RNA–Protein interactions for RNA: YER112W

LSM4, Transcript of Lsm (Like Sm) protein, yeastyeast

Gene LSM4, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSM4YER112W YPR172WQ06608 200 aa2.14□□□□□ -2.07
LSM4YER112W YLR030WQ07967 263 aa2.14□□□□□ -2.07
LSM4YER112W AKR2Q12013 749 aa2.14□□□□□ -2.07
LSM4YER112W IPP1P00817 287 aaKnown RBP2.13□□□□□ -2.07
LSM4YER112W TCP1P12612 559 aaKnown RBP2.13□□□□□ -2.07
LSM4YER112W YCR102CP25608 368 aa2.13□□□□□ -2.07
LSM4YER112W SRB4P32569 687 aa2.13□□□□□ -2.07
LSM4YER112W MSA2P36157 363 aa2.13□□□□□ -2.07
LSM4YER112W FIS1P40515 155 aa2.13□□□□□ -2.07
LSM4YER112W ILM1P47155 203 aa2.13□□□□□ -2.07
LSM4YER112W DAD3P69850 94 aa2.13□□□□□ -2.07
LSM4YER112W SEI1Q06058 285 aa2.13□□□□□ -2.07
LSM4YER112W YPL257WQ08974 193 aa2.13□□□□□ -2.07
LSM4YER112W MRPL25P23369 157 aa2.12□□□□□ -2.07
LSM4YER112W YKL075CP36083 450 aa2.12□□□□□ -2.07
LSM4YER112W LIA1P47120 325 aaKnown RBP2.12□□□□□ -2.07
LSM4YER112W YNL046WP53956 172 aa2.12□□□□□ -2.07
LSM4YER112W HTL1Q9URQ5 78 aa2.12□□□□□ -2.07
LSM4YER112W COX5AP00424 153 aa2.11□□□□□ -2.07
LSM4YER112W YHR032W-AP0C5N6 59 aa2.11□□□□□ -2.07
LSM4YER112W DSF1P0CX08 502 aa2.11□□□□□ -2.07
LSM4YER112W YNR073CP0CX09 502 aa2.11□□□□□ -2.07
LSM4YER112W CUE1P38428 203 aa2.11□□□□□ -2.07
LSM4YER112W YLR283WQ05867 314 aa2.11□□□□□ -2.07
LSM4YER112W ERD2P18414 219 aa2.1□□□□□ -2.07
LSM4YER112W YCR016WP25617 290 aaKnown RBP2.1□□□□□ -2.07
LSM4YER112W DOA4P32571 926 aa2.1□□□□□ -2.07
LSM4YER112W MSN4P33749 630 aa2.1□□□□□ -2.07
LSM4YER112W YPT52P36018 234 aaKnown RBP2.1□□□□□ -2.07
LSM4YER112W YJL027CP47063 138 aaPredicted RBP2.1□□□□□ -2.07
LSM4YER112W YJR056CP47115 236 aa2.1□□□□□ -2.07
LSM4YER112W NUP84P52891 726 aa2.1□□□□□ -2.07
LSM4YER112W DCR2Q05924 578 aa2.1□□□□□ -2.07
LSM4YER112W YLR126CQ12288 251 aa2.1□□□□□ -2.07
LSM4YER112W YOR020W-AQ3E824 90 aa2.1□□□□□ -2.07
LSM4YER112W RPL9AP05738 191 aaKnown RBP2.09□□□□□ -2.07
LSM4YER112W SNA3P14359 133 aa2.09□□□□□ -2.07
LSM4YER112W VMA11P32842 164 aa2.09□□□□□ -2.07
LSM4YER112W LDB7P38210 180 aa2.09□□□□□ -2.07
LSM4YER112W DOG1P38774 246 aa2.09□□□□□ -2.07
LSM4YER112W YAR068WP39564 161 aa2.09□□□□□ -2.07
LSM4YER112W SMD3P43321 101 aaKnown RBP2.09□□□□□ -2.07
LSM4YER112W RPL9BP51401 191 aaKnown RBP2.09□□□□□ -2.07
LSM4YER112W YHR086W-AQ3E746 53 aa2.09□□□□□ -2.07
LSM4YER112W SIR4P11978 1358 aa2.09□□□□□ -2.08
LSM4YER112W MCM22P47167 239 aa2.08□□□□□ -2.08
LSM4YER112W YML108WQ03759 105 aa2.08□□□□□ -2.08
LSM4YER112W SSQ1Q05931 657 aaPredicted RBP2.08□□□□□ -2.08
LSM4YER112W ATG39Q06159 398 aa2.08□□□□□ -2.08
LSM4YER112W CFT1Q06632 1357 aaKnown RBP2.08□□□□□ -2.08
