RNA–Protein interactions for RNA: YDL164C

CDC9, Transcript of DNA ligase found in the nucleus and mitochondria, yeastyeast

Gene CDC9, Length 2,268 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC9YDL164C RPS18BP0CX56 146 aaPredicted RBP3.61□□□□□ -1.83
CDC9YDL164C GCN3P14741 305 aa3.61□□□□□ -1.83
CDC9YDL164C YNK1P36010 153 aaKnown RBP3.61□□□□□ -1.83
CDC9YDL164C CAF4P36130 643 aa3.61□□□□□ -1.83
CDC9YDL164C YIL024CP40543 189 aa3.61□□□□□ -1.83
CDC9YDL164C YGL204CP53089 101 aa3.61□□□□□ -1.83
CDC9YDL164C YNL184CP53876 108 aa3.61□□□□□ -1.83
CDC9YDL164C YMR254CQ04838 102 aa3.61□□□□□ -1.83
CDC9YDL164C YOL160WQ08321 113 aa3.61□□□□□ -1.83
CDC9YDL164C RPN8Q08723 338 aaKnown RBP3.61□□□□□ -1.83
CDC9YDL164C YAL063C-AQ3E791 96 aa3.61□□□□□ -1.83
CDC9YDL164C MOH1P38191 138 aa3.6□□□□□ -1.83
CDC9YDL164C TRM7P38238 310 aaKnown RBP3.6□□□□□ -1.83
CDC9YDL164C DOG1P38774 246 aa3.6□□□□□ -1.83
CDC9YDL164C YFL064CP43540 174 aa3.6□□□□□ -1.83
CDC9YDL164C BXI1P48558 297 aa3.6□□□□□ -1.83
CDC9YDL164C HST4P53688 370 aa3.6□□□□□ -1.83
CDC9YDL164C YPR202WQ08993 238 aa3.6□□□□□ -1.83
CDC9YDL164C YLR050CQ12155 161 aaKnown RBP3.6□□□□□ -1.83
CDC9YDL164C TY2B-LR1P0C2J3 1770 aa3.6□□□□□ -1.83
CDC9YDL164C TY2B-FP0CX63 1770 aa3.6□□□□□ -1.83
CDC9YDL164C TY2B-GR2P0CX64 1770 aa3.6□□□□□ -1.83
CDC9YDL164C TY2B-CP25384 1770 aa3.6□□□□□ -1.83
CDC9YDL164C TY2B-DR2Q03494 1770 aa3.6□□□□□ -1.83
CDC9YDL164C TY1B-DR1Q03855 1755 aa3.6□□□□□ -1.83
CDC9YDL164C TY2B-DR3Q07791 1770 aaKnown RBP3.6□□□□□ -1.83
CDC9YDL164C TY2B-OR1Q12113 1770 aa3.6□□□□□ -1.83
CDC9YDL164C TY2B-DR1Q12472 1770 aa3.6□□□□□ -1.83
CDC9YDL164C TY2B-OR2Q12501 1770 aa3.6□□□□□ -1.83
CDC9YDL164C RPS8AP0CX39 200 aaKnown RBP3.6□□□□□ -1.83
CDC9YDL164C RPS8BP0CX40 200 aaKnown RBP3.6□□□□□ -1.83
CDC9YDL164C URE2P23202 354 aaKnown RBP3.6□□□□□ -1.83
CDC9YDL164C TRS20P38334 175 aa3.6□□□□□ -1.83
CDC9YDL164C CFD1P40558 293 aa3.6□□□□□ -1.83
CDC9YDL164C SNX4P47057 423 aa3.6□□□□□ -1.83
CDC9YDL164C IDP3P53982 420 aaKnown RBP3.6□□□□□ -1.83
CDC9YDL164C HRT3Q12347 344 aa3.6□□□□□ -1.83
CDC9YDL164C PCL9Q12477 304 aa3.6□□□□□ -1.83
CDC9YDL164C AIM17P23180 465 aaKnown RBP3.59□□□□□ -1.83
CDC9YDL164C DRE2P36152 348 aa3.59□□□□□ -1.83
CDC9YDL164C SHE3P38272 425 aaKnown RBP3.59□□□□□ -1.83
CDC9YDL164C MOB2P43563 287 aa3.59□□□□□ -1.83
CDC9YDL164C AIM25P47140 327 aa3.59□□□□□ -1.83
CDC9YDL164C SHY1P53266 389 aa3.59□□□□□ -1.83
CDC9YDL164C YPL113CQ02961 396 aa3.59□□□□□ -1.83
CDC9YDL164C YLR036CQ07986 203 aa3.59□□□□□ -1.83
CDC9YDL164C EFG1Q3E705 233 aaKnown RBP3.59□□□□□ -1.83
CDC9YDL164C HAP1P0CE41 1502 aa3.59□□□□□ -1.83
