RNA–Protein interactions for RNA: YEL021W

URA3, Transcript of Orotidine-5'-phosphate (OMP) decarboxylase, yeast

Gene URA3, Length 804 nt, Biotype protein coding, Subcellular localisation Mitochondria .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
URA3	YEL021W	ASN1	P49089	572 aa	Known RBP	4.6	□□□□□ -1.67
URA3	YEL021W	ORC5	P50874	479 aa		4.6	□□□□□ -1.67
URA3	YEL021W	UBC13	P52490	153 aa		4.6	□□□□□ -1.67
URA3	YEL021W	BUD32	P53323	261 aa		4.6	□□□□□ -1.67
URA3	YEL021W	BNA5	Q05979	453 aa		4.6	□□□□□ -1.67
URA3	YEL021W	GAT3	Q07928	141 aa		4.6	□□□□□ -1.67
URA3	YEL021W	YLR030W	Q07967	263 aa		4.6	□□□□□ -1.67
URA3	YEL021W	SRL2	Q12020	392 aa		4.6	□□□□□ -1.67
URA3	YEL021W	UTP23	Q12339	254 aa	Known RBP	4.6	□□□□□ -1.67
URA3	YEL021W	YDL199C	Q12407	687 aa		4.6	□□□□□ -1.67
URA3	YEL021W	PSF1	Q12488	208 aa		4.6	□□□□□ -1.67
URA3	YEL021W	YIR021W-A	Q3E739	70 aa		4.6	□□□□□ -1.67
URA3	YEL021W	DET1	Q99288	334 aa	Known RBP	4.6	□□□□□ -1.67
URA3	YEL021W	BI3	Q9ZZW7	517 aa		4.6	□□□□□ -1.67
URA3	YEL021W	TKL1	P23254	680 aa	Known RBP	4.59	□□□□□ -1.67
URA3	YEL021W	EXG1	P23776	448 aa	Known RBP	4.59	□□□□□ -1.67
URA3	YEL021W	CLB2	P24869	491 aa		4.59	□□□□□ -1.67
URA3	YEL021W	ATG12	P38316	186 aa		4.59	□□□□□ -1.67
URA3	YEL021W	COS8	P38723	381 aa		4.59	□□□□□ -1.67
URA3	YEL021W	LSM12	P38828	187 aa	Known RBP	4.59	□□□□□ -1.67
URA3	YEL021W	NDT80	P38830	627 aa		4.59	□□□□□ -1.67
URA3	YEL021W	AIM2	P39721	246 aa		4.59	□□□□□ -1.67
URA3	YEL021W	LSM4	P40070	187 aa	Known RBP	4.59	□□□□□ -1.67
URA3	YEL021W	YMR144W	P40214	342 aa	Known RBP	4.59	□□□□□ -1.67
URA3	YEL021W	RFC2	P40348	353 aa		4.59	□□□□□ -1.67
URA3	YEL021W	MEP2	P41948	499 aa		4.59	□□□□□ -1.67
URA3	YEL021W	SER2	P42941	309 aa		4.59	□□□□□ -1.67
URA3	YEL021W	ERJ5	P43613	295 aa	Predicted RBP	4.59	□□□□□ -1.67
URA3	YEL021W	IKS1	P47042	667 aa		4.59	□□□□□ -1.67
URA3	YEL021W	COQ5	P49017	307 aa		4.59	□□□□□ -1.67
URA3	YEL021W	UBC12	P52491	188 aa		4.59	□□□□□ -1.67
URA3	YEL021W	YIP4	P53093	235 aa		4.59	□□□□□ -1.67
URA3	YEL021W	PRM8	P53174	237 aa		4.59	□□□□□ -1.67
URA3	YEL021W	PDR18	P53756	1333 aa		4.59	□□□□□ -1.67
URA3	YEL021W	BOR1	P53838	576 aa		4.59	□□□□□ -1.67
URA3	YEL021W	SWS2	P53937	143 aa		4.59	□□□□□ -1.67
URA3	YEL021W	YOL024W	Q08172	172 aa		4.59	□□□□□ -1.67
URA3	YEL021W	YLR126C	Q12288	251 aa		4.59	□□□□□ -1.67
URA3	YEL021W	ATP14	Q12349	124 aa		4.59	□□□□□ -1.67
URA3	YEL021W	ORT1	Q12375	292 aa		4.59	□□□□□ -1.67
URA3	YEL021W	ADK1	P07170	222 aa	Known RBP	4.58	□□□□□ -1.68
URA3	YEL021W	DDI2	P0CH63	225 aa		4.58	□□□□□ -1.68
URA3	YEL021W	DDI3	P0CH64	225 aa		4.58	□□□□□ -1.68
URA3	YEL021W	ERD1	P16151	362 aa		4.58	□□□□□ -1.68
URA3	YEL021W	ERD2	P18414	219 aa		4.58	□□□□□ -1.68
URA3	YEL021W	RPS2	P25443	254 aa	Known RBP	4.58	□□□□□ -1.68
URA3	YEL021W	INO2	P26798	304 aa		4.58	□□□□□ -1.68
URA3	YEL021W	APE2	P32454	952 aa	Known RBP	4.58	□□□□□ -1.68