LSM4YER112W FBA1P14540 359 aaKnown RBP2.07□□□□□ -2.08
LSM4YER112W RPO26P20435 155 aa2.07□□□□□ -2.08
LSM4YER112W PEX4P29340 183 aa2.07□□□□□ -2.08
LSM4YER112W MDH3P32419 343 aaKnown RBP RIP-Chip data2.07□□□□□ -2.08not detected
LSM4YER112W RSM25P40496 264 aa2.07□□□□□ -2.08
LSM4YER112W CAT5P41735 233 aa2.07□□□□□ -2.08
LSM4YER112W BOL1Q3E793 110 aa2.07□□□□□ -2.08
LSM4YER112W RIB1P38066 345 aa2.06□□□□□ -2.08
LSM4YER112W RPF1P38805 295 aaKnown RBP2.06□□□□□ -2.08
LSM4YER112W CTR2P38865 189 aa2.06□□□□□ -2.08
LSM4YER112W FCY21P40039 528 aa2.06□□□□□ -2.08
LSM4YER112W COX15P40086 486 aa2.06□□□□□ -2.08
LSM4YER112W ABF2Q02486 183 aa2.06□□□□□ -2.08
LSM4YER112W YML096WQ04489 525 aa2.06□□□□□ -2.08
LSM4YER112W MEU1Q07938 337 aaKnown RBP RIP-Chip data2.06□□□□□ -2.08not detected
LSM4YER112W NIP7Q08962 181 aaKnown RBP2.06□□□□□ -2.08
LSM4YER112W ATO3Q12359 275 aa2.06□□□□□ -2.08
LSM4YER112W BEM2P39960 2167 aaKnown RBP2.05□□□□□ -2.08
LSM4YER112W MSW1P04803 379 aa2.05□□□□□ -2.08
LSM4YER112W VPS21P36017 210 aaKnown RBP2.05□□□□□ -2.08
LSM4YER112W RPA43P46669 326 aa2.05□□□□□ -2.08
LSM4YER112W CIS3P47001 227 aa2.05□□□□□ -2.08
LSM4YER112W BAT2P47176 376 aaKnown RBP2.05□□□□□ -2.08
LSM4YER112W NSA1P53136 463 aaPredicted RBP2.05□□□□□ -2.08
LSM4YER112W YGR219WP53307 113 aa2.05□□□□□ -2.08
LSM4YER112W MSA1Q08471 629 aa2.05□□□□□ -2.08
LSM4YER112W BCY1P07278 416 aaKnown RBP2.04□□□□□ -2.08
LSM4YER112W FCY2P17064 533 aa2.04□□□□□ -2.08
LSM4YER112W GRX2P17695 143 aaKnown RBP2.04□□□□□ -2.08
LSM4YER112W RPS5P26783 225 aaKnown RBP2.04□□□□□ -2.08
LSM4YER112W PRE6P40303 254 aaKnown RBP2.04□□□□□ -2.08
LSM4YER112W YIL001WP40560 513 aa2.04□□□□□ -2.08
LSM4YER112W RPC17P47076 161 aa2.04□□□□□ -2.08
LSM4YER112W YMD8Q03697 442 aa2.04□□□□□ -2.08
LSM4YER112W MRPS8Q03799 155 aa2.04□□□□□ -2.08
LSM4YER112W NEJ1Q06148 342 aa2.04□□□□□ -2.08
LSM4YER112W LSO2Q3E772 92 aaKnown RBP2.04□□□□□ -2.08
LSM4YER112W SPT3P06844 337 aa2.03□□□□□ -2.08
LSM4YER112W MATALPHA1P0CY06 175 aa2.03□□□□□ -2.08
LSM4YER112W HMLALPHA1P0CY07 175 aa2.03□□□□□ -2.08
LSM4YER112W CDC10P25342 322 aaKnown RBP2.03□□□□□ -2.08
LSM4YER112W YER085CP40058 173 aa2.03□□□□□ -2.08
LSM4YER112W YJR149WP47177 404 aa2.03□□□□□ -2.08
LSM4YER112W TRM9P49957 279 aa2.03□□□□□ -2.08
LSM4YER112W ERG25P53045 309 aa2.03□□□□□ -2.08
LSM4YER112W NOP13P53883 403 aaKnown RBP RIP-Chip data2.03□□□□□ -2.08not detected
LSM4YER112W DRS2P39524 1355 aa2.02□□□□□ -2.09
LSM4YER112W SCL1P21243 252 aaKnown RBP2.02□□□□□ -2.09
LSM4YER112W RPL24BP24000 155 aaKnown RBP2.02□□□□□ -2.09
LSM4YER112W OAC1P32332 324 aa2.02□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 62.6 ms