RNA–Protein interactions for RNA: YDR484W

VPS52, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS52, Length 1,926 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS52YDR484W IPP1P00817 287 aaKnown RBP1.23□□□□□ -2.21
VPS52YDR484W FBA1P14540 359 aaKnown RBP1.23□□□□□ -2.21
VPS52YDR484W BNA6P43619 295 aa1.23□□□□□ -2.21
VPS52YDR484W LAP3Q01532 483 aaKnown RBP RIP-Chip data1.23□□□□□ -2.21not detected
VPS52YDR484W YLR173WQ06247 608 aa1.23□□□□□ -2.21
VPS52YDR484W RRT8Q08219 342 aa1.23□□□□□ -2.21
VPS52YDR484W YOR029WQ12243 111 aa1.23□□□□□ -2.21
VPS52YDR484W MED4Q12343 284 aa1.23□□□□□ -2.21
VPS52YDR484W ATO3Q12359 275 aa1.23□□□□□ -2.21
VPS52YDR484W RPL9AP05738 191 aaKnown RBP1.23□□□□□ -2.21
VPS52YDR484W PEX4P29340 183 aa1.23□□□□□ -2.21
VPS52YDR484W MDH3P32419 343 aaKnown RBP RIP-Chip data1.23□□□□□ -2.21not detected
VPS52YDR484W AYR1P40471 297 aa1.23□□□□□ -2.21
VPS52YDR484W YFR054CP43622 192 aa1.23□□□□□ -2.21
VPS52YDR484W ILM1P47155 203 aa1.23□□□□□ -2.21
VPS52YDR484W RPL9BP51401 191 aaKnown RBP1.23□□□□□ -2.21
VPS52YDR484W YNL046WP53956 172 aa1.23□□□□□ -2.21
VPS52YDR484W KRE28Q04431 385 aa1.23□□□□□ -2.21
VPS52YDR484W SEI1Q06058 285 aa1.23□□□□□ -2.21
VPS52YDR484W PAM18Q07914 168 aa1.23□□□□□ -2.21
VPS52YDR484W HTL1Q9URQ5 78 aa1.23□□□□□ -2.21
VPS52YDR484W DSF1P0CX08 502 aa1.22□□□□□ -2.21
VPS52YDR484W YNR073CP0CX09 502 aa1.22□□□□□ -2.21
VPS52YDR484W RPT5P33297 434 aaKnown RBP1.22□□□□□ -2.21
VPS52YDR484W YMR144WP40214 342 aaKnown RBP1.22□□□□□ -2.21
VPS52YDR484W HAM1P47119 197 aaKnown RBP1.22□□□□□ -2.21
VPS52YDR484W YJR079WP47126 109 aa1.22□□□□□ -2.21
VPS52YDR484W YGR219WP53307 113 aa1.22□□□□□ -2.21
VPS52YDR484W SCL1P21243 252 aaKnown RBP1.21□□□□□ -2.22
VPS52YDR484W YPT52P36018 234 aaKnown RBP1.21□□□□□ -2.22
VPS52YDR484W YKL075CP36083 450 aa1.21□□□□□ -2.22
VPS52YDR484W CTR2P38865 189 aa1.21□□□□□ -2.22
VPS52YDR484W CIS3P47001 227 aa1.21□□□□□ -2.22
VPS52YDR484W JHD2P47156 728 aaPredicted RBP1.21□□□□□ -2.22
VPS52YDR484W ERG25P53045 309 aa1.21□□□□□ -2.22
VPS52YDR484W YNL134CP53912 376 aaKnown RBP1.21□□□□□ -2.22
VPS52YDR484W MRPS8Q03799 155 aa1.21□□□□□ -2.22
VPS52YDR484W ATG39Q06159 398 aa1.21□□□□□ -2.22
VPS52YDR484W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.21□□□□□ -2.22not detected
VPS52YDR484W ATG31Q12421 196 aa1.21□□□□□ -2.22
VPS52YDR484W YOR020W-AQ3E824 90 aa1.21□□□□□ -2.22
VPS52YDR484W INO80P53115 1489 aa1.21□□□□□ -2.22
VPS52YDR484W SNA3P14359 133 aa1.21□□□□□ -2.22
VPS52YDR484W ERD2P18414 219 aa1.21□□□□□ -2.22
VPS52YDR484W YAR068WP39564 161 aa1.21□□□□□ -2.22
VPS52YDR484W LSM4P40070 187 aaKnown RBP1.21□□□□□ -2.22
VPS52YDR484W PEP8P40335 379 aa1.21□□□□□ -2.22