URA3	YEL021W	AEP1	P32493	518 aa		4.58	□□□□□ -1.68
URA3	YEL021W	FRE2	P36033	711 aa		4.58	□□□□□ -1.68
URA3	YEL021W	MCR1	P36060	302 aa	Known RBP	4.58	□□□□□ -1.68
URA3	YEL021W	MRPL3	P36516	390 aa		4.58	□□□□□ -1.68
URA3	YEL021W	YBR053C	P38235	358 aa		4.58	□□□□□ -1.68
URA3	YEL021W	YPC1	P38298	316 aa		4.58	□□□□□ -1.68
URA3	YEL021W	RCK1	P38622	512 aa		4.58	□□□□□ -1.68
URA3	YEL021W	BAT1	P38891	393 aa	Known RBP	4.58	□□□□□ -1.68
URA3	YEL021W	LYS1	P38998	373 aa	RIP-Chip data	4.58	□□□□□ -1.68	not detected
URA3	YEL021W	GLE2	P40066	365 aa		4.58	□□□□□ -1.68
URA3	YEL021W	PDS1	P40316	373 aa	Predicted RBP	4.58	□□□□□ -1.68
URA3	YEL021W	YIL029C	P40538	142 aa		4.58	□□□□□ -1.68
URA3	YEL021W	YIA6	P40556	373 aa		4.58	□□□□□ -1.68
URA3	YEL021W	ELP3	Q02908	557 aa	Known RBP	4.58	□□□□□ -1.68
URA3	YEL021W	FMN1	Q03778	218 aa		4.58	□□□□□ -1.68
URA3	YEL021W	RAV2	Q03956	351 aa		4.58	□□□□□ -1.68
URA3	YEL021W	TAZ1	Q06510	381 aa		4.58	□□□□□ -1.68
URA3	YEL021W	COQ10	Q08058	207 aa		4.58	□□□□□ -1.68
URA3	YEL021W	YPL257W	Q08974	193 aa		4.58	□□□□□ -1.68
URA3	YEL021W	MDM32	Q12171	622 aa		4.58	□□□□□ -1.68
URA3	YEL021W	RFM1	Q12192	310 aa		4.58	□□□□□ -1.68
URA3	YEL021W	ERV2	Q12284	196 aa		4.58	□□□□□ -1.68
URA3	YEL021W	YOP1	Q12402	180 aa		4.58	□□□□□ -1.68
URA3	YEL021W	SPO12	P17123	173 aa		4.57	□□□□□ -1.68
URA3	YEL021W	STE4	P18851	423 aa		4.57	□□□□□ -1.68
URA3	YEL021W	SEC14	P24280	304 aa	Known RBP	4.57	□□□□□ -1.68
URA3	YEL021W	OAC1	P32332	324 aa		4.57	□□□□□ -1.68
URA3	YEL021W	PHA2	P32452	334 aa		4.57	□□□□□ -1.68
URA3	YEL021W	UTR4	P32626	227 aa		4.57	□□□□□ -1.68
URA3	YEL021W	MRPL24	P36525	258 aa	Predicted RBP	4.57	□□□□□ -1.68
URA3	YEL021W	ARC40	P38328	384 aa	Known RBP	4.57	□□□□□ -1.68
URA3	YEL021W	YHR127W	P38833	243 aa	Known RBP	4.57	□□□□□ -1.68
URA3	YEL021W	FAU1	P40099	211 aa		4.57	□□□□□ -1.68
URA3	YEL021W	SER33	P40510	469 aa		4.57	□□□□□ -1.68
URA3	YEL021W	YFL064C	P43540	174 aa		4.57	□□□□□ -1.68
URA3	YEL021W	CPR7	P47103	393 aa		4.57	□□□□□ -1.68
URA3	YEL021W	MRM2	P53123	320 aa		4.57	□□□□□ -1.68
URA3	YEL021W	APS2	Q00381	147 aa		4.57	□□□□□ -1.68
URA3	YEL021W	GPI17	Q04080	534 aa		4.57	□□□□□ -1.68
URA3	YEL021W	YDR278C	Q05612	105 aa		4.57	□□□□□ -1.68
URA3	YEL021W	YPR098C	Q06089	161 aa		4.57	□□□□□ -1.68
URA3	YEL021W	CNL1	Q06333	122 aa		4.57	□□□□□ -1.68
URA3	YEL021W	YPR202W	Q08993	238 aa		4.57	□□□□□ -1.68
URA3	YEL021W	HRT3	Q12347	344 aa		4.57	□□□□□ -1.68
URA3	YEL021W	PEX11	Q12462	236 aa		4.57	□□□□□ -1.68
URA3	YEL021W	YDL085C-A	Q3E7B7	68 aa	Known RBP	4.57	□□□□□ -1.68
URA3	YEL021W	MEX67	Q99257	599 aa	Known RBP	4.57	□□□□□ -1.68
URA3	YEL021W	YRF1-3	P0CX14	1859 aa		4.56	□□□□□ -1.68
URA3	YEL021W	YRF1-7	P0CX15	1859 aa		4.56	□□□□□ -1.68
URA3	YEL021W	YRF1-6	P53819	1859 aa		4.56	□□□□□ -1.68
URA3	YEL021W	YGL041W-A	P0C5N3	154 aa		4.56	□□□□□ -1.68
URA3	YEL021W	CAP2	P13517	287 aa		4.56	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 27.7 ms