RNA–Protein interactions for RNA: YDL017W

CDC7, Transcript of DDK (Dbf4-dependent kinase) catalytic subunit, yeastyeast

Gene CDC7, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CDC7YDL017W SKP1P52286 194 aa6.19□□□□□ -1.42
CDC7YDL017W NSA1P53136 463 aaPredicted RBP6.19□□□□□ -1.42
CDC7YDL017W TY1A-DR1Q03856 440 aa6.19□□□□□ -1.42
CDC7YDL017W TY1A-ML1Q04706 440 aaKnown RBP6.19□□□□□ -1.42
CDC7YDL017W NOC4Q06512 552 aaPredicted RBP6.19□□□□□ -1.42
CDC7YDL017W TY1A-BRQ12217 440 aa6.19□□□□□ -1.42
CDC7YDL017W TY1A-NL2Q12470 440 aa6.19□□□□□ -1.42
CDC7YDL017W TY1A-GR2Q12485 440 aa6.19□□□□□ -1.42
CDC7YDL017W RPP1AP05318 106 aaPredicted RBP6.18□□□□□ -1.42
CDC7YDL017W RPS31P05759 152 aaKnown RBP6.18□□□□□ -1.42
CDC7YDL017W YFR010W-AP0C5N0 62 aa6.18□□□□□ -1.42
CDC7YDL017W RPS16AP0CX51 143 aaKnown RBP6.18□□□□□ -1.42
CDC7YDL017W RPS16BP0CX52 143 aaKnown RBP6.18□□□□□ -1.42
CDC7YDL017W SSO2P39926 295 aa6.18□□□□□ -1.42
CDC7YDL017W YIR035CP40579 254 aa6.18□□□□□ -1.42
CDC7YDL017W MOB2P43563 287 aa6.18□□□□□ -1.42
CDC7YDL017W YJL016WP47072 561 aa6.18□□□□□ -1.42
CDC7YDL017W ADO1P47143 340 aaKnown RBP6.18□□□□□ -1.42
CDC7YDL017W SOK2P53438 785 aaPredicted RBP6.18□□□□□ -1.42
CDC7YDL017W YDR209CQ03480 137 aa6.18□□□□□ -1.42
CDC7YDL017W YDR387CQ04162 555 aa6.18□□□□□ -1.42
CDC7YDL017W RTT103Q05543 409 aa6.18□□□□□ -1.42
CDC7YDL017W MRX9Q07349 420 aaKnown RBP6.18□□□□□ -1.42
CDC7YDL017W TEL1P38110 2787 aa6.17□□□□□ -1.42
CDC7YDL017W RPL30P14120 105 aaKnown RBP6.17□□□□□ -1.42
CDC7YDL017W STE4P18851 423 aa6.17□□□□□ -1.42
CDC7YDL017W PDC2P32896 925 aa6.17□□□□□ -1.42
CDC7YDL017W MRT4P33201 236 aaKnown RBP6.17□□□□□ -1.42
CDC7YDL017W YBR096WP38256 230 aa6.17□□□□□ -1.42
CDC7YDL017W LSM12P38828 187 aaKnown RBP6.17□□□□□ -1.42
CDC7YDL017W ASP1P38986 381 aaPredicted RBP6.17□□□□□ -1.42
CDC7YDL017W GNA1P43577 159 aaPredicted RBP6.17□□□□□ -1.42
CDC7YDL017W GWT1P47026 490 aa6.17□□□□□ -1.42
CDC7YDL017W PBP1P53297 722 aaKnown RBP6.17□□□□□ -1.42
CDC7YDL017W YNR048WP53740 393 aa6.17□□□□□ -1.42
CDC7YDL017W ALG9P53868 555 aaKnown RBP6.17□□□□□ -1.42
CDC7YDL017W CAB5Q03941 241 aa6.17□□□□□ -1.42
CDC7YDL017W PIN2Q12057 282 aa6.17□□□□□ -1.42
CDC7YDL017W CSF1Q12150 2958 aa6.17□□□□□ -1.42
CDC7YDL017W TDH3P00359 332 aaKnown RBP RIP-Chip data6.16□□□□□ -1.42not detected
CDC7YDL017W CDC28P00546 298 aaKnown RBP6.16□□□□□ -1.42
CDC7YDL017W REP2P03872 296 aa6.16□□□□□ -1.42
CDC7YDL017W QCR2P07257 368 aa6.16□□□□□ -1.42
CDC7YDL017W MCM1P11746 286 aa6.16□□□□□ -1.42
CDC7YDL017W MIR1P23641 311 aaKnown RBP6.16□□□□□ -1.42
CDC7YDL017W CPR3P25719 182 aa6.16□□□□□ -1.42
CDC7YDL017W RPD3P32561 433 aa6.16□□□□□ -1.42