VPS52YDR484W YJR056CP47115 236 aa1.21□□□□□ -2.22
VPS52YDR484W HOC1P47124 396 aa1.21□□□□□ -2.22
VPS52YDR484W SRL4Q03085 281 aa1.21□□□□□ -2.22
VPS52YDR484W SIR4P11978 1358 aa1.2□□□□□ -2.22
VPS52YDR484W MSW1P04803 379 aa1.2□□□□□ -2.22
VPS52YDR484W TCP1P12612 559 aaKnown RBP1.2□□□□□ -2.22
VPS52YDR484W PHO88P38264 188 aaPredicted RBP1.2□□□□□ -2.22
VPS52YDR484W RPF1P38805 295 aaKnown RBP1.2□□□□□ -2.22
VPS52YDR484W FMC1P40491 155 aa1.2□□□□□ -2.22
VPS52YDR484W YLR126CQ12288 251 aa1.2□□□□□ -2.22
VPS52YDR484W ERV15P38312 142 aa1.19□□□□□ -2.22
VPS52YDR484W CUE1P38428 203 aa1.19□□□□□ -2.22
VPS52YDR484W VTC1P40046 129 aaRIP-Chip data1.19□□□□□ -2.22not detected
VPS52YDR484W RSM25P40496 264 aa1.19□□□□□ -2.22
VPS52YDR484W YIL001WP40560 513 aa1.19□□□□□ -2.22
VPS52YDR484W RRN5Q02983 363 aa1.19□□□□□ -2.22
VPS52YDR484W SSQ1Q05931 657 aaPredicted RBP1.19□□□□□ -2.22
VPS52YDR484W NEJ1Q06148 342 aa1.19□□□□□ -2.22
VPS52YDR484W NIP7Q08962 181 aaKnown RBP1.19□□□□□ -2.22
VPS52YDR484W RAS2P01120 322 aaKnown RBP1.19□□□□□ -2.22
VPS52YDR484W GRX2P17695 143 aaKnown RBP1.19□□□□□ -2.22
VPS52YDR484W MRPL25P23369 157 aa1.19□□□□□ -2.22
VPS52YDR484W OAC1P32332 324 aa1.19□□□□□ -2.22
VPS52YDR484W BMT5P40493 336 aa1.19□□□□□ -2.22
VPS52YDR484W YKE4P40544 346 aa1.19□□□□□ -2.22
VPS52YDR484W CAT5P41735 233 aa1.19□□□□□ -2.22
VPS52YDR484W NUP84P52891 726 aa1.19□□□□□ -2.22
VPS52YDR484W ABF2Q02486 183 aa1.19□□□□□ -2.22
VPS52YDR484W YML108WQ03759 105 aa1.19□□□□□ -2.22
VPS52YDR484W USB1Q12208 290 aaKnown RBP1.19□□□□□ -2.22
VPS52YDR484W FCY2P17064 533 aa1.18□□□□□ -2.22
VPS52YDR484W MDH2P22133 377 aa1.18□□□□□ -2.22
VPS52YDR484W RPS5P26783 225 aaKnown RBP1.18□□□□□ -2.22
VPS52YDR484W SRB4P32569 687 aa1.18□□□□□ -2.22
VPS52YDR484W YHR022CP38763 256 aa1.18□□□□□ -2.22
VPS52YDR484W DSE2P38844 325 aa1.18□□□□□ -2.22
VPS52YDR484W RPA43P46669 326 aa1.18□□□□□ -2.22
VPS52YDR484W CYT2Q00873 224 aa1.18□□□□□ -2.22
VPS52YDR484W YML096WQ04489 525 aa1.18□□□□□ -2.22
VPS52YDR484W ARR2Q06597 130 aa1.18□□□□□ -2.22
VPS52YDR484W HEM25Q07534 307 aa1.18□□□□□ -2.22
VPS52YDR484W MSA1Q08471 629 aa1.18□□□□□ -2.22
VPS52YDR484W TPO4Q12256 659 aa1.18□□□□□ -2.22
VPS52YDR484W CDC7P06243 507 aa1.17□□□□□ -2.22
VPS52YDR484W RIB1P38066 345 aa1.17□□□□□ -2.22
VPS52YDR484W YBR063CP38083 404 aa1.17□□□□□ -2.22
VPS52YDR484W ECM33P38248 429 aaKnown RBP1.17□□□□□ -2.22
VPS52YDR484W PRM10P42946 383 aa1.17□□□□□ -2.22
VPS52YDR484W MCM22P47167 239 aa1.17□□□□□ -2.22
VPS52YDR484W YCR016WP25617 290 aaKnown RBP1.17□□□□□ -2.22
VPS52YDR484W PET117Q02771 107 aa1.17□□□□□ -2.22
VPS52YDR484W YLR283WQ05867 314 aa1.17□□□□□ -2.22
VPS52YDR484W DDI2P0CH63 225 aa1.16□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 130.3 ms