CDC9YDL164C SNF2P22082 1703 aa3.59□□□□□ -1.84
CDC9YDL164C TY2B-BQ12491 1770 aa3.59□□□□□ -1.84
CDC9YDL164C ARN2P38724 620 aa3.59□□□□□ -1.84
CDC9YDL164C COX14P39103 70 aa3.59□□□□□ -1.84
CDC9YDL164C SOL1P50278 321 aa3.59□□□□□ -1.84
CDC9YDL164C ADD37Q03233 198 aa3.59□□□□□ -1.84
CDC9YDL164C TSA2Q04120 196 aa3.59□□□□□ -1.84
CDC9YDL164C DYN3Q04949 312 aa3.59□□□□□ -1.84
CDC9YDL164C YHR214C-EQ8TGK0 99 aa3.59□□□□□ -1.84
CDC9YDL164C TRP1P00912 224 aa3.58□□□□□ -1.84
CDC9YDL164C AAT2P23542 418 aaKnown RBP3.58□□□□□ -1.84
CDC9YDL164C SFK1P35735 353 aa3.58□□□□□ -1.84
CDC9YDL164C UBP5P39944 805 aa3.58□□□□□ -1.84
CDC9YDL164C MRH4P53166 561 aa3.58□□□□□ -1.84
CDC9YDL164C SDS23P53172 527 aa3.58□□□□□ -1.84
CDC9YDL164C WSC2P53832 503 aa3.58□□□□□ -1.84
CDC9YDL164C YMR010WQ03687 405 aa3.58□□□□□ -1.84
CDC9YDL164C FDH1Q08911 376 aa3.58□□□□□ -1.84
CDC9YDL164C ATX2Q12067 313 aa3.58□□□□□ -1.84
CDC9YDL164C IGO2Q9P305 131 aa3.58□□□□□ -1.84
CDC9YDL164C CAT8P39113 1433 aa3.58□□□□□ -1.84
CDC9YDL164C MLP1Q02455 1875 aaKnown RBP3.58□□□□□ -1.84
CDC9YDL164C RPN13O13563 156 aa3.58□□□□□ -1.84
CDC9YDL164C PIS1P06197 220 aaKnown RBP3.58□□□□□ -1.84
CDC9YDL164C MRP21P38175 177 aa3.58□□□□□ -1.84
CDC9YDL164C FMP23P38231 175 aa3.58□□□□□ -1.84
CDC9YDL164C RRP3P38712 501 aaKnown RBP3.58□□□□□ -1.84
CDC9YDL164C YJL213WP40896 331 aa3.58□□□□□ -1.84
CDC9YDL164C COQ5P49017 307 aa3.58□□□□□ -1.84
CDC9YDL164C NRM1P53718 249 aa3.58□□□□□ -1.84
CDC9YDL164C SWP1Q02795 286 aa3.58□□□□□ -1.84
CDC9YDL164C YLR031WQ07978 186 aa3.58□□□□□ -1.84
CDC9YDL164C YLR361C-AQ3E795 98 aa3.58□□□□□ -1.84
CDC9YDL164C SNT2P53127 1403 aa3.57□□□□□ -1.84
CDC9YDL164C RPL15AP05748 204 aaKnown RBP3.57□□□□□ -1.84
CDC9YDL164C TCA17P32613 152 aa3.57□□□□□ -1.84
CDC9YDL164C PSA1P41940 361 aaKnown RBP3.57□□□□□ -1.84
CDC9YDL164C FLC3P53121 802 aa3.57□□□□□ -1.84
CDC9YDL164C TMA20P89886 181 aaPredicted RBP3.57□□□□□ -1.84
CDC9YDL164C YMR320WQ04897 101 aa3.57□□□□□ -1.84
CDC9YDL164C WIP1Q2V2P8 89 aa3.57□□□□□ -1.84
CDC9YDL164C IQG1Q12280 1495 aa3.57□□□□□ -1.84
CDC9YDL164C PMU1P36069 295 aa3.56□□□□□ -1.84
CDC9YDL164C SEN34P39707 275 aa3.56□□□□□ -1.84
CDC9YDL164C UFE1P41834 346 aa3.56□□□□□ -1.84
CDC9YDL164C COS6P53344 381 aa3.56□□□□□ -1.84
CDC9YDL164C YLR046CQ12253 270 aa3.56□□□□□ -1.84
CDC9YDL164C DRS2P39524 1355 aa3.56□□□□□ -1.84
CDC9YDL164C TRX3P25372 127 aa3.56□□□□□ -1.84
CDC9YDL164C POP8P38208 133 aa3.56□□□□□ -1.84
CDC9YDL164C IPI1P38803 334 aaPredicted RBP3.56□□□□□ -1.84
CDC9YDL164C RIO2P40160 425 aaKnown RBP3.56□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 14.8 ms