RNA–Protein interactions for RNA: YCR001W

YCR001W, Transcript of Dubious open reading frame, yeast

Gene YCR001W, Length 315 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCR001W	YCR001W	MRPL39	P36533	70 aa		0.88	□□□□□ -2.27
YCR001W	YCR001W	MRX3	P38172	270 aa		0.88	□□□□□ -2.27
YCR001W	YCR001W	PRS2	P38620	318 aa	Known RBP	0.88	□□□□□ -2.27
YCR001W	YCR001W	SMB1	P40018	196 aa	Known RBP	0.88	□□□□□ -2.27
YCR001W	YCR001W	AGE2	P40529	298 aa		0.88	□□□□□ -2.27
YCR001W	YCR001W	RMR1	P53060	241 aa		0.88	□□□□□ -2.27
YCR001W	YCR001W	YNR062C	P53748	327 aa		0.88	□□□□□ -2.27
YCR001W	YCR001W	SPG4	Q04438	115 aa		0.88	□□□□□ -2.27
YCR001W	YCR001W	YOR186W	Q08560	144 aa		0.88	□□□□□ -2.27
YCR001W	YCR001W	YPL257W	Q08974	193 aa		0.88	□□□□□ -2.27
YCR001W	YCR001W	COX2	P00410	251 aa		0.87	□□□□□ -2.27
YCR001W	YCR001W	MRP1	P10662	321 aa	Known RBP	0.87	□□□□□ -2.27
YCR001W	YCR001W	GRX2	P17695	143 aa	Known RBP	0.87	□□□□□ -2.27
YCR001W	YCR001W	YHR180W	P38868	163 aa		0.87	□□□□□ -2.27
YCR001W	YCR001W	YJR079W	P47126	109 aa		0.87	□□□□□ -2.27
YCR001W	YCR001W	SML1	Q04964	104 aa		0.87	□□□□□ -2.27
YCR001W	YCR001W	YPR098C	Q06089	161 aa		0.87	□□□□□ -2.27
YCR001W	YCR001W	ATG39	Q06159	398 aa		0.87	□□□□□ -2.27
YCR001W	YCR001W	YLR162W	Q06235	118 aa		0.87	□□□□□ -2.27
YCR001W	YCR001W	ARR2	Q06597	130 aa		0.87	□□□□□ -2.27
YCR001W	YCR001W	YPR172W	Q06608	200 aa		0.87	□□□□□ -2.27
YCR001W	YCR001W	RPL24A	P04449	155 aa	Known RBP	0.86	□□□□□ -2.27
YCR001W	YCR001W	SNA3	P14359	133 aa		0.86	□□□□□ -2.27
YCR001W	YCR001W	SGE1	P33335	543 aa		0.86	□□□□□ -2.27
YCR001W	YCR001W	GOS1	P38736	223 aa		0.86	□□□□□ -2.27
YCR001W	YCR001W	YIL001W	P40560	513 aa		0.86	□□□□□ -2.27
YCR001W	YCR001W	EMC2	P47133	292 aa	Known RBP	0.86	□□□□□ -2.27
YCR001W	YCR001W	SNZ2	P53824	298 aa		0.86	□□□□□ -2.27
YCR001W	YCR001W	HEM25	Q07534	307 aa		0.86	□□□□□ -2.27
YCR001W	YCR001W	FLO9	P39712	1322 aa		0.86	□□□□□ -2.27
YCR001W	YCR001W	PET9	P18239	318 aa	Known RBP	0.85	□□□□□ -2.27
YCR001W	YCR001W	HOM6	P31116	359 aa	Known RBP	0.85	□□□□□ -2.27
YCR001W	YCR001W	YPT52	P36018	234 aa	Known RBP	0.85	□□□□□ -2.27
YCR001W	YCR001W	YBR096W	P38256	230 aa		0.85	□□□□□ -2.27
YCR001W	YCR001W	SVP26	P38869	228 aa		0.85	□□□□□ -2.27
YCR001W	YCR001W	RPL13B	P40212	199 aa	Known RBP	0.85	□□□□□ -2.27
YCR001W	YCR001W	JHD2	P47156	728 aa	Predicted RBP	0.85	□□□□□ -2.27
YCR001W	YCR001W	ERV25	P54837	211 aa	Known RBP	0.85	□□□□□ -2.27
YCR001W	YCR001W	YDR209C	Q03480	137 aa		0.85	□□□□□ -2.27
YCR001W	YCR001W	ADH6	Q04894	360 aa	Known RBP	0.85	□□□□□ -2.27
YCR001W	YCR001W	COX20	Q04935	205 aa		0.85	□□□□□ -2.27
YCR001W	YCR001W	RPL13A	Q12690	199 aa	Predicted RBP	0.85	□□□□□ -2.27
YCR001W	YCR001W	IPP1	P00817	287 aa	Known RBP	0.84	□□□□□ -2.27
YCR001W	YCR001W	DAL82	P21705	255 aa		0.84	□□□□□ -2.27
YCR001W	YCR001W	UPS2	P35200	230 aa		0.84	□□□□□ -2.27
YCR001W	YCR001W	YAR1	P46683	200 aa		0.84	□□□□□ -2.27
YCR001W	YCR001W	NUP57	P48837	541 aa		0.84	□□□□□ -2.27
YCR001W	YCR001W	TOS8	P53147	276 aa		0.84	□□□□□ -2.27
YCR001W	YCR001W	ERV29	P53337	310 aa		0.84	□□□□□ -2.27
