□□□□□ -1.77
VPS29YHR012W YNK1P36010 153 aaKnown RBP4.01□□□□□ -1.77
VPS29YHR012W GOS1P38736 223 aa4.01□□□□□ -1.77
VPS29YHR012W SSZ1P38788 538 aaKnown RBP4.01□□□□□ -1.77
VPS29YHR012W PAC2P39937 518 aa4.01□□□□□ -1.77
VPS29YHR012W NOP16P40007 231 aaKnown RBP4.01□□□□□ -1.77
VPS29YHR012W IES5P40060 125 aa4.01□□□□□ -1.77
VPS29YHR012W AVT6P40074 448 aa4.01□□□□□ -1.77
VPS29YHR012W ATF1P40353 525 aa4.01□□□□□ -1.77
VPS29YHR012W PUS4P48567 403 aaKnown RBP4.01□□□□□ -1.77
VPS29YHR012W YGR045CP53229 120 aa4.01□□□□□ -1.77
VPS29YHR012W APJ1P53940 528 aa4.01□□□□□ -1.77
VPS29YHR012W SRL4Q03085 281 aa4.01□□□□□ -1.77
VPS29YHR012W UPS1Q05776 175 aa4.01□□□□□ -1.77
VPS29YHR012W PHO4P07270 312 aaKnown RBP4□□□□□ -1.77
VPS29YHR012W MATALPHA1P0CY06 175 aa4□□□□□ -1.77
VPS29YHR012W HMLALPHA1P0CY07 175 aa4□□□□□ -1.77
VPS29YHR012W ENA1P13587 1091 aa4□□□□□ -1.77
VPS29YHR012W ERS1P17261 260 aa4□□□□□ -1.77
VPS29YHR012W ELO2P25358 347 aa4□□□□□ -1.77
VPS29YHR012W PRE4P30657 266 aa4□□□□□ -1.77
VPS29YHR012W FUN26P31381 517 aa4□□□□□ -1.77
VPS29YHR012W VMA6P32366 345 aaKnown RBP4□□□□□ -1.77
VPS29YHR012W SNC2P33328 115 aa4□□□□□ -1.77
VPS29YHR012W SWD2P36104 329 aaPredicted RBP4□□□□□ -1.77
VPS29YHR012W FIG1P38224 298 aa4□□□□□ -1.77
VPS29YHR012W EGD2P38879 174 aaKnown RBP4□□□□□ -1.77
VPS29YHR012W YND1P40009 630 aa4□□□□□ -1.77
VPS29YHR012W FMC1P40491 155 aa4□□□□□ -1.77
VPS29YHR012W PMT6P42934 759 aa4□□□□□ -1.77
VPS29YHR012W PIR5P46999 287 aa4□□□□□ -1.77
VPS29YHR012W TAX4P47030 604 aa4□□□□□ -1.77
VPS29YHR012W SSN8P47821 323 aa4□□□□□ -1.77
VPS29YHR012W PAU12P53343 120 aa4□□□□□ -1.77
VPS29YHR012W ENA2Q01896 1091 aa4□□□□□ -1.77
VPS29YHR012W NGL2Q03264 515 aaKnown RBP4□□□□□ -1.77
VPS29YHR012W TLG1Q03322 224 aa4□□□□□ -1.77
VPS29YHR012W CAC2Q04199 468 aa4□□□□□ -1.77
VPS29YHR012W YOL114CQ12322 202 aa4□□□□□ -1.77
VPS29YHR012W EAF3Q12432 401 aa4□□□□□ -1.77
VPS29YHR012W FRE6Q12473 712 aa4□□□□□ -1.77
VPS29YHR012W ENA5Q12691 1091 aa4□□□□□ -1.77
VPS29YHR012W YPL119C-AQ3E751 87 aa4□□□□□ -1.77
VPS29YHR012W MED11Q99278 115 aa4□□□□□ -1.77
VPS29YHR012W MET17P06106 444 aa3.99□□□□□ -1.77
VPS29YHR012W MRP1P10662 321 aaKnown RBP3.99□□□□□ -1.77
VPS29YHR012W BGL2P15703 313 aaKnown RBP3.99□□□□□ -1.77
