RNA–Protein interactions for RNA: YDR126W

SWF1, Transcript of Palmitoyltransferase that acts on transmembrane proteins, yeast

Gene SWF1, Length 1,011 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWF1	YDR126W	YER085C	P40058	173 aa		0.67	□□□□□ -2.3
SWF1	YDR126W	GLE2	P40066	365 aa		0.67	□□□□□ -2.3
SWF1	YDR126W	YER189W	P40104	122 aa		0.67	□□□□□ -2.3
SWF1	YDR126W	YMR144W	P40214	342 aa	Known RBP	0.67	□□□□□ -2.3
SWF1	YDR126W	MCM22	P47167	239 aa		0.67	□□□□□ -2.3
SWF1	YDR126W	NBP35	P52920	328 aa		0.67	□□□□□ -2.3
SWF1	YDR126W	MDM34	P53083	459 aa		0.67	□□□□□ -2.3
SWF1	YDR126W	NSA1	P53136	463 aa	Predicted RBP	0.67	□□□□□ -2.3
SWF1	YDR126W	MAL12	P53341	584 aa		0.67	□□□□□ -2.3
SWF1	YDR126W	DID2	P69771	204 aa		0.67	□□□□□ -2.3
SWF1	YDR126W	RHO3	Q00245	231 aa	Known RBP	0.67	□□□□□ -2.3
SWF1	YDR126W	YMD8	Q03697	442 aa		0.67	□□□□□ -2.3
SWF1	YDR126W	OST6	Q03723	332 aa		0.67	□□□□□ -2.3
SWF1	YDR126W	SPG4	Q04438	115 aa		0.67	□□□□□ -2.3
SWF1	YDR126W	YMR226C	Q05016	267 aa	Known RBP	0.67	□□□□□ -2.3
SWF1	YDR126W	LOA1	Q06508	300 aa		0.67	□□□□□ -2.3
SWF1	YDR126W	RRT8	Q08219	342 aa		0.67	□□□□□ -2.3
SWF1	YDR126W	MSH5	Q12175	901 aa		0.67	□□□□□ -2.3
SWF1	YDR126W	YOL107W	Q12239	342 aa		0.67	□□□□□ -2.3
SWF1	YDR126W	YPL119C-A	Q3E751	87 aa		0.67	□□□□□ -2.3
SWF1	YDR126W	YBL008W-A	Q3E821	79 aa		0.67	□□□□□ -2.3
SWF1	YDR126W	INO80	P53115	1489 aa		0.67	□□□□□ -2.3
SWF1	YDR126W	IPP1	P00817	287 aa	Known RBP	0.66	□□□□□ -2.3
SWF1	YDR126W	SPT3	P06844	337 aa		0.66	□□□□□ -2.3
SWF1	YDR126W	NHP6B	P11633	99 aa	Known RBP	0.66	□□□□□ -2.3
SWF1	YDR126W	POL30	P15873	258 aa	Known RBP	0.66	□□□□□ -2.3
SWF1	YDR126W	SCL1	P21243	252 aa	Known RBP	0.66	□□□□□ -2.3
SWF1	YDR126W	QRI5	P32344	111 aa		0.66	□□□□□ -2.3
SWF1	YDR126W	YPT52	P36018	234 aa	Known RBP	0.66	□□□□□ -2.3
SWF1	YDR126W	JEN1	P36035	616 aa		0.66	□□□□□ -2.3
SWF1	YDR126W	ECM13	P38195	257 aa		0.66	□□□□□ -2.3
SWF1	YDR126W	YBR220C	P38318	560 aa		0.66	□□□□□ -2.3
SWF1	YDR126W	BIG1	P38813	335 aa		0.66	□□□□□ -2.3
SWF1	YDR126W	FIS1	P40515	155 aa		0.66	□□□□□ -2.3
SWF1	YDR126W	ARC15	P40518	154 aa	RIP-Chip data	0.66	□□□□□ -2.3	not detected
SWF1	YDR126W	OST2	P46964	130 aa		0.66	□□□□□ -2.3
SWF1	YDR126W	YJR056C	P47115	236 aa		0.66	□□□□□ -2.3
SWF1	YDR126W	PRM8	P53174	237 aa		0.66	□□□□□ -2.3
SWF1	YDR126W	PGA2	P53903	129 aa		0.66	□□□□□ -2.3
SWF1	YDR126W	FYV6	P53913	173 aa		0.66	□□□□□ -2.3
SWF1	YDR126W	SWS2	P53937	143 aa		0.66	□□□□□ -2.3
SWF1	YDR126W	MRPS17	Q03246	237 aa	Predicted RBP	0.66	□□□□□ -2.3
SWF1	YDR126W	BNA7	Q04066	261 aa		0.66	□□□□□ -2.3
SWF1	YDR126W	ARV1	Q06541	321 aa		0.66	□□□□□ -2.3
SWF1	YDR126W	HEM25	Q07534	307 aa		0.66	□□□□□ -2.3
SWF1	YDR126W	YPL257W	Q08974	193 aa		0.66	□□□□□ -2.3
SWF1	YDR126W	ATG31	Q12421	196 aa		0.66	□□□□□ -2.3
SWF1	YDR126W	YOR020W-A	Q3E824	90 aa		0.66	□□□□□ -2.3
SWF1	YDR126W	HTL1	Q9URQ5	78 aa		0.66	□□□□□ -2.3