YCR001W	YCR001W	RRS1	Q08746	203 aa	Known RBP	0.84	□□□□□ -2.27
YCR001W	YCR001W	HTL1	Q9URQ5	78 aa		0.84	□□□□□ -2.27
YCR001W	YCR001W	PET100	P38958	111 aa		0.83	□□□□□ -2.28
YCR001W	YCR001W	YAR068W	P39564	161 aa		0.83	□□□□□ -2.28
YCR001W	YCR001W	GLG2	P47011	380 aa		0.83	□□□□□ -2.28
YCR001W	YCR001W	YJR056C	P47115	236 aa		0.83	□□□□□ -2.28
YCR001W	YCR001W	YNL046W	P53956	172 aa		0.83	□□□□□ -2.28
YCR001W	YCR001W	RIO1	Q12196	484 aa	Known RBP	0.83	□□□□□ -2.28
YCR001W	YCR001W	POL30	P15873	258 aa	Known RBP	0.82	□□□□□ -2.28
YCR001W	YCR001W	MRPL37	P36532	105 aa		0.82	□□□□□ -2.28
YCR001W	YCR001W	RRF1	P38771	230 aa		0.82	□□□□□ -2.28
YCR001W	YCR001W	RPA43	P46669	326 aa		0.82	□□□□□ -2.28
YCR001W	YCR001W	USE1	P53146	245 aa		0.82	□□□□□ -2.28
YCR001W	YCR001W	NIP7	Q08962	181 aa	Known RBP	0.82	□□□□□ -2.28
YCR001W	YCR001W	TPO4	Q12256	659 aa		0.82	□□□□□ -2.28
YCR001W	YCR001W	GPA2	P10823	449 aa		0.81	□□□□□ -2.28
YCR001W	YCR001W	ECM33	P38248	429 aa	Known RBP	0.81	□□□□□ -2.28
YCR001W	YCR001W	RPF1	P38805	295 aa	Known RBP	0.81	□□□□□ -2.28
YCR001W	YCR001W	TIR3	P40552	269 aa		0.81	□□□□□ -2.28
YCR001W	YCR001W	RPL33B	P41056	107 aa	Known RBP	0.81	□□□□□ -2.28
YCR001W	YCR001W	RHO3	Q00245	231 aa	Known RBP	0.81	□□□□□ -2.28
YCR001W	YCR001W	YCT1	Q12235	531 aa		0.81	□□□□□ -2.28
YCR001W	YCR001W	YOR020W-A	Q3E824	90 aa		0.81	□□□□□ -2.28
YCR001W	YCR001W	RSR1	P13856	272 aa		0.8	□□□□□ -2.28
YCR001W	YCR001W	FCY2	P17064	533 aa		0.8	□□□□□ -2.28
YCR001W	YCR001W	RNA15	P25299	296 aa	Predicted RBP	0.8	□□□□□ -2.28
YCR001W	YCR001W	MEP1	P40260	492 aa		0.8	□□□□□ -2.28
YCR001W	YCR001W	HAM1	P47119	197 aa	Known RBP	0.8	□□□□□ -2.28
YCR001W	YCR001W	MSA1	Q08471	629 aa		0.8	□□□□□ -2.28
YCR001W	YCR001W	SNU23	Q12368	194 aa	Predicted RBP	0.8	□□□□□ -2.28
YCR001W	YCR001W	QCR8	P08525	94 aa		0.79	□□□□□ -2.28
YCR001W	YCR001W	RPS5	P26783	225 aa	Known RBP	0.79	□□□□□ -2.28
YCR001W	YCR001W	MEI4	P29467	408 aa		0.79	□□□□□ -2.28
YCR001W	YCR001W	TCD1	P38756	429 aa		0.79	□□□□□ -2.28
YCR001W	YCR001W	YHR127W	P38833	243 aa	Known RBP	0.79	□□□□□ -2.28
YCR001W	YCR001W	BFR1	P38934	470 aa	Known RBP RIP-Chip data	0.79	□□□□□ -2.28	not detected
YCR001W	YCR001W	CDC8	P00572	216 aa		0.78	□□□□□ -2.28
YCR001W	YCR001W	ERD2	P18414	219 aa		0.78	□□□□□ -2.28
YCR001W	YCR001W	YBR063C	P38083	404 aa		0.78	□□□□□ -2.28
YCR001W	YCR001W	BIG1	P38813	335 aa		0.78	□□□□□ -2.28
YCR001W	YCR001W	ICE2	P40499	491 aa		0.78	□□□□□ -2.28
YCR001W	YCR001W	CAT5	P41735	233 aa		0.78	□□□□□ -2.28
YCR001W	YCR001W	SEI1	Q06058	285 aa		0.78	□□□□□ -2.28
YCR001W	YCR001W	SDO1	Q07953	250 aa	Known RBP	0.78	□□□□□ -2.28
YCR001W	YCR001W	CSM4	Q08955	156 aa		0.78	□□□□□ -2.28
YCR001W	YCR001W	VAR1	P02381	398 aa		0.77	□□□□□ -2.29
YCR001W	YCR001W	CPA1	P07258	411 aa	Known RBP	0.77	□□□□□ -2.29
YCR001W	YCR001W	FZF1	P32805	299 aa		0.77	□□□□□ -2.29
YCR001W	YCR001W	RSM25	P40496	264 aa		0.77	□□□□□ -2.29
YCR001W	YCR001W	ILM1	P47155	203 aa		0.77	□□□□□ -2.29
YCR001W	YCR001W	BOL2	P53082	120 aa		0.77	□□□□□ -2.29

Retrieved 100 of 5,963 RNA–protein pairs in 64.5 ms