CDC7YDL017W YND1P40009 630 aa6.16□□□□□ -1.42
CDC7YDL017W YJR011CP47086 261 aaPredicted RBP6.16□□□□□ -1.42
CDC7YDL017W UFD1P53044 361 aa6.16□□□□□ -1.42
CDC7YDL017W PNC1P53184 216 aaKnown RBP6.16□□□□□ -1.42
CDC7YDL017W ATG4P53867 494 aa6.16□□□□□ -1.42
CDC7YDL017W ACT1P60010 375 aaKnown RBP6.16□□□□□ -1.42
CDC7YDL017W MRP51Q02950 344 aa6.16□□□□□ -1.42
CDC7YDL017W SPR28Q04921 423 aa6.16□□□□□ -1.42
CDC7YDL017W VAM3Q12241 283 aa6.16□□□□□ -1.42
CDC7YDL017W HUT1Q12520 339 aa6.16□□□□□ -1.42
CDC7YDL017W YHR213W-AQ8TGT4 77 aa6.16□□□□□ -1.42
CDC7YDL017W UBA3Q99344 299 aa6.16□□□□□ -1.42
CDC7YDL017W GAL1P04385 528 aa6.15□□□□□ -1.42
CDC7YDL017W CBT1P36038 271 aaPredicted RBP6.15□□□□□ -1.42
CDC7YDL017W FIG1P38224 298 aa6.15□□□□□ -1.42
CDC7YDL017W FAT1P38225 669 aa6.15□□□□□ -1.42
CDC7YDL017W YBR197CP38306 217 aa6.15□□□□□ -1.42
CDC7YDL017W COS8P38723 381 aa6.15□□□□□ -1.42
CDC7YDL017W PET100P38958 111 aa6.15□□□□□ -1.42
CDC7YDL017W YIL169CP40442 995 aa6.15□□□□□ -1.42
CDC7YDL017W PHO23P50947 330 aa6.15□□□□□ -1.42
CDC7YDL017W YGL117WP53133 265 aa6.15□□□□□ -1.42
CDC7YDL017W TNA1P53322 534 aa6.15□□□□□ -1.42
CDC7YDL017W EST3Q03096 181 aa6.15□□□□□ -1.42
CDC7YDL017W THI74Q04083 370 aa6.15□□□□□ -1.42
CDC7YDL017W COQ11Q05892 277 aa6.15□□□□□ -1.42
CDC7YDL017W RRT7Q07829 113 aa6.15□□□□□ -1.42
CDC7YDL017W USB1Q12208 290 aaKnown RBP6.15□□□□□ -1.42
CDC7YDL017W ISN1Q99312 450 aa6.15□□□□□ -1.42
CDC7YDL017W SSA3P09435 649 aaKnown RBP6.15□□□□□ -1.43
CDC7YDL017W CNB1P25296 175 aa6.15□□□□□ -1.43
CDC7YDL017W PEX4P29340 183 aa6.15□□□□□ -1.43
CDC7YDL017W BLM10P43583 2143 aa6.15□□□□□ -1.43
CDC7YDL017W SRB7P47822 140 aa6.15□□□□□ -1.43
CDC7YDL017W BUL1P48524 976 aa6.15□□□□□ -1.43
CDC7YDL017W HOL1P53389 586 aa6.15□□□□□ -1.43
CDC7YDL017W CWC25P53854 179 aaKnown RBP6.15□□□□□ -1.43
CDC7YDL017W SRP1Q02821 542 aaKnown RBP6.15□□□□□ -1.43
CDC7YDL017W ODC1Q03028 310 aa6.15□□□□□ -1.43
CDC7YDL017W BER1Q06688 274 aaKnown RBP6.15□□□□□ -1.43
CDC7YDL017W YDL086WQ07505 273 aa6.15□□□□□ -1.43
CDC7YDL017W THI72Q08579 599 aa6.15□□□□□ -1.43
CDC7YDL017W YCT1Q12235 531 aa6.15□□□□□ -1.43
CDC7YDL017W IZH2Q12442 317 aa6.15□□□□□ -1.43
CDC7YDL017W CBP6P07253 162 aaPredicted RBP6.14□□□□□ -1.43
CDC7YDL017W YLL053CP0CD98 152 aa6.14□□□□□ -1.43
CDC7YDL017W MGE1P38523 228 aa6.14□□□□□ -1.43
CDC7YDL017W LAG1P38703 411 aa6.14□□□□□ -1.43
CDC7YDL017W SNN1P48232 102 aa6.14□□□□□ -1.43
CDC7YDL017W GNP1P48813 663 aa6.14□□□□□ -1.43
CDC7YDL017W MRPL19P53875 158 aa6.14□□□□□ -1.43
CDC7YDL017W HAS1Q03532 505 aaKnown RBP6.14□□□□□ -1.43
CDC7YDL017W CAC2Q04199 468 aa6.14□□□□□ -1.43
Retrieved 100 of 5,963 RNA–protein pairs in 13.5 ms