RNA–Protein interactions for RNA: YDR393W

SHE9, Transcript of Protein required for normal mitochondrial morphology, yeast

Gene SHE9, Length 1,371 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SHE9	YDR393W	TAD2	P47058	250 aa		1.29	□□□□□ -2.2
SHE9	YDR393W	YNL260C	P53846	198 aa		1.29	□□□□□ -2.2
SHE9	YDR393W	SPO19	Q03029	223 aa		1.29	□□□□□ -2.2
SHE9	YDR393W	SDC1	Q03323	175 aa		1.29	□□□□□ -2.2
SHE9	YDR393W	SEC10	Q06245	871 aa		1.29	□□□□□ -2.2
SHE9	YDR393W	PER33	Q12144	273 aa		1.29	□□□□□ -2.2
SHE9	YDR393W	NOT5	Q12514	560 aa	Predicted RBP	1.29	□□□□□ -2.2
SHE9	YDR393W	MOT1	P32333	1867 aa		1.29	□□□□□ -2.2
SHE9	YDR393W	HAP2	P06774	265 aa		1.28	□□□□□ -2.2
SHE9	YDR393W	RPL4A	P10664	362 aa	Known RBP	1.28	□□□□□ -2.2
SHE9	YDR393W	PEX3	P28795	441 aa		1.28	□□□□□ -2.2
SHE9	YDR393W	SRX1	P36077	127 aa		1.28	□□□□□ -2.2
SHE9	YDR393W	TEM1	P38987	245 aa		1.28	□□□□□ -2.2
SHE9	YDR393W	NPT1	P39683	429 aa	Known RBP	1.28	□□□□□ -2.2
SHE9	YDR393W	GON7	P46984	123 aa		1.28	□□□□□ -2.2
SHE9	YDR393W	RPL4B	P49626	362 aa	Known RBP	1.28	□□□□□ -2.2
SHE9	YDR393W	LSB1	P53281	241 aa		1.28	□□□□□ -2.2
SHE9	YDR393W	YMR114C	Q04471	368 aa	Known RBP	1.28	□□□□□ -2.2
SHE9	YDR393W	SFH1	Q06168	426 aa		1.28	□□□□□ -2.2
SHE9	YDR393W	EMC6	Q12431	108 aa		1.28	□□□□□ -2.2
SHE9	YDR393W	YIL046W-A	Q3E7Z4	54 aa		1.28	□□□□□ -2.2
SHE9	YDR393W	LAA1	P39526	2014 aa		1.28	□□□□□ -2.2
SHE9	YDR393W	RAD3	P06839	778 aa		1.27	□□□□□ -2.21
SHE9	YDR393W	MSF1	P08425	469 aa		1.27	□□□□□ -2.21
SHE9	YDR393W	RNP1	P32385	249 aa		1.27	□□□□□ -2.21
SHE9	YDR393W	GRE3	P38715	327 aa	Known RBP RIP-Chip data	1.27	□□□□□ -2.21	not detected
SHE9	YDR393W	TIF34	P40217	347 aa	Known RBP	1.27	□□□□□ -2.21
SHE9	YDR393W	PNC1	P53184	216 aa	Known RBP	1.27	□□□□□ -2.21
SHE9	YDR393W	TIM21	P53220	239 aa		1.27	□□□□□ -2.21
SHE9	YDR393W	SLX9	P53251	210 aa	Predicted RBP	1.27	□□□□□ -2.21
SHE9	YDR393W	ERV41	Q04651	352 aa		1.27	□□□□□ -2.21
SHE9	YDR393W	LOA1	Q06508	300 aa		1.27	□□□□□ -2.21
SHE9	YDR393W	PST1	Q12355	444 aa		1.27	□□□□□ -2.21
SHE9	YDR393W	YOS9	Q99220	542 aa		1.27	□□□□□ -2.21
SHE9	YDR393W	TRA1	P38811	3744 aa		1.26	□□□□□ -2.21
SHE9	YDR393W	RPC40	P07703	335 aa	Known RBP	1.26	□□□□□ -2.21
SHE9	YDR393W	FPR1	P20081	114 aa	Known RBP	1.26	□□□□□ -2.21
SHE9	YDR393W	YSR3	P23501	404 aa		1.26	□□□□□ -2.21
SHE9	YDR393W	YCL042W	P25572	119 aa		1.26	□□□□□ -2.21
SHE9	YDR393W	MAL32	P38158	584 aa		1.26	□□□□□ -2.21
SHE9	YDR393W	AGX1	P43567	385 aa		1.26	□□□□□ -2.21
SHE9	YDR393W	MRX5	P47007	382 aa		1.26	□□□□□ -2.21
SHE9	YDR393W	MAL12	P53341	584 aa		1.26	□□□□□ -2.21
SHE9	YDR393W	ARP5	P53946	755 aa		1.26	□□□□□ -2.21
SHE9	YDR393W	VBA1	Q04301	562 aa		1.26	□□□□□ -2.21
SHE9	YDR393W	DCR2	Q05924	578 aa		1.26	□□□□□ -2.21
SHE9	YDR393W	BOP2	Q06150	570 aa		1.26	□□□□□ -2.21
SHE9	YDR393W	SLD7	Q08457	257 aa		1.26	□□□□□ -2.21
SHE9	YDR393W	YRA1	Q12159	226 aa	Known RBP	1.26	□□□□□ -2.21
