RNA–Protein interactions for RNA: YDR164C

SEC1, Transcript of Sm-like protein involved in docking and fusion of exocytic vesicles, yeast

Gene SEC1, Length 2,175 nt, Biotype protein coding, Subcellular localisation Cellular bud .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC1	YDR164C	AYR1	P40471	297 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	YGR201C	P42936	225 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	AGX1	P43567	385 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	LOC1	P43586	204 aa	Predicted RBP	0.69	□□□□□ -2.3
SEC1	YDR164C	YFR018C	P43599	363 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	BUD13	P46947	266 aa	Predicted RBP	0.69	□□□□□ -2.3
SEC1	YDR164C	MCM22	P47167	239 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	RAD17	P48581	401 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	AVT4	P50944	713 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	DOC1	P53068	250 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	MPC1	P53157	130 aa	Known RBP	0.69	□□□□□ -2.3
SEC1	YDR164C	FMP48	P53233	369 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	TPC1	P53257	314 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	GOR1	P53839	350 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	0.69	□□□□□ -2.3	not detected
SEC1	YDR164C	VHS1	Q03785	461 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	RVB1	Q03940	463 aa	Known RBP	0.69	□□□□□ -2.3
SEC1	YDR164C	TSA2	Q04120	196 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	ECM18	Q04623	453 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	COX20	Q04935	205 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	RNH202	Q05635	350 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	YLR173W	Q06247	608 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	MFG1	Q07684	458 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	RRT7	Q07829	113 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	FDH1	Q08911	376 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	YOR283W	Q12040	230 aa	Known RBP	0.69	□□□□□ -2.3
SEC1	YDR164C	BTS1	Q12051	335 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	GET4	Q12125	312 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	YDL009C	Q12210	107 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	GTT2	Q12390	233 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	PRP46	Q12417	451 aa	Predicted RBP	0.69	□□□□□ -2.3
SEC1	YDR164C	APC2	Q12440	853 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	AIM45	Q12480	344 aa	Known RBP	0.69	□□□□□ -2.3
SEC1	YDR164C	PSF1	Q12488	208 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	YDL012C	Q12489	107 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	FMP16	Q12497	93 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	SPO24	Q3E752	67 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	YCL012C	Q8J0M4	134 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	POL2	P21951	2222 aa	Known RBP	0.69	□□□□□ -2.3
SEC1	YDR164C	RIF1	P29539	1916 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	CAR2	P07991	424 aa	Known RBP	0.69	□□□□□ -2.3
SEC1	YDR164C	DSF1	P0CX08	502 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	YNR073C	P0CX09	502 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	ARF1	P11076	181 aa	Known RBP	0.69	□□□□□ -2.3
SEC1	YDR164C	SEN2	P16658	377 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	IFM1	P25038	676 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	SLM5	P25345	492 aa	Known RBP	0.69	□□□□□ -2.3
SEC1	YDR164C	YCR102C	P25608	368 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	BUD23	P25627	275 aa	Predicted RBP	0.69	□□□□□ -2.3
SEC1	YDR164C	RPL5	P26321	297 aa	Known RBP	0.69	□□□□□ -2.3
SEC1	YDR164C	CWP1	P28319	239 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	ATS1	P31386	333 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	ACB1	P31787	87 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	MSK1	P32048	576 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	GLC7	P32598	312 aa	Known RBP	0.69	□□□□□ -2.3
SEC1	YDR164C	MRPL6	P32904	214 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	SUI1	P32911	108 aa	Known RBP	0.69	□□□□□ -2.3
SEC1	YDR164C	SPO23	P33757	523 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	RPS27A	P35997	82 aa	Known RBP	0.69	□□□□□ -2.3
SEC1	YDR164C	SHE2	P36068	246 aa	Known RBP RIP-Chip data	0.69	□□□□□ -2.3	not detected
SEC1	YDR164C	SOL2	P37262	315 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	HMT1	P38074	348 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	YBR063C	P38083	404 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	RIB5	P38145	238 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	PAU24	P38155	120 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	MAL32	P38158	584 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	YBR242W	P38331	238 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	MTC4	P38335	694 aa	Known RBP	0.69	□□□□□ -2.3
SEC1	YDR164C	RPS27B	P38711	82 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	YHR180W	P38868	163 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	CHL4	P38907	458 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	ALP1	P38971	573 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	MNN9	P39107	395 aa	Known RBP	0.69	□□□□□ -2.3
SEC1	YDR164C	YER184C	P39961	794 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	HEM14	P40012	539 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	SPO73	P40031	143 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	MMF1	P40185	145 aa	Known RBP	0.69	□□□□□ -2.3
SEC1	YDR164C	HUA1	P40325	198 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	MOB1	P40484	314 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	UTP25	P40498	721 aa	Known RBP	0.69	□□□□□ -2.3
SEC1	YDR164C	RPR2	P40571	144 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	YIR035C	P40579	254 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	BLM10	P43583	2143 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	CIN2	P46670	268 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	MNN5	P46982	586 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	TAD2	P47058	250 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	BIR1	P47134	954 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	ADO1	P47143	340 aa	Known RBP	0.69	□□□□□ -2.3
SEC1	YDR164C	ABM1	P47146	123 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	YJR141W	P47172	347 aa	Predicted RBP	0.69	□□□□□ -2.3
SEC1	YDR164C	SNN1	P48232	102 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	NUP57	P48837	541 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	RIB4	P50861	169 aa	Predicted RBP	0.69	□□□□□ -2.3
SEC1	YDR164C	YGR026W	P53217	278 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	ORM1	P53224	222 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	VHT1	P53241	593 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	RSM27	P53305	110 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	MAL12	P53341	584 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	YNR048W	P53740	393 aa		0.69	□□□□□ -2.3
SEC1	YDR164C	LSM7	P53905	115 aa	Known RBP	0.69	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 49.4 ms