VPS29YHR012W TOM40P23644 387 aaKnown RBP3.99□□□□□ -1.77
VPS29YHR012W FEN2P25621 512 aaKnown RBP3.99□□□□□ -1.77
VPS29YHR012W AHC2P25649 128 aa3.99□□□□□ -1.77
VPS29YHR012W NDC1P32500 655 aa3.99□□□□□ -1.77
VPS29YHR012W UTP11P34247 250 aaPredicted RBP3.99□□□□□ -1.77
VPS29YHR012W SDS24P38314 527 aa3.99□□□□□ -1.77
VPS29YHR012W GNA1P43577 159 aaPredicted RBP3.99□□□□□ -1.77
VPS29YHR012W MRX5P47007 382 aa3.99□□□□□ -1.77
VPS29YHR012W TTI2P47168 421 aa3.99□□□□□ -1.77
VPS29YHR012W RBL2P48606 106 aaKnown RBP3.99□□□□□ -1.77
VPS29YHR012W PHB2P50085 310 aa3.99□□□□□ -1.77
VPS29YHR012W RRP17Q04031 235 aaPredicted RBP3.99□□□□□ -1.77
VPS29YHR012W YDR114CQ04597 100 aa3.99□□□□□ -1.77
VPS29YHR012W FMP42Q04991 504 aa3.99□□□□□ -1.77
VPS29YHR012W YLR173WQ06247 608 aa3.99□□□□□ -1.77
VPS29YHR012W MSH5Q12175 901 aa3.99□□□□□ -1.77
VPS29YHR012W BBP1Q12365 385 aa3.99□□□□□ -1.77
VPS29YHR012W SIR2P06700 562 aa3.98□□□□□ -1.77
VPS29YHR012W CDC31P06704 161 aaKnown RBP3.98□□□□□ -1.77
VPS29YHR012W ADK1P07170 222 aaKnown RBP3.98□□□□□ -1.77
VPS29YHR012W IMP1P28627 190 aa3.98□□□□□ -1.77
VPS29YHR012W DOA4P32571 926 aa3.98□□□□□ -1.77
VPS29YHR012W CPR5P35176 225 aa3.98□□□□□ -1.77
VPS29YHR012W CBT1P36038 271 aaPredicted RBP3.98□□□□□ -1.77
VPS29YHR012W ADH5P38113 351 aaKnown RBP3.98□□□□□ -1.77
VPS29YHR012W PAU24P38155 120 aa3.98□□□□□ -1.77
VPS29YHR012W PRS2P38620 318 aaKnown RBP3.98□□□□□ -1.77
VPS29YHR012W SOP4P39543 234 aaPredicted RBP3.98□□□□□ -1.77
VPS29YHR012W YFL054CP43549 646 aa3.98□□□□□ -1.77
VPS29YHR012W YGR054WP53235 642 aaKnown RBP3.98□□□□□ -1.77
VPS29YHR012W MCM21Q06675 368 aa3.98□□□□□ -1.77
VPS29YHR012W YOR186WQ08560 144 aa3.98□□□□□ -1.77
VPS29YHR012W RFM1Q12192 310 aa3.98□□□□□ -1.77
VPS29YHR012W IES3Q12345 250 aa3.98□□□□□ -1.77
VPS29YHR012W TRM10Q12400 293 aa3.98□□□□□ -1.77
VPS29YHR012W ATG40Q99325 256 aa3.98□□□□□ -1.77
VPS29YHR012W NPL6P32832 435 aa3.97□□□□□ -1.77
VPS29YHR012W YCR041WP37265 110 aa3.97□□□□□ -1.77
VPS29YHR012W RTT105P40063 208 aa3.97□□□□□ -1.77
VPS29YHR012W CCS1P40202 249 aaKnown RBP3.97□□□□□ -1.77
VPS29YHR012W YIP1P53039 248 aa3.97□□□□□ -1.77
VPS29YHR012W SCW4P53334 386 aaKnown RBP3.97□□□□□ -1.77
VPS29YHR012W MRPL13Q02204 264 aa3.97□□□□□ -1.77
Retrieved 100 of 5,963 RNA–protein pairs in 62.1 ms