SHE9	YDR393W	YPL247C	Q12523	523 aa		1.26	□□□□□ -2.21
SHE9	YDR393W	YHR086W-A	Q3E746	53 aa		1.26	□□□□□ -2.21
SHE9	YDR393W	YIL002W-A	Q3E7Z5	69 aa		1.26	□□□□□ -2.21
SHE9	YDR393W	IPP1	P00817	287 aa	Known RBP	1.25	□□□□□ -2.21
SHE9	YDR393W	FRS2	P15625	503 aa	Known RBP	1.25	□□□□□ -2.21
SHE9	YDR393W	MAK31	P23059	88 aa		1.25	□□□□□ -2.21
SHE9	YDR393W	GDH2	P33327	1092 aa	Known RBP	1.25	□□□□□ -2.21
SHE9	YDR393W	ERG10	P41338	398 aa	Known RBP	1.25	□□□□□ -2.21
SHE9	YDR393W	YJL028W	P47062	111 aa		1.25	□□□□□ -2.21
SHE9	YDR393W	ALG11	P53954	548 aa	Known RBP	1.25	□□□□□ -2.21
SHE9	YDR393W	SMD2	Q06217	110 aa	Known RBP	1.25	□□□□□ -2.21
SHE9	YDR393W	GEP5	Q12393	293 aa		1.25	□□□□□ -2.21
SHE9	YDR393W	NCB2	Q92317	146 aa		1.25	□□□□□ -2.21
SHE9	YDR393W	AI5_BETA	Q9ZZX0	354 aa		1.25	□□□□□ -2.21
SHE9	YDR393W	COS2	P0CX12	379 aa		1.24	□□□□□ -2.21
SHE9	YDR393W	COS3	P0CX13	379 aa		1.24	□□□□□ -2.21
SHE9	YDR393W	MEK1	P24719	497 aa	Predicted RBP	1.24	□□□□□ -2.21
SHE9	YDR393W	YOR062C	P36025	268 aa		1.24	□□□□□ -2.21
SHE9	YDR393W	LSM4	P40070	187 aa	Known RBP	1.24	□□□□□ -2.21
SHE9	YDR393W	SER33	P40510	469 aa		1.24	□□□□□ -2.21
SHE9	YDR393W	CIS3	P47001	227 aa		1.24	□□□□□ -2.21
SHE9	YDR393W	MDM34	P53083	459 aa		1.24	□□□□□ -2.21
SHE9	YDR393W	CAB4	P53332	305 aa		1.24	□□□□□ -2.21
SHE9	YDR393W	ATC1	Q04005	294 aa		1.24	□□□□□ -2.21
SHE9	YDR393W	PDR18	P53756	1333 aa		1.24	□□□□□ -2.21
SHE9	YDR393W	PPH21	P23594	369 aa		1.23	□□□□□ -2.21
SHE9	YDR393W	POF1	P25576	258 aa		1.23	□□□□□ -2.21
SHE9	YDR393W	CWP1	P28319	239 aa		1.23	□□□□□ -2.21
SHE9	YDR393W	SCM4	P32564	187 aa		1.23	□□□□□ -2.21
SHE9	YDR393W	MRPL40	P36534	297 aa		1.23	□□□□□ -2.21
SHE9	YDR393W	MRX3	P38172	270 aa		1.23	□□□□□ -2.21
SHE9	YDR393W	HSM3	P38348	480 aa		1.23	□□□□□ -2.21
SHE9	YDR393W	PRM9	P39551	298 aa		1.23	□□□□□ -2.21
SHE9	YDR393W	FCY21	P40039	528 aa		1.23	□□□□□ -2.21
SHE9	YDR393W	FIS1	P40515	155 aa		1.23	□□□□□ -2.21
SHE9	YDR393W	GCD14	P46959	383 aa	Predicted RBP	1.23	□□□□□ -2.21
SHE9	YDR393W	YJL118W	P47022	219 aa		1.23	□□□□□ -2.21
SHE9	YDR393W	YGL185C	P53100	379 aa		1.23	□□□□□ -2.21
SHE9	YDR393W	AAH1	P53909	347 aa		1.23	□□□□□ -2.21
SHE9	YDR393W	CWC21	Q03375	135 aa	Known RBP	1.23	□□□□□ -2.21
SHE9	YDR393W	PEX12	Q04370	399 aa		1.23	□□□□□ -2.21
SHE9	YDR393W	PEX10	Q05568	337 aa		1.23	□□□□□ -2.21
SHE9	YDR393W	YLR413W	Q06689	675 aa		1.23	□□□□□ -2.21
SHE9	YDR393W	SAS5	Q99314	248 aa		1.23	□□□□□ -2.21
SHE9	YDR393W	PUT1	P09368	476 aa		1.22	□□□□□ -2.21
SHE9	YDR393W	DAL82	P21705	255 aa		1.22	□□□□□ -2.21
SHE9	YDR393W	VPS3	P23643	1011 aa		1.22	□□□□□ -2.21
SHE9	YDR393W	YCR102C	P25608	368 aa		1.22	□□□□□ -2.21
SHE9	YDR393W	YHL049C	P38722	271 aa		1.22	□□□□□ -2.21
SHE9	YDR393W	GAA1	P39012	614 aa		1.22	□□□□□ -2.21
SHE9	YDR393W	YFR054C	P43622	192 aa		1.22	□□□□□ -2.21

Retrieved 100 of 5,963 RNA–protein pairs in 137.8 ms