SWF1	YDR126W	DRS2	P39524	1355 aa		0.66	□□□□□ -2.3
SWF1	YDR126W	RPL9A	P05738	191 aa	Known RBP	0.65	□□□□□ -2.31
SWF1	YDR126W	BCY1	P07278	416 aa	Known RBP	0.65	□□□□□ -2.31
SWF1	YDR126W	YBR121C-A	P0C5L4	52 aa		0.65	□□□□□ -2.31
SWF1	YDR126W	STE18	P18852	110 aa		0.65	□□□□□ -2.31
SWF1	YDR126W	RCN1	P36054	211 aa		0.65	□□□□□ -2.31
SWF1	YDR126W	SKG1	P36169	355 aa		0.65	□□□□□ -2.31
SWF1	YDR126W	GOS1	P38736	223 aa		0.65	□□□□□ -2.31
SWF1	YDR126W	DOG1	P38774	246 aa		0.65	□□□□□ -2.31
SWF1	YDR126W	TRM5	P38793	499 aa		0.65	□□□□□ -2.31
SWF1	YDR126W	YAR068W	P39564	161 aa		0.65	□□□□□ -2.31
SWF1	YDR126W	SMB1	P40018	196 aa	Known RBP	0.65	□□□□□ -2.31
SWF1	YDR126W	RTR1	P40084	226 aa	Predicted RBP	0.65	□□□□□ -2.31
SWF1	YDR126W	SER33	P40510	469 aa		0.65	□□□□□ -2.31
SWF1	YDR126W	OTU1	P43558	301 aa		0.65	□□□□□ -2.31
SWF1	YDR126W	IRC18	P47056	224 aa		0.65	□□□□□ -2.31
SWF1	YDR126W	YJL028W	P47062	111 aa		0.65	□□□□□ -2.31
SWF1	YDR126W	RPC17	P47076	161 aa		0.65	□□□□□ -2.31
SWF1	YDR126W	HOC1	P47124	396 aa		0.65	□□□□□ -2.31
SWF1	YDR126W	YJR079W	P47126	109 aa		0.65	□□□□□ -2.31
SWF1	YDR126W	JHD2	P47156	728 aa	Predicted RBP	0.65	□□□□□ -2.31
SWF1	YDR126W	MIC26	P50087	233 aa		0.65	□□□□□ -2.31
SWF1	YDR126W	RPL9B	P51401	191 aa	Known RBP	0.65	□□□□□ -2.31
SWF1	YDR126W	BRR6	P53062	197 aa		0.65	□□□□□ -2.31
SWF1	YDR126W	GTR2	P53290	341 aa		0.65	□□□□□ -2.31
SWF1	YDR126W	YNL134C	P53912	376 aa	Known RBP	0.65	□□□□□ -2.31
SWF1	YDR126W	YML096W	Q04489	525 aa		0.65	□□□□□ -2.31
SWF1	YDR126W	RNH1	Q04740	348 aa		0.65	□□□□□ -2.31
SWF1	YDR126W	CDC123	Q05791	360 aa		0.65	□□□□□ -2.31
SWF1	YDR126W	SEI1	Q06058	285 aa		0.65	□□□□□ -2.31
SWF1	YDR126W	COQ10	Q08058	207 aa		0.65	□□□□□ -2.31
SWF1	YDR126W	YOR186W	Q08560	144 aa		0.65	□□□□□ -2.31
SWF1	YDR126W	EMP46	Q12396	444 aa		0.65	□□□□□ -2.31
SWF1	YDR126W	THP2	O13539	261 aa	Known RBP	0.64	□□□□□ -2.31
SWF1	YDR126W	RPL28	P02406	149 aa	Known RBP	0.64	□□□□□ -2.31
SWF1	YDR126W	RPP0	P05317	312 aa	Known RBP	0.64	□□□□□ -2.31
SWF1	YDR126W	SNA3	P14359	133 aa		0.64	□□□□□ -2.31
SWF1	YDR126W	COQ1	P18900	473 aa		0.64	□□□□□ -2.31
SWF1	YDR126W	MDH2	P22133	377 aa		0.64	□□□□□ -2.31
SWF1	YDR126W	SEC22	P22214	214 aa		0.64	□□□□□ -2.31
SWF1	YDR126W	CDC10	P25342	322 aa	Known RBP	0.64	□□□□□ -2.31
SWF1	YDR126W	PBN1	P25580	416 aa		0.64	□□□□□ -2.31
SWF1	YDR126W	IDH1	P28834	360 aa	Known RBP RIP-Chip data	0.64	□□□□□ -2.31	not detected
SWF1	YDR126W	PEX4	P29340	183 aa		0.64	□□□□□ -2.31
SWF1	YDR126W	MGM101	P32787	269 aa	Known RBP	0.64	□□□□□ -2.31
SWF1	YDR126W	VMA11	P32842	164 aa		0.64	□□□□□ -2.31
SWF1	YDR126W	YKL075C	P36083	450 aa		0.64	□□□□□ -2.31
SWF1	YDR126W	ECM4	P36156	370 aa		0.64	□□□□□ -2.31
SWF1	YDR126W	LDB7	P38210	180 aa		0.64	□□□□□ -2.31
SWF1	YDR126W	VTC1	P40046	129 aa	RIP-Chip data	0.64	□□□□□ -2.31	not detected
SWF1	YDR126W	BMT5	P40493	336 aa		0.64	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 79